Os04g0481700

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Revision as of 11:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0481700| Description = Similar to Multidrug resistance p-glycoprotein| Version = NM_001059648.1 GI:115459025 GeneID:4336189| Length = 2101 ...")
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Gene Name

Os04g0481700

Description

Similar to Multidrug resistance p-glycoprotein

Version

NM_001059648.1 GI:115459025 GeneID:4336189

Length

2101 bp

Definition

Oryza sativa Japonica Group Os04g0481700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24494692..24496792

Sequence Coding Region

24494707..24496719

Expression

GEO Profiles:Os04g0481700

Genome Context

<gbrowseImage1> name=NC_008397:24494692..24496792 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24494692..24496792 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgcacctgcagaaggcgccacccgtggcggcgagggaggagcgccaccgcgccgtggatgtggtggagagcgagatggtgtcgttccgcagcgtggagattatgtcggcggtcagcgccaccgagcaccgtcctagccccgcgccgtcgttctgctcggtcgaacactcgacggagattgggaggaagctcgtggaccacggtgtggcgcgctccaggaagccctcgaagcttcgcctgctgaagatgaaccggccggagtggaagcaggcgttgcttgggtgcgttggcgccgtcgtcttcggcgcggtgctgccgctgtactcgtacagcctaggctcgttgccggaggtttatttcctcgccgacgatggccagatccgttccaagaccaggttgtactacttcctcttccttggcatcgccgtcgtctgcatcacggcgaacatcgtgcagcactacaacttcgcggtgatgggcgagcgcctgacggagcgtgtccggggccagatgctcgccaagatcctctccttcgaggtcgggtggttcgacgaggacgagaactcgagcgccgcggtgtgcgcgcggctggcgacacagtcgagcaaggtccgctccctcgtcggcgaccgcatgtgcctgctggtccaggcgggcgccacggcgtcgctgggcttctcgctcgcgctcgccgtgtcgtggcgcctcgccacggtgatgatggccatgcagccgctgatcatcgcgagcttctacttcaagaaggtgctcatggctgccatgtccaagaaggccaagaaggcgcaggtgcaggggagccagctcgccagcgaggccgtggtgaaccaccggacgatcaccgcgttctcgtcgcagcggcggatgctccgcctgtacgaggccgcgcaacaaggccccaagaaggacaacgtggcgcactcgtggttctccggcttctgcctgtgcctgtgccagttcagcaacaccggcagcatggcggtcgctctctggtacggaggcaagctcatggccaaggggctcatcactcccacgcacctgttccaggtgttcttcatgctcatgaccatgggaagggtcatcgccgacgccgggagcttgacgtcggacttggcgcaaggcggcgacgcggtgcgctccgtcctcgacacgctggaccgtgaaccgacgatcaaggacgacgacaacgacaacgagaggaagaagaagaaacggaaggagataaaaggcgcgatcgagttcaagaacgtgcacttcagctacccgacgcggccggaggtggccgtgctcgccggattcagcctcgagatcggcgcggggaagacggtggcgctcgtcgggccgagcgggtccggcaagtcgacggtgatcgggctgatcgagcggttctacgacgcgcagaggggctcggtcctggtcgacggcgaggacatcaggagctacagccttgcacgcctccggtcgcaggtggcgctcgtcagccaggagccgacgctcttctccgggacgatacgcgacaacatagcgtacggcgccgccgaagagcacgccaccgaggacgaggtggcccgcgccgcggcgctcgccaacgcccacgggttcatcagcgccatggagcgcgggtacgacacgcgcgtcggggagcgcggcgcgcagctgtcgggggggcagaggcagcggatcgcgctggcgcgggcggtgctgaaggacgcgaggatcctgctgctggacgaggcgacaagcgcgctggacgccgcgtcggagaggctggtgcaggacgccgtggaccggatgctgcgggggaggacgtgcgtcgtggtggcgcaccgcctctcgacggtggagaagtccgacacgatcgcggtggtgaaggacgggagggtggcggagagagggaggcaccacgagctcctcgccgtcggccgcgccgggacgtactacaacctgatcaagctccagcacggcagatcgccgtgccttagtcccatgtga</cdnaseq>

Protein Sequence

<aaseq>MVHLQKAPPVAAREERHRAVDVVESEMVSFRSVEIMSAVSATEH RPSPAPSFCSVEHSTEIGRKLVDHGVARSRKPSKLRLLKMNRPEWKQALLGCVGAVVF GAVLPLYSYSLGSLPEVYFLADDGQIRSKTRLYYFLFLGIAVVCITANIVQHYNFAVM GERLTERVRGQMLAKILSFEVGWFDEDENSSAAVCARLATQSSKVRSLVGDRMCLLVQ AGATASLGFSLALAVSWRLATVMMAMQPLIIASFYFKKVLMAAMSKKAKKAQVQGSQL ASEAVVNHRTITAFSSQRRMLRLYEAAQQGPKKDNVAHSWFSGFCLCLCQFSNTGSMA VALWYGGKLMAKGLITPTHLFQVFFMLMTMGRVIADAGSLTSDLAQGGDAVRSVLDTL DREPTIKDDDNDNERKKKKRKEIKGAIEFKNVHFSYPTRPEVAVLAGFSLEIGAGKTV ALVGPSGSGKSTVIGLIERFYDAQRGSVLVDGEDIRSYSLARLRSQVALVSQEPTLFS GTIRDNIAYGAAEEHATEDEVARAAALANAHGFISAMERGYDTRVGERGAQLSGGQRQ RIALARAVLKDARILLLDEATSALDAASERLVQDAVDRMLRGRTCVVVAHRLSTVEKS DTIAVVKDGRVAERGRHHELLAVGRAGTYYNLIKLQHGRSPCLSPM</aaseq>

Gene Sequence

<dnaseqindica>16..2028#ggcgtgtacgccaggatggtgcacctgcagaaggcgccacccgtggcggcgagggaggagcgccaccgcgccgtggatgtggtggagagcgagatggtgtcgttccgcagcgtggagattatgtcggcggtcagcgccaccgagcaccgtcctagccccgcgccgtcgttctgctcggtcgaacactcgacggagattgggaggaagctcgtggaccacggtgtggcgcgctccaggaagccctcgaagcttcgcctgctgaagatgaaccggccggagtggaagcaggcgttgcttgggtgcgttggcgccgtcgtcttcggcgcggtgctgccgctgtactcgtacagcctaggctcgttgccggaggtttatttcctcgccgacgatggccagatccgttccaagaccaggttgtactacttcctcttccttggcatcgccgtcgtctgcatcacggcgaacatcgtgcagcactacaacttcgcggtgatgggcgagcgcctgacggagcgtgtccggggccagatgctcgccaagatcctctccttcgaggtcgggtggttcgacgaggacgagaactcgagcgccgcggtgtgcgcgcggctggcgacacagtcgagcaaggtccgctccctcgtcggcgaccgcatgtgcctgctggtccaggcgggcgccacggcgtcgctgggcttctcgctcgcgctcgccgtgtcgtggcgcctcgccacggtgatgatggccatgcagccgctgatcatcgcgagcttctacttcaagaaggtgctcatggctgccatgtccaagaaggccaagaaggcgcaggtgcaggggagccagctcgccagcgaggccgtggtgaaccaccggacgatcaccgcgttctcgtcgcagcggcggatgctccgcctgtacgaggccgcgcaacaaggccccaagaaggacaacgtggcgcactcgtggttctccggcttctgcctgtgcctgtgccagttcagcaacaccggcagcatggcggtcgctctctggtacggaggcaagctcatggccaaggggctcatcactcccacgcacctgttccaggtgttcttcatgctcatgaccatgggaagggtcatcgccgacgccgggagcttgacgtcggacttggcgcaaggcggcgacgcggtgcgctccgtcctcgacacgctggaccgtgaaccgacgatcaaggacgacgacaacgacaacgagaggaagaagaagaaacggaaggagataaaaggcgcgatcgagttcaagaacgtgcacttcagctacccgacgcggccggaggtggccgtgctcgccggattcagcctcgagatcggcgcggggaagacggtggcgctcgtcgggccgagcgggtccggcaagtcgacggtgatcgggctgatcgagcggttctacgacgcgcagaggggctcggtcctggtcgacggcgaggacatcaggagctacagccttgcacgcctccggtcgcaggtggcgctcgtcagccaggagccgacgctcttctccgggacgatacgcgacaacatagcgtacggcgccgccgaagagcacgccaccgaggacgaggtggcccgcgccgcggcgctcgccaacgcccacgggttcatcagcgccatggagcgcgggtacgacacgcgcgtcggggagcgcggcgcgcagctgtcgggggggcagaggcagcggatcgcgctggcgcgggcggtgctgaaggacgcgaggatcctgctgctggacgaggcgacaagcgcgctggacgccgcgtcggagaggctggtgcaggacgccgtggaccggatgctgcgggggaggacgtgcgtcgtggtggcgcaccgcctctcgacggtggagaagtccgacacgatcgcggtggtgaaggacgggagggtggcggagagagggaggcaccacgagctcctcgccgtcggccgcgccgggacgtactacaacctgatcaagctccagcacggcagatcgccgtgccttagtcccatgtgaagtgatggcgtagtccaccacacgaatcattgcgttgcatacatggtcgagcaatggaacggttgaatggatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0481700, RefSeq:Os04g0481700