Os04g0474800

From RiceWiki
Revision as of 11:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0474800| Description = Similar to Amygdalin hydrolase isoform AH I precursor (EC 3.2.1.117)| Version = NM_001059605.1 GI:115458939 GeneID:43...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0474800

Description

Similar to Amygdalin hydrolase isoform AH I precursor (EC 3.2.1.117)

Version

NM_001059605.1 GI:115458939 GeneID:4336145

Length

3128 bp

Definition

Oryza sativa Japonica Group Os04g0474800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24146143..24149270

Sequence Coding Region

24146265..24146433,24146526..24146634,24146798..24146900,24146991..24147022,24147234..24147451
,24147532..24147647,24148265..24148520,24148929..24149016,24149138..24149234

Expression

GEO Profiles:Os04g0474800

Genome Context

<gbrowseImage1> name=NC_008397:24146143..24149270 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24146143..24149270 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aaattcactgtcatggcagatggaagtctgaggggtggagtcaacaaagaaggcataaagtactacaataatttgatcaatgagctattatcgaaaggggtgcaaccgtttattacccttttccactgggactcacctcaggcgttggaagataaatataatggatttcttagccctaatatcataaatgactttaaggactatgctgaaatctgcttcaaggagtttggtgacagagtgaaaaattggatcaccttcaatgagccttggactttctgctctaatggctatgcaactggcctgtttgcaccaggccgttgttcgccctgggagaagggaaattgcagtgttggagattcaggaagggagccttacactgcatgccatcatcaactacttgcccacgcggaaactgttcggttgtacaaagcgaaatatcaggccttacaaaaagggaagattggaataactctggtctcgcactggtttgttcccttctcccgctccaaatccaacgatgatgctgcaaagcgtgctatagacttcatgtttggatggtttatggatcccctcattagaggcgactaccccctaagcatgagaggattggttgggaatcgcttgccacagttcactaaagaacagtctaagttggtcaagggtgcatttgactttattggacttaactactacactgcgaactatgctgataaccttcctccatcaaatggccttaacaacagctataccaccgattctcgagctaatcttaccggtgtacgaaatggcatccccataggaccgcaggctgcttcaccttggctttacgtctaccctcaaggcttccgtgacttgctactttatgttaaggagaactatggcaatcctaccgtctacatcactgaaaatggcgttgatgaattcaacaataagaccttaccactccaagaagccttgaaggatgacgctaggatagaatactaccacaagcacctcctttccctgctaagtgctataagggatggagcaaacgtgaagggatactttgcatggtcgctgcttgataacttcgagtggtcgaacggctacacagttcgatttgggataaacttcgtagattacaatgacggaaggaagagataccccaagaactctgcccattggttcaagaagttcctcctgaaatga</cdnaseq>

Protein Sequence

<aaseq>KFTVMADGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWD SPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYATGLF APGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITLVS HWFVPFSRSKSNDDAAKRAIDFMFGWFMDPLIRGDYPLSMRGLVGNRLPQFTKEQSKL VKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQAASPWLY VYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLS LLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKF LLK</aaseq>

Gene Sequence

<dnaseqindica>2838..3006#2637..2745#2371..2473#2249..2280#1820..2037#1624..1739#751..1006#255..342#37..133#ttggtcatactccaagttgatggcaccaaacattgaaaattcactgtcatggcagatggaagtctgaggggtggagtcaacaaagaaggcataaagtactacaataatttgatcaatgagctattatcgaaaggtacgcattttccagtctacagtgtttagttccaagttcagtggctagatgcaaattagttccactccagaagtccagatattcttttattcaagatgcaaataaccttatacatttgcaggggtgcaaccgtttattacccttttccactgggactcacctcaggcgttggaagataaatataatggatttcttagccctaatatcatgtatgtcaacaattcttctgcttcaatacatcactagttataccttgataggttgaaatggaaactggtcaggttaataaacagactcagtaagataggagagtgaaatttaaactaaatgtgacaacatcaattaacctgaccatcactgtgcatacccattaaactgccgaagactcctatttcaatttcattggcttttggagctttctcctcaatttccttgtgaataacactaattgaaggtaagttgggatgtgtttttctttcgacagcattaaacccctttattggcacttacgccacccacagtagtactctcttcctatactattttcagctaaaatgtcaagagttgcctacagtgaaaattttcttatgtttactgtttgtgaaaaactgttgcagaaatgactttaaggactatgctgaaatctgcttcaaggagtttggtgacagagtgaaaaattggatcaccttcaatgagccttggactttctgctctaatggctatgcaactggcctgtttgcaccaggccgttgttcgccctgggagaagggaaattgcagtgttggagattcaggaagggagccttacactgcatgccatcatcaactacttgcccacgcggaaactgttcggttgtacaaagcgaaatatcaggtcactgaagaatccctttgagcacttgcaattcatccatgacaatgagttaaatcaaagatctgcaaatttggttttgataatccatgcttagcatttagttccagttcggtcctggtggtagaatttgttagtacatccattagcaaattactttagtaacttcagctatctgtttaaaatatcacatatcatggattggattcctatcatatcaacagacatgtgcatatactagttactttcaaaaagaatgattttactgtccttacggatcgaatactaatacatttaaaccttatcaattaaatacctgaatctgaagatgatctttgtagaaagagtgattttacagtccttgagtgatgccaggtggtaccacattttataatgtaagaggtaccaaaatttataccagaaaatgtagtacctcaggaccgtaaaaatttctcttgtagatatgtattacttgttaattatagtcctatggaacgagaaaagctctggctgcaagagaaagaaagcagaacaactagaatacattgccaaatcaaaggattggagttcagcatttacacaaccactcacttgaacaatgaaatccttcataaatgcaggccttacaaaaagggaagattggaataactctggtctcgcactggtttgttcccttctcccgctccaaatccaacgatgatgctgcaaagcgtgctatagacttcatgtttggatggtaaattctgtcacacattatttcatcattgaagttgttaaaacatgaaagaagtcttcaacaatgaatttcccttctaggtttatggatcccctcattagaggcgactaccccctaagcatgagaggattggttgggaatcgcttgccacagttcactaaagaacagtctaagttggtcaagggtgcatttgactttattggacttaactactacactgcgaactatgctgataaccttcctccatcaaatggccttaacaacagctataccaccgattctcgagctaatcttaccggtgagtcaatatgagtttatatttctattttaaattcatagtgtttgcaacattgaaatacaaagatatggcaagcttctagcatataatatccattagactgtagcatttctgataagcattttggtcagcttatgtcatagcctctgttgcacaatacctatctgtttcagacgggtcaatatatgctaacctatgctgattgtgccaggtgtacgaaatggcatccccataggaccgcaggtaactccatactttgtcctccacacaaaataaattaatagtaaatagttaaggtgagatattgaattttgtaaaatggcatgtatgtaggctgcttcaccttggctttacgtctaccctcaaggcttccgtgacttgctactttatgttaaggagaactatggcaatcctaccgtctacatcactgaaaatggtaagtctccgatactacggtaacacattctaatttttaaattaagtcagcaatgaactcctatggcataaatatttttcttctcctagcttcttgaagaaataaaatatatattctctaaaagttaatgaatctaactgattttttattgctgcatcttaaggcgttgatgaattcaacaataagaccttaccactccaagaagccttgaaggatgacgctaggatagaatactaccacaagcacctcctttccctgctaagtgctataaggtctgaactctgaactattgatcatagacccatttctgagtagggttcttcagatgctagttgacaatgcattactccatatgccttcacagggatggagcaaacgtgaagggatactttgcatggtcgctgcttgataacttcgagtggtcgaacggctacacagttcgatttgggataaacttcgtagattacaatgacggaaggaagagataccccaagaactctgcccattggttcaagaagttcctcctgaaatgataaaaaagcaccattgcactcattgcttttctcattgaataataaaagagtatatgttttgcgtgaatttggtacaagagatggaagtaatccagttaaataataaatccctctcttactgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0474800, RefSeq:Os04g0474800