Os04g0483600

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Revision as of 11:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0483600| Description = Galactose oxidase, central domain containing protein| Version = NM_001059661.1 GI:115459051 GeneID:4336203| Length =...")
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Gene Name

Os04g0483600

Description

Galactose oxidase, central domain containing protein

Version

NM_001059661.1 GI:115459051 GeneID:4336203

Length

6433 bp

Definition

Oryza sativa Japonica Group Os04g0483600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24579374..24585806

Sequence Coding Region

24579594..24579698,24579786..24579854,24579963..24580049,24580214..24580366,24580825..24580944
,24581097..24581258,24581338..24581556,24581883..24581925,24582456..24582519
,24582662..24582767,24582894..24583013,24583140..24583220,24583317..24583359
,24583617..24583678,24583786..24583872,24584313..24584359,24584453..24584585
,24584728..24584796,24585233..24585319,24585626..24585757

Expression

GEO Profiles:Os04g0483600

Genome Context

<gbrowseImage1> name=NC_008397:24579374..24585806 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24579374..24585806 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaagaagcagaagaagcccaggaaggggaaggagaagacggagcggaagacggccaagggcgaggagaagcgcgcccgccgcgaggcccggaaggtcggcgaggaggacgacatcgacgccatcctcaggagcatacaaaaggaggaggctaagaagaaggaggtacatatagatgagaatgtccctgcaccatctccccggtccaattgctcgcttacaataaatcccctgaaagatacagaattggttctgtatggaggagagttctacaatggcagcaagacctttgtttatggtgatctttatcgctacgatgtagagaaaaatgagtggaagttggtatctagtcctaacagtcctcctccacgaagtgctcaccaaacagttgcctggaagaataatatatacatgtttggtggggaattcacttcgccaaaccaagaacgttttcatcattacaaggacttttggtcattggatctaaaaacaaatcaatgggagcaaattcttgcgaagggttgtccaagtgcacgttcagggcacaggatggtcctctataagcacaagatcgtgctatttggtggtttttatgacactcttagggaagtgagatactacaatgacttacatgtttttgatttagataatttcaagtgggaggagatcaagcctcgccctgggtgcttgtggccaagtccaagaagtggctttcagctaatggtataccaagatcagatatatctgtatggcggatattttaaagaagtagtttcttctgacaaatctgcatcagaaaaaggaacagttcatgcagatatgtggactcttgatcctcgtacttgggagtggaataaggttaagaaaactgggatgccacctggccccagagctgggttttctatgtgcgttcacaagaaaagggctgttcttttcggtggtgtggtagatatggaaattgaaggggatgtcattatgagcatgtttatgaatgagctctatggtttccagctggacaaccatcgctggtatcctttagagctcaggaaagacaagcctgctaaaaataagacaaaggacatcaaaagaaaagaaccatcgaacaatgtggaagataatcttggtaatgaggaggatgagatcatggaggactcagaaactactggagggcaatccgaagtccatggggtttcgaatcacttgaccaagagtctaaccttaaataaagctggctcaggcaatagctctgatattctctctgattcgacaacacaagaagtactcccagaggcagtgaaacccggtggtcggatcaatgcatgcttggctgtagggaaagatacactctatttatatggaggaatgatggaattgaaagatagagaaattactcttgatgatatgtattcacttaaccttagcaaactagatgagtggaagtgtatcataccggcatctgaatctgaatggctagaaatttctgaagatgaggatgatgaagatgatgatgatgatgataatgagaatgatagcgaggatgacgctaatcagaccgatgaagatgatgaagagtctgatgaagatgccgagaagaatgtcgatatgtccactgctgtatcgctaataaagggtgaacgtaagaacttgcgaagaaaagagaagcgtgctcggatagagcaaattcgggttatgctcggtctttctgattctcaaaggactccaatgccaggagagtcactaaaagatttctacaagagaacggatatgtactggcagatggctgcatatgagcacactcaacacactggaaaggagctccgcaaagatggttttgatcttgccgaaactcgatataaggaactgaaacccatactcgacgagctggctgtgctcgaggctgaacagaaagctgaggaagaggctagtgcttccactagttccaagaaagacacgaggaaaagcaagcagaagagtggcatgagatag</cdnaseq>

Protein Sequence

<aaseq>MGKKQKKPRKGKEKTERKTAKGEEKRARREARKVGEEDDIDAIL RSIQKEEAKKKEVHIDENVPAPSPRSNCSLTINPLKDTELVLYGGEFYNGSKTFVYGD LYRYDVEKNEWKLVSSPNSPPPRSAHQTVAWKNNIYMFGGEFTSPNQERFHHYKDFWS LDLKTNQWEQILAKGCPSARSGHRMVLYKHKIVLFGGFYDTLREVRYYNDLHVFDLDN FKWEEIKPRPGCLWPSPRSGFQLMVYQDQIYLYGGYFKEVVSSDKSASEKGTVHADMW TLDPRTWEWNKVKKTGMPPGPRAGFSMCVHKKRAVLFGGVVDMEIEGDVIMSMFMNEL YGFQLDNHRWYPLELRKDKPAKNKTKDIKRKEPSNNVEDNLGNEEDEIMEDSETTGGQ SEVHGVSNHLTKSLTLNKAGSGNSSDILSDSTTQEVLPEAVKPGGRINACLAVGKDTL YLYGGMMELKDREITLDDMYSLNLSKLDEWKCIIPASESEWLEISEDEDDEDDDDDDN ENDSEDDANQTDEDDEESDEDAEKNVDMSTAVSLIKGERKNLRRKEKRARIEQIRVML GLSDSQRTPMPGESLKDFYKRTDMYWQMAAYEHTQHTGKELRKDGFDLAETRYKELKP ILDELAVLEAEQKAEEEASASTSSKKDTRKSKQKSGMR</aaseq>

Gene Sequence

<dnaseqindica>6109..6213#5953..6021#5758..5844#5441..5593#4863..4982#4549..4710#4251..4469#3882..3924#3288..3351#3040..3145#2794..2913#2587..2667#2448..2490#2129..2190#1935..2021#1448..1494#1222..1354#1011..1079#488..574#50..181#agcaagtgagcgcggggagagagacagaagccggcggcggcggggcgagatggggaagaagcagaagaagcccaggaaggggaaggagaagacggagcggaagacggccaagggcgaggagaagcgcgcccgccgcgaggcccggaaggtcggcgaggaggacgacatcgacgccatcctcgtacgtgtgctccctccctcccgcccccctcctctgcgtcagctcttcacgctcgctcagtgcgctctagctcgatcggcgtctccatgtgcggttttgtttgctcaccaccaccttctgcgtctcgtgatgcactccggtggctgaaaaattggaagcgattttcgcactggctcacctttttcccttcacatttcgttgcgtagcagctatggattttagatgagtttggtgttgctatgtgtgctgtttgaactttttttttttgctgatttatctatttgctctggttatttttcattgcagaggagcatacaaaaggaggaggctaagaagaaggaggtacatatagatgagaatgtccctgcaccatctccccggtccaattgctcggtaagacattttagagcaagtgccagctaaagaagttaatctttcggtattcttgtgattatgtacttgaagtggactaggtatcatttttatgcttgtggtggtcatgtttgcatgcttagaatttatatactccagtaggattaataaatttcttcaggcaagatggatttttttatgaagtaatttgatcaaatatgatgatcttttggtgatactgaaccgattggtttttcagttccggataggtgatgtcaaattacaattcaggggcaaaatgtgttaaaagatagatgttcgttttgtttttttttttgttaactgttggaaaaagtttttgatgttgtacagagatcctccctctaaatgttaactataacaaataaacctgcatatgatcttccagctgaccaagttaattccttcttaaatgcagcttacaataaatcccctgaaagatacagaattggttctgtatggaggagagttctacaatggcagcaaggtgggagacatatccttcacgatttcactgctggttgaatgagatatgttcatctagtgttctttttgcctctattctgcttctagaggtttttgagtactgaaatagtatttcttttcctcgccacaatctatttctgcagacctttgtttatggtgatctttatcgctacgatgtagagaaaaatgagtggaagttggtatctagtcctaacagtcctcctccacgaagtgctcaccaaacagttgcctggaagaataatatatacatgtttggtaacataacttaactttgggaaggcattctatgagttaaaatgctttttcagtatgtatgatttagttttttattctgtgttgatgtttcaggtggggaattcacttcgccaaaccaagaacgttttcatcattacaaggtagaagactaattttgtcagtctatttcttgtgactgttttgagtatcttctcttggcacaaggcatttgcacaattcgtatataagcagtagcttcataagcaatacatatctggcatgattttttttcaattttaaaccaagagataggtactgattcccatgttcttacataattataagttgaaatatgactaatggagactaatatgtgcagttcttctgctatttattgatttaagattaagatgtagaggatgcggggttcacctgcccttttatttggatttgcacatataacatcactttttattcctgattgcctttttttttcctttctgttgtgatattaatggggttatttcgagattagctatcttagatggaaaactcattattatggttctattcaaatttctggtctgattttgtactgtaggacttttggtcattggatctaaaaacaaatcaatgggagcaaattcttgcgaagggttgtccaagtgcacgttcagggcacaggatggttagtggttttacattaaaatcagtcatcaactattctgctcccctcttttcaccttaatatttctgtattatgagcagtagtaaattgtgttctttttcctacaggtcctctataagcacaagatcgtgctatttggtggtttttatgacactcttagggaagtgaggttagtacagttacattttatatgactctaccctggtaatcttgttattagagtaacatttatatttggaccatgtctagaagtagtggagtcattatgtccaaactacaaattatgcactacctgaataacagtgtagcactcttacagctgatcatccgcaaagaatgaaatggtgtggcgtagagtacgttctgaataaatagtgtgacatgacatgatctgatctgcattttttttataatatccttctgcagatactacaatgacttacatgtttttgatttagataatttcaaggtgagtacaccatgttaatattttgtttaatactgttagtagtaacacatgaagtcatttattttaatactcttactgggaatatttgtatttcagtgggaggagatcaagcctcgccctgggtgcttgtggccaagtccaagaagtggctttcagctaatggtataccaagatcaggtaggtctttttggatttaaagctaggacattgatacttcataaaaagagtttaaattaactataaaccaaccttgtcttcgactacttttgtttacaagagtattaatggcccttatttctgtagatatatctgtatggcggatattttaaagaagtagtttcttctgacaaatctgcatcagaaaaaggaacagttcatgcagatatgtggactcttgatcctcgtacttgggagtggaataaggtgatctcttgcaattttttagaacattgtatcaacttccatcatgatagtgtatcgagttttactttaagccatatatccactgagtgatttgcatattattaccttcacttgatttcttaataggttaagaaaactgggatgccacctggccccagagctgggttttctatgtgcgttcacaagaaaagggctgttcttttcggtggtgtggtagatatggaaattgaaggttattttcagctcaattttgctctgtgcatagctacttaggttattttactaagtatttgaaataccacgcgtgtcaagtttgttccttttctgtagaagttctcaaggcctaactgtagaacccaattttgtgattgcaggggatgtcattatgagcatgtttatgaatgagctctatggtttccagctggacaaccatcgctggtatacttcaatactccatttgagtatcttgtgtttttaagtaacacaggctagttttatccctgcttattttgttccttgctatttttgtgtattgttgcaactttctttattattatttaacagtgcagctaactaatgtcacttcctattccgatatgcaaactgcttctaactaggtttaaaattattaaaggtctaaatctttctcggctgattgatggttatgttcatctatcgtcttaggatgaactttgtttgtaatcttgtggttatctagataacataactactttgagaattgttcagtgatattattgtttactcttgggatcccttcgtagcatattattgtttacttcagcggaattgttcagcgatgttcattttggttgaaactactggtccacggctcacatattctccaatttcaattgtccacactggtgcatagatgagaaatgttatgctttcttatttagcttcatttttgtgtgtctatgttcagattattttccttgctgtttcaggtatcctttagagctcaggaaagacaagcctgctaaaaataaggtgattcctcgaattcaatcatatgaccagccatctcatgtttacagtttgtattttttaggtacttgatacacagtctactctgcaggaatctatttcattagttcagacataaagactaagcatgtagtatagggtatgcctgtttttctttttaataagcatatacgatatgtacatattctcatatactattatactgttattttcttaataagcatatgcgatctgtcgacatattcacattgactattatatagtaatatttggatcattgcttaaaagcagtttgtgcttctttttttttttttgggtgccatgtgtagacaaaggacatcaaaagaaaagaaccatcgaacaatgtggaagataatcttggtaatgaggaggatgagatcatggaggactcagaaactactggagggcaatccgaagtccatggggtttcgaatcacttgaccaagagtctaaccttaaataaagctggctcaggcaatagctctgatattctctctgattcgacaacacaagaagtactcccagaggtattgcagctgttcttttagatgttgacatttacattctaatgatcttttgtttctcattagcatttgctgcttacaggcagtgaaacccggtggtcggatcaatgcatgcttggctgtagggaaagatacactctatttatatggaggaatgatggaattgaaagatagagaaattactcttgatgatatgtattcacttaaccttagcaaactagatgagtggaagtgtatcataccggtcagttgcagattggccccttctttttgccattttgttgtttaactgatagtgttgtttatttcaatcagagataacagaaaattatctgttatcattttttactattcacattggtttctgaacttgccttactcacctttcttatgcaggcatctgaatctgaatggctagaaatttctgaagatgaggatgatgaagatgatgatgatgatgataatgagaatgatagcgaggatgacgctaatcagaccgatgaagatgatgaagaggtatgcaaaattattttaggtttggtcacacatttttgggatttatatcttgctaagttcatgattaatggctgtactagatagaatctttctaagttcgcgtgggcgaggactttatatctgatttaggcacgtttacattttctctacaaattagaacagattttcaaaaaatgttttttaagaaaatggggaagataatgttgacttgatgtgtcccacaattctgccacaaaccaaacatcctgtctctggcctgtttgtttctagttgaatcttggtgtttgaccaaaatactgcatgatggttcatcttctattacggatactgtatacgttaatatgaagtccatggttctcatggcatccttctgagatttatagctattgtgtatctttcatttcctctcaatcatactgtgtggttattaatctgtaatcctaaaactgttttcatagtctgatgaagatgccgagaagaatgtcgatatgtccactgctgtatcgctaataaagggtgaacgtaagaacttgcgaagaaaagagaagcgtgctcggatagagcaaattcgggttatgctcggtctttctgattctcaaaggactccaatggtgatgttgtaatcaacattttttttgttctaaatttgtttgaagttgttccgacaaagtacatatactttgtttactcagaggaactcttggctgataatttgttacacacagttaacaattaaaaccatatatcactaattcccatattcacacttttaaagccaggagagtcactaaaagatttctacaagagaacggatatgtactggcagatggctgcatatgagcacactcaacacactggaaaggttagtttctgctccttaagtatcttcacccgtcatacctgttatcatattctctaggttgctggcagtatgagtttgctgtatttattcgtgctcatccaatgccaggagctccgcaaagatggttttgatcttgccgaaactcgatataaggaactgaaacccatactcgacgaggtaaaattgtcatgttgtgtcccctttgagacaaaacggtatttctgacttggtacatattaactgactcttacacgccctcttcagctggctgtgctcgaggctgaacagaaagctgaggaagaggctagtgcttccactagttccaagaaagacacgaggaaaagcaagcagaagagtggcatgagatagctttggttcgaaatatcgaaatagagagtggtttaggccaatgctttaagccatctgggattttttcctttctgagccattggtcagctcgatcgattaatccacacgaggtgcctataactacctgtgtaggttggcttaatccatggttaaaattttccaacgtactgtatttgcgattcctcggaagcattcatggagagattgtacacagttctat</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0483600, RefSeq:Os04g0483600