Os04g0480400

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Revision as of 11:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0480400| Description = Surfeit locus 2 family protein| Version = NM_001059636.1 GI:115459001 GeneID:4336177| Length = 2416 bp| Definition ...")
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Gene Name

Os04g0480400

Description

Surfeit locus 2 family protein

Version

NM_001059636.1 GI:115459001 GeneID:4336177

Length

2416 bp

Definition

Oryza sativa Japonica Group Os04g0480400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24425180..24427595

Sequence Coding Region

24425181..24425542,24425821..24425918,24426417..24426707,24427073..24427139,24427211..24427292

Expression

GEO Profiles:Os04g0480400

Genome Context

<gbrowseImage1> name=NC_008397:24425180..24427595 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24425180..24427595 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcccctaacctcgcgcgccacctctcctctcctcgtcctccgcctccggacgcgcagttcacgggcgccctaatggcgaaaaagggcaaggcggcggcggcggaggccgcggcgcccgacgcgggggtatcgagcccgcagggcggcggcggggagaaggagggcagcttcctgctgggctcgccgacctgggaggacgccgggggcgggcggtggcggtgcaaggagacggggcacgagctgccggagcgggagaaggaggcgtacgggcggtcccgcgcgtgcaggctcgcgctcatcgaccaagccgtcgcgcgcaagaagccgccgctcaacgccttcaagcctcaccccgagcacaagtcgaagcttatatgcaatattactggggacattataaacaagtcggaggaacacatctggaagcacatcaatgggaagaggttcctcaacaaactagaaaaactagaagaaaagatggcatcaggtgaaatggccgaaggtgaagctgaacagtcaaatgaaggggaaaataaaaccaagtcaaggaagaagaaggacaagaagaaagctgctgttgttaacccttctttgccacgagaacctaaaccagagattgatgattcagataattctgatgatccagatttctgggtgcctcctgttggaagtcgttgggatgatgatgatggaaaagaccgatggacctcctctccagtgaaggataaggatgatgcagcagaggatgaagatggtgatgacgatggtgatgacatggctgacaaggatgacaaggagacaagagaaattgcttcaagcaggacaaagcgactgtcagtagaagcagttggcccaagtagcttcgcttcaaggaagaaaaaaaccaaaaaggagcagtaa</cdnaseq>

Protein Sequence

<aaseq>SPNLARHLSSPRPPPPDAQFTGALMAKKGKAAAAEAAAPDAGVS SPQGGGGEKEGSFLLGSPTWEDAGGGRWRCKETGHELPEREKEAYGRSRACRLALIDQ AVARKKPPLNAFKPHPEHKSKLICNITGDIINKSEEHIWKHINGKRFLNKLEKLEEKM ASGEMAEGEAEQSNEGENKTKSRKKKDKKKAAVVNPSLPREPKPEIDDSDNSDDPDFW VPPVGSRWDDDDGKDRWTSSPVKDKDDAAEDEDGDDDGDDMADKDDKETREIASSRTK RLSVEAVGPSSFASRKKKTKKEQ</aaseq>

Gene Sequence

<dnaseqindica>2..363#642..739#1238..1528#1894..1960#2032..2113#ttcccctaacctcgcgcgccacctctcctctcctcgtcctccgcctccggacgcgcagttcacgggcgccctaatggcgaaaaagggcaaggcggcggcggcggaggccgcggcgcccgacgcgggggtatcgagcccgcagggcggcggcggggagaaggagggcagcttcctgctgggctcgccgacctgggaggacgccgggggcgggcggtggcggtgcaaggagacggggcacgagctgccggagcgggagaaggaggcgtacgggcggtcccgcgcgtgcaggctcgcgctcatcgaccaagccgtcgcgcgcaagaagccgccgctcaacgccttcaagcctcaccccgagcacaagtgcgtactagtaccggaatccgcccccatcttgtgccgcgctacccatctattattgcctttgctctcgcgttacgcaccaaggcgtatcccacgtatcgtgctcggaatttgtttatgcttaatcttggtttaattggttattttgctgtttaatacgagggttctaaattctagtgtccaacgtttgatcgtattttgtgaaataaagttggaaaaaaatctatgttctttttaggatgcagtcgagatgttgaatcgagtatgttatgttgtaggtcgaagcttatatgcaatattactggggacattataaacaagtcggaggaacacatctggaagcacatcaatgggaagaggttcctcaacaaactaggtaaataatcctgtagcgttatcttatatgcaatgccatgtgtgccaacggcctattgaactttgaactgagctctgcctttttatatatcgaactactaatttaagaacccatgaggttgactatttccatgcggctatcattttcttcatgctgtattcttctataggcatgtgatttatcatctactagtatgaattttcatcaacaatgattctgagagagaaaaatagtgattgacattggatgagtagttggtacattttctcagaacaattatgaacggatttcatcgttaatgcttattcaagtggatgatgtgccttgctttgcaatggttatttgaactttcttatatttgttttccattgttctggaaataatatcttccaaagcaatttgcatggaattcttttttcccacacagatagcctttccattgcattggaatgtttggttgctcctatatttaacatgtctattactcctatttaatagaaaaactagaagaaaagatggcatcaggtgaaatggccgaaggtgaagctgaacagtcaaatgaaggggaaaataaaaccaagtcaaggaagaagaaggacaagaagaaagctgctgttgttaacccttctttgccacgagaacctaaaccagagattgatgattcagataattctgatgatccagatttctgggtgcctcctgttggaagtcgttgggatgatgatgatggaaaagaccgatggacctcctctccagtgaaggataaggatgatgcagcagaggatgaaggtgaacttggcaagctttgcttttgttttatttaactgctttaacctaacaagccttaaagccatgatcataactcttagcacatgcgggagatattgttgctgctttgcttgagatagtattggtctaatactttgtatttatatatactgagttctttagaatatgagaaacagattcgtatgcagttgtatgaatgcatgcgaggttcgagagtggttacatttgatctgctcaatactttcagtggaaatcttccgcttctgaattttgtgattagcttattatagtcttttgctattatagatattgaaatttgaactatatgatctggtatgttccatgtctaatttggaatatgatagatggtgatgacgatggtgatgacatggctgacaaggatgacaaggagacaagagaaattgcttcaaggtactctcgaacatttctttcaatatttcaatagtgcatacaacatagttaagagatattttttaatatagcaggacaaagcgactgtcagtagaagcagttggcccaagtagcttcgcttcaaggaagaaaaaaaccaaaaaggagcagtaaaggttggtccacagcttatcatcgagttcaatgaagaacttatttgatctttctgtgtggacgaacaaagtccatctttgattcctcttggctggctagtcaggtgcgggttttgtattaattggtttgcttttagttagtgcttctctgtgtagccctatcgctgcacctttcagtggtatactattgcatgacaattctctatacttgcattagttaattcctgtgattttgatgtgagaatgaactgtgctacttgtcctatatttattcttgctatataacttcatatgtttcttttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0480400, RefSeq:Os04g0480400