Os04g0476000

From RiceWiki
Revision as of 11:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0476000| Description = Tetratricopeptide-like helical domain containing protein| Version = NM_001059612.2 GI:297602908 GeneID:4336152| Leng...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0476000

Description

Tetratricopeptide-like helical domain containing protein

Version

NM_001059612.2 GI:297602908 GeneID:4336152

Length

2375 bp

Definition

Oryza sativa Japonica Group Os04g0476000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24225154..24227528

Sequence Coding Region

24225154..24225808,24226124..24226257,24226758..24226940,24227355..24227528

Expression

GEO Profiles:Os04g0476000

Genome Context

<gbrowseImage1> name=NC_008397:24225154..24227528 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24225154..24227528 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccgcgagccgcacctggccgcccccgaccccctccccgccgcccttctcctcccgcccccgcgtcgtgggccccccgccgccgccgccgtccgaccctccgccgccgccgccgccccaccaccaccaccaccatcgccgccgccaccgccactccaagaaaccgaagcctcagcctcagcctcaacctccgcctccgccgctgccgccgcagcagcagcagcaagagcccgccgccggcgccggcgccggcgcggacttctccgcgctgccgccggagctcgtgcacagggcgctggcggccgcgggggcgtcggacgtcgcggcggcaagccgggcgtgccgcgcgtggcgggacgcgctgcggccgctccgggaggccgcggcgctgcacgcgcgggggcgacgcgtcaagcacgcggcaggcgcggccgcggccgcgggcgccgaggggcggaaggcggagaggcagcgcgcgctggggctgttccagcgcgcggcgaggctggggtccgcggcggcgatggtggacgccgggctgatgtgctgggaggaagggcggcgtgacgaggcggtggggtgctaccagaaggcggcggagctagggcaccccgtcgggatgtgcaatctcggcgtctcctacctagaagctgatccacccaaggctgaggaagctgttagatggttttatccagctgcggctgctggcaatgctcgtgctcaatacaacctgggcctttgcttgcagaatgggaaaggaatcaagcgtaaccagcgggaagctgcaaaatggtacctgcgagctgcagagggaggaaatgtgcgagccatgtacaacatttccttgtgctacaactatggtgaaggattttcacaggatcaagtgcgttcaaagaggtggctgcaattagctgctgattgcggtcacaagaaagctctttatgaatgtggtattaaactttgtgcggcaggagacaaggtgaggtctcttatgtatctagagttggcgacgcgccgtggagaagctgctgcctcacatatgagggatgtaatacttgaatcactttcccttgtgaatgcgcaacgtgccctgtcagatgcggataaatggagaccaagagcactgtataccagaagatga</cdnaseq>

Protein Sequence

<aaseq>MDAASRTWPPPTPSPPPFSSRPRVVGPPPPPPSDPPPPPPPHHH HHHRRRHRHSKKPKPQPQPQPPPPPLPPQQQQQEPAAGAGAGADFSALPPELVHRALA AAGASDVAAASRACRAWRDALRPLREAAALHARGRRVKHAAGAAAAAGAEGRKAERQR ALGLFQRAARLGSAAAMVDAGLMCWEEGRRDEAVGCYQKAAELGHPVGMCNLGVSYLE ADPPKAEEAVRWFYPAAAAGNARAQYNLGLCLQNGKGIKRNQREAAKWYLRAAEGGNV RAMYNISLCYNYGEGFSQDQVRSKRWLQLAADCGHKKALYECGIKLCAAGDKVRSLMY LELATRRGEAAASHMRDVILESLSLVNAQRALSDADKWRPRALYTRR</aaseq>

Gene Sequence

<dnaseqindica>1..655#971..1104#1605..1787#2202..2375#atggacgccgcgagccgcacctggccgcccccgaccccctccccgccgcccttctcctcccgcccccgcgtcgtgggccccccgccgccgccgccgtccgaccctccgccgccgccgccgccccaccaccaccaccaccatcgccgccgccaccgccactccaagaaaccgaagcctcagcctcagcctcaacctccgcctccgccgctgccgccgcagcagcagcagcaagagcccgccgccggcgccggcgccggcgcggacttctccgcgctgccgccggagctcgtgcacagggcgctggcggccgcgggggcgtcggacgtcgcggcggcaagccgggcgtgccgcgcgtggcgggacgcgctgcggccgctccgggaggccgcggcgctgcacgcgcgggggcgacgcgtcaagcacgcggcaggcgcggccgcggccgcgggcgccgaggggcggaaggcggagaggcagcgcgcgctggggctgttccagcgcgcggcgaggctggggtccgcggcggcgatggtggacgccgggctgatgtgctgggaggaagggcggcgtgacgaggcggtggggtgctaccagaaggcggcggagctagggcaccccgtcgggatgtgcaatctcggcgtctcctacctagaaggtacccccggattttggcctacgggatcaatagctttcttggatactcgatcgagactgtagccgaaagctttgacgaatcttaggacgaattgggtttgctcacagcatgattagaaccattcgtgtttagggcaaagttttgaccttgctctgtcgctggcgtttgtctttttgtgattcttttagtaacctttaactcaagtctgattctaaactagcaggggagaaacctactgggttgttgttgttgctgcaatcatattcttcatctcaacgaattgcaactgattgttgctgccaaatcattttttagctgatccacccaaggctgaggaagctgttagatggttttatccagctgcggctgctggcaatgctcgtgctcaatacaacctgggcctttgcttgcagaatgggaaaggaatcaagcgtaaccagcgggaagctgtaagatgcctcctcttgttacatttacatctgcatatcgcaaattttccccgaaacagaaatacgcagttactatagatgtatccaattgttgaaccagcatcatttattctttgttgtggtatcttgtttctactcctacaagctatggactgtatgaactaaattatagtcaggcaatttagagctgtacgatttagggataatttaccaatttatcagctccgttgtggttttttagcgagttttattttgatctcacattccattgtttacaatgtgatctatcaaaactgagataaccagagtttttgacagaaaggagctttttgatctggttgggtttccctaccgatgtactcataattgcaccatcatgatcagtctgaatttgctaaattggcggtctcaagattaccaccactgtagcgcacaaagttgactgtgtgctttattgccttgaatctgcttgtttaaaataaggaactttgcaaatgcaggcaaaatggtacctgcgagctgcagagggaggaaatgtgcgagccatgtacaacatttccttgtgctacaactatggtgaaggattttcacaggatcaagtgcgttcaaagaggtggctgcaattagctgctgattgcggtcacaagaaagctctttatgaatgtggtattaaactttgtgcggtatgtcattccatttcacctaatgaatgaatcatctaactgtgtggaaacaacgtattaattatatattccttttctgttagccaccatgcagttcttccaattgcacattttagtgcataagtttaggccatgtaataaggtaagatatgtaaatacttgtcataacggtttggttaagggcgtttcaagaaacagaatacggtgtgtgtgctattttaaattttaaaaagccaatatctttaataacagaattagtttgaaattgccaaaaacttgtatgtttgtactgaagtagtatcagctgtataacttatgtcatcgtcgttcgtactattcctactgcttcatcaatgttggcgtgttatgcatttacttatgccttttttttatgatgattcttctcttatttaggcaggagacaaggtgaggtctcttatgtatctagagttggcgacgcgccgtggagaagctgctgcctcacatatgagggatgtaatacttgaatcactttcccttgtgaatgcgcaacgtgccctgtcagatgcggataaatggagaccaagagcactgtataccagaagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0476000, RefSeq:Os04g0476000