Os04g0479800

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Revision as of 11:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0479800| Description = Cyclin-like F-box domain containing protein| Version = NM_001059632.1 GI:115458993 GeneID:4336173| Length = 3410 bp|...")
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Gene Name

Os04g0479800

Description

Cyclin-like F-box domain containing protein

Version

NM_001059632.1 GI:115458993 GeneID:4336173

Length

3410 bp

Definition

Oryza sativa Japonica Group Os04g0479800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24397370..24400779

Sequence Coding Region

24397606..24397696,24398136..24398251,24398928..24399746,24399935..24400090,24400187..24400561

Expression

GEO Profiles:Os04g0479800

Genome Context

<gbrowseImage1> name=NC_008397:24397370..24400779 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24397370..24400779 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggatgttggcgctgaacgggctcatgtccctgcggcgcgaccgccggcggcggcggcggcatcaccggccgcaaatccgagcgcgctgtgggcttattgcctcaacgggtaaaagaaagacatcaccctgtcaacaagatgactatgatggtgattctcaagctggcaaaataatgagaaattcaatcccagaccttcctgaggacatattgtttcgtatacagtcctttatgtcaatgcgtgaagctgctcgtgctgcttgcgtatctcgtgcttttctacattcctggaggtgtcatcccaatcttatctttaataaagatacgattgtcttgaagagaaatgcgtttggagagaatttccacggaaaaattgggcgcattctcaggaaccactcaggcattagcttgaaaacgttccagcttgactacagtggtatgtgtgggttcgatggcactagttatcttgacagttggcttcagattgctcttaaaccagagattgaagaactcaccctttttttgcctgaaacaaacaaacaatacagcttcccatgctcacttttatctgatggggtccgagactcacttcggtacattaaacttcgatgttgtgccctccatcccacacctgaacttggccccttgagaaacctatcaaatctgcatctgttgtatgtgagcattacatgggctgagttagagtgccttctttccaactctcttgctctggagcatttagagctcaatcattgcaaggggataatttgcctgaagataccttgcaccctgcagcagctcagcagccttaatgtcgttgaatgctcaggcttgaaagtgatagagagcaaagctccaaatctctctagtctatttgttagaggatccagggtaaacttctcccttgtagaaacattgcaaataaataagctagacatgggacatgcaatctgtgatgctcgggccaagctgccatccattatgccaaatcttgaaactcttgtcattgaatcggggcatgaggtggttgatgcaccaatgctgcctaccaaattcctctaccttaagcacctgaccattcatgtgataacaggatcgaccatttcccagccatatgactatttctctctggtttcttttattgatgcgtctccgtccttggagactttgatattaaatgtgactcaggtacgtatggtgcatgaatcgattttcacggattcacaactgagacacatccctggacaccgccatggccacctcaagagtgtgaagatcactggtttcagctctgcgaagagcttggtggaactgacatgttatatcctcaataatgcggtgtcacttgagtgtcttacattggataccatttatggtcctaggtgtgatcaagataagtataggcggtgttttcccatgatagatggtgttctcacggatgctccaagagggcttgcagctatcagaacatacattgaggataaagttccatctacagttaatttgactgttctggaaccttgcagccggtgccatgttagaagaagagggtga</cdnaseq>

Protein Sequence

<aaseq>MGMLALNGLMSLRRDRRRRRRHHRPQIRARCGLIASTGKRKTSP CQQDDYDGDSQAGKIMRNSIPDLPEDILFRIQSFMSMREAARAACVSRAFLHSWRCHP NLIFNKDTIVLKRNAFGENFHGKIGRILRNHSGISLKTFQLDYSGMCGFDGTSYLDSW LQIALKPEIEELTLFLPETNKQYSFPCSLLSDGVRDSLRYIKLRCCALHPTPELGPLR NLSNLHLLYVSITWAELECLLSNSLALEHLELNHCKGIICLKIPCTLQQLSSLNVVEC SGLKVIESKAPNLSSLFVRGSRVNFSLVETLQINKLDMGHAICDARAKLPSIMPNLET LVIESGHEVVDAPMLPTKFLYLKHLTIHVITGSTISQPYDYFSLVSFIDASPSLETLI LNVTQVRMVHESIFTDSQLRHIPGHRHGHLKSVKITGFSSAKSLVELTCYILNNAVSL ECLTLDTIYGPRCDQDKYRRCFPMIDGVLTDAPRGLAAIRTYIEDKVPSTVNLTVLEP CSRCHVRRRG</aaseq>

Gene Sequence

<dnaseqindica>237..327#767..882#1559..2377#2566..2721#2818..3192#ctcccctcttcccaattttccatacctaatacgtagcgtttggttatagctttagctccgcccgccgccgccgccgcctgcgcgaagttgagttcaaaaccgaaccacaaacagactgggattgcatttgcaataggcaggagaggagaggagtagagatctgaaggggggggggaaacggaagtgattttctcggccagatccgtgggaggaagggtatcttcgtgtactcgtctatggggatgttggcgctgaacgggctcatgtccctgcggcgcgaccgccggcggcggcggcggcatcaccggccgcaaatccgagcgcgctgtaagcctctttcctcgctgaacagctcacccgcccatctttatgttaagtttggctcggtggatgtgttcgttattgtcagctcataaaaagatagtatttctttttaatacctatctaactcgtctggattgatgtgggcctgttaccgatttttcacttgtttgacttcaaatttttcactttggtgaatacggaatagcaaagattattgattctccaccactttctccgtttgagctccttttaagttttaatttatttttttttcgcacaactaagcaacggggtatttcagatgggtgataccctgcataggttcctcaggaaaaaaaagatcaaattaattttgggagatatcaagggattgagtgcctttttctgcttttcttccgttcatgtctctgcaaccataacaatcctttttgtgtcgcagcaggtgggcttattgcctcaacgggtaaaagaaagacatcaccctgtcaacaagatgactatgatggtgattctcaagctggcaaaataatgagaaattcaatcccagaccttcctgaggtacgaggcattgaattccgatgatccagaaattttctttagcctgggcatgcttaggctgcgtttgagatgacatctatgatgagattatggtccacatgcaaaacgagacaagtgattagggtatggttaattaggtattaattatccatagattaaaaaaaaggatataacaaaacagaagagagagatagtgacctctgacaataatctatcagcatcaagagtccaataacatgttctgcttgtttgccattttttgctacctgtcttaaactagtgcacaattaaaaggctgctttggtgctcaaatagtcgtgcaggacaccatactaaactacagactgcaccatatagaagcatgacgcctggcgccgcttgttgcccaggagcgaatgccattggctagcagaggaacagcatcagagtccacagcggcaaaagactgggagcccgggcagctgcccatgctggccgggccctgaatccgccgctgcttagatttcaagcataatatcaccacgactcacccatcggactgattatcttgctgactgtgctaggctggctgtatattactccattttttttatatgaccatatggatttgcaatataaatgttgatctttacgtcctccattttttcttcacgcattctgatgtttgtgtatgcaggacatattgtttcgtatacagtcctttatgtcaatgcgtgaagctgctcgtgctgcttgcgtatctcgtgcttttctacattcctggaggtgtcatcccaatcttatctttaataaagatacgattgtcttgaagagaaatgcgtttggagagaatttccacggaaaaattgggcgcattctcaggaaccactcaggcattagcttgaaaacgttccagcttgactacagtggtatgtgtgggttcgatggcactagttatcttgacagttggcttcagattgctcttaaaccagagattgaagaactcaccctttttttgcctgaaacaaacaaacaatacagcttcccatgctcacttttatctgatggggtccgagactcacttcggtacattaaacttcgatgttgtgccctccatcccacacctgaacttggccccttgagaaacctatcaaatctgcatctgttgtatgtgagcattacatgggctgagttagagtgccttctttccaactctcttgctctggagcatttagagctcaatcattgcaaggggataatttgcctgaagataccttgcaccctgcagcagctcagcagccttaatgtcgttgaatgctcaggcttgaaagtgatagagagcaaagctccaaatctctctagtctatttgttagaggatccagggtaaacttctcccttgtagaaacattgcaaataaataagctagacatgggacatgcaatctgtgatgctcgggccaagctgccatccattatgccaaatcttgaaactcttgtcattgaatcggggcatgaggtatgtattctctaaaagatgaggtgctgtagtatggcgatatatacggattactttagtacaatgatatatacggattacattagtataatgatatatatggattacgttagtgagtgttatatatcgattacattagtgatacctgttgtgtaataaatctgatgcatgccatatttgttgtgcaggtggttgatgcaccaatgctgcctaccaaattcctctaccttaagcacctgaccattcatgtgataacaggatcgaccatttcccagccatatgactatttctctctggtttcttttattgatgcgtctccgtccttggagactttgatattaaatgtatgacattggcactgttcattcattcatttcatcctccaaagctttttgatcactctgggtctaattcaagcatatcatccttttcatggtcaggtgactcaggtacgtatggtgcatgaatcgattttcacggattcacaactgagacacatccctggacaccgccatggccacctcaagagtgtgaagatcactggtttcagctctgcgaagagcttggtggaactgacatgttatatcctcaataatgcggtgtcacttgagtgtcttacattggataccatttatggtcctaggtgtgatcaagataagtataggcggtgttttcccatgatagatggtgttctcacggatgctccaagagggcttgcagctatcagaacatacattgaggataaagttccatctacagttaatttgactgttctggaaccttgcagccggtgccatgttagaagaagagggtgaacatcatctcaatcgtgcaatgccgattccattcaattttagatgaaccaatatttgtttcctgaactatttatggctgtggcccaatgtgcaatagtttaattatcttagatggacaatggaccaagctttatctctgtattatcagacctgtttaatgtttattttttgctgtacatgtataagctgaagatttatatgtttttgtccaaaggttg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0479800, RefSeq:Os04g0479800