Os04g0484800

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Revision as of 11:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0484800| Description = Cullin family protein| Version = NM_001059662.1 GI:115459053 GeneID:4336204| Length = 7658 bp| Definition = Oryza s...")
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Gene Name

Os04g0484800

Description

Cullin family protein

Version

NM_001059662.1 GI:115459053 GeneID:4336204

Length

7658 bp

Definition

Oryza sativa Japonica Group Os04g0484800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24627794..24635451

Sequence Coding Region

24627872..24628057,24628840..24628929,24629289..24629520,24630489..24630766,24630885..24630956
,24631363..24631604,24632090..24632506,24632605..24632806,24632933..24633047
,24633130..24633215,24633544..24633663,24633740..24633828,24633897..24633978
,24634381..24634572,24634696..24634762,24634853..24634977

Expression

GEO Profiles:Os04g0484800

Genome Context

<gbrowseImage1> name=NC_008397:24627794..24635451 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24627794..24635451 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagctggtggacgacgccgacggggccctcgactcgtgggcccgcttctgcgacctctccgacgagctcttcggcggcgccggcgacctctcggcgggcccgcgcctggcccccgtcgtcgcggacctctgcgcccgcggcctcgccgagctgcttcgggaccaattcatccgctccctagagggaatatttagaagcaacgcggttaagaagttctggcagcagtttcatccttattgcaattcctctgcagtggaaagaattaaattctgtgttcaagaaaactggcctgaggatatcttaagtaaagcattggaagacatatgtttggaaaagaattaccaggaaaagtgtgttctggctctagttcattctttacaatcttatgaggataggtcaccacacagaaaatctaaagcactggattgtagttccagcttaatgcctaggtaccagttaatggtatcttcagtacttctgacaacactaccattgagttttcctgagatattaaatgtatacttcaagaagaaactggaagagttaaatatcatgatggctggattggatgggagcgatccatttgataatcatgatctttttgaaaggaacagtacctctgcttggcattctgaaatggacattgatggtcaagaacctgggatttctgaaagtagaaatttggttaagaacattggaaaagttgttcgtgatctaagatatcttggttttacatcaatgactgaggactcatactcttctgcaataatctggcttttaaagtctaaagttcatgaactagctggtgatgattatagaattcctgtacttgggtgtgtcaaaaagtggattcaggccgttcctcttaaatttttgcatgctcaattgacatatctgggggactctcttgacaatgaaagtggatcatctggtctcaaatcacctttggcctcacgcccttcttccttccctgggattggcgttccttcagaagcccttgtgagatggcacatgcgccttgagtattttgcttatgagaccttgcaggacctgcgaattggcaaactttttgaaatcatagttgattaccctgagagctctcctgccattgaagacctaaaacagtgtttggagtacacgggtcaacattctaaacttgttgactcatttatctcatcattgagatatcgcttgctgacggctggtgcatcaaccaatgatatattacaccagtacgtgtccactatcaaggcattacgtacaattgatcccactggtgtcttcttggaagcagtaggtgaaccaattagagattacctgagaggtagaaaggacactatcaaatgcatagtaacaatgctcactgatggatctggaggaaacgcgaacggaactggaaatgctggggacaatcttctggaagaattgaatagagatgctgaaaaccaggaaaatgttgattatgatgaccatacgaacattgatgagaagcaagcatggctaaatgctgaaagctgggaacctgatcctgtggaagcagacccattaaagggcagcaggaatagaaggaaaattgatattcttggacttattgtcagtataattgggtcaaaggaccagctagtcaatgaatatcgtgtaatgctggcagaaaaactgctcaataaatctgattttgatattgattcagatatccgcacgctggaactgcttaagattcattttggggagagcagcatgcagaagtgtgagattatgcttaatgacttgattgactcaaagagaaccaactcaaatattaaaacatctttatcaaagacatctcaaactgtaggaactgtgcaagaggagacagaattgtctcatgaggttcttgacgcaactataatatcctccaatttctggccaccaattcagacagaagacctcacagttcctgcttcagttgatcagttgctgtctgattatgcaaaaaggtttcatcagataaaaacaccacgcaagctactctggaagaaaaatcttggaactgtcaagctggaactgcaattcgaggataggagtatgcagtttactgtagctcctgtccatgctgcaatcataatgcaatttcaagagaaaccaagttggacttcaaagaccctagctacagcaatcggagtacctgtggactctcttaacagaaagataagtttctggacaagcaagggcgtcctgacagaatcagttggtccagatgcggatgaccccacatttactgttgttgatagcacatctgattttaacaaaaacagcaccgtgaaccaactctctgaaaggtttcaaattactgaagaggaaggtgaaagttcgattgcgtctgttgaggaacaacttaggaaagagatgacagtttatgagaaattcatcatcgggatgctaaccaattttggaagcatgacactggaccggatacacaacactctcaagatgttctgcatagccgagccatcatatgataaatcactgcagcaattgcagagttttctttctggtctagtgtcagacgaaaagctggagatgagggatggatcatacttgctaaggaagtag</cdnaseq>

Protein Sequence

<aaseq>MQLVDDADGALDSWARFCDLSDELFGGAGDLSAGPRLAPVVADL CARGLAELLRDQFIRSLEGIFRSNAVKKFWQQFHPYCNSSAVERIKFCVQENWPEDIL SKALEDICLEKNYQEKCVLALVHSLQSYEDRSPHRKSKALDCSSSLMPRYQLMVSSVL LTTLPLSFPEILNVYFKKKLEELNIMMAGLDGSDPFDNHDLFERNSTSAWHSEMDIDG QEPGISESRNLVKNIGKVVRDLRYLGFTSMTEDSYSSAIIWLLKSKVHELAGDDYRIP VLGCVKKWIQAVPLKFLHAQLTYLGDSLDNESGSSGLKSPLASRPSSFPGIGVPSEAL VRWHMRLEYFAYETLQDLRIGKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLVDSFI SSLRYRLLTAGASTNDILHQYVSTIKALRTIDPTGVFLEAVGEPIRDYLRGRKDTIKC IVTMLTDGSGGNANGTGNAGDNLLEELNRDAENQENVDYDDHTNIDEKQAWLNAESWE PDPVEADPLKGSRNRRKIDILGLIVSIIGSKDQLVNEYRVMLAEKLLNKSDFDIDSDI RTLELLKIHFGESSMQKCEIMLNDLIDSKRTNSNIKTSLSKTSQTVGTVQEETELSHE VLDATIISSNFWPPIQTEDLTVPASVDQLLSDYAKRFHQIKTPRKLLWKKNLGTVKLE LQFEDRSMQFTVAPVHAAIIMQFQEKPSWTSKTLATAIGVPVDSLNRKISFWTSKGVL TESVGPDADDPTFTVVDSTSDFNKNSTVNQLSERFQITEEEGESSIASVEEQLRKEMT VYEKFIIGMLTNFGSMTLDRIHNTLKMFCIAEPSYDKSLQQLQSFLSGLVSDEKLEMR DGSYLLRK</aaseq>

Gene Sequence

<dnaseqindica>79..264#1047..1136#1496..1727#2696..2973#3092..3163#3570..3811#4297..4713#4812..5013#5140..5254#5337..5422#5751..5870#5947..6035#6104..6185#6588..6779#6903..6969#7060..7184#gagtttttggtgttcgtcttccctcccgcgcccgcgccttctcgctcgcgcgcccgcggggacgcggcggctagggcgatgcagctggtggacgacgccgacggggccctcgactcgtgggcccgcttctgcgacctctccgacgagctcttcggcggcgccggcgacctctcggcgggcccgcgcctggcccccgtcgtcgcggacctctgcgcccgcggcctcgccgagctgcttcgggaccaattcatccgctccctagaggtgacgcaacccccacgcttctctacccacactcacctgctgcgtgttgctcccgccgcgcggagtattggggggctttctgcattgcacggttttggggactcggatcgcgctgcgcgctgagtgtttgtgagaatgcctgccccgaatttgagacggtgtagcagtagcagagggggtatggacttgggctcaaagaccctttcgtgtgtgcttggccatagacagtcaaggttgaactaggccacactatggaaacatggggtagacgggtagtaggactagtttgctttcgctgaaacaattgtcaggacatcacttctttcatcccttcaggtttgtggtgaacccttttatttatctgtgacgtagttaaaaaggagggaagagatggccacaatgcacagggtggctgtttcctgtttgtcagacaggcagagccccctgcaatttaggggagagtatctatgtgctagagtgtctacaatacttgttttagttttatttgagcattgaaaattgacagaatgcctcaggttttcaggttggtttgaaattgtaatggcttaggatttgcacttaacttttttcactccttacattttagttgaattagctcttatgcaaacatataagaggatcctagtctaaaagatgccatattatctgttgcaagtctgctggctgtttaaaattctatacccttgctcgtatttatggaatgctatgcaaagctttttattcttactctttctctattcaacctgtccttattaatgcagggaatatttagaagcaacgcggttaagaagttctggcagcagtttcatccttattgcaattcctctgcagtggaaagaattaaattctgtgtgagttacagaatagttaattatttgttcatccatacgtttgtttcagggtagaaaatttatgttgcagaaatgacatcttgcctgcttcatattctgattgtctttcttgcatacccaggatgtgatatctttcatatgttgtatcaagaaatgaaatggcattctttgtattgaaagatgaaaccataaaaccatcccagccatgcaaatattttaaagatactttcaccagtttgtcaatactgctgtatcataatttgaaactagtgaataaagtgtatattagtaatcatcttacctaatttcggtcttttaacattttacaacagcataatttctctaaccatgaatttcaggttcaagaaaactggcctgaggatatcttaagtaaagcattggaagacatatgtttggaaaagaattaccaggaaaagtgtgttctggctctagttcattctttacaatcttatgaggataggtcaccacacagaaaatctaaagcactggattgtagttccagcttaatgcctaggtaccagttaatggtatcttcagtacttctgacaacactaccattgagttttcctggttagtatctttttcaccactgttttactgtatgaaaaggcttgagtttgacactgagccaattctgaaatgtttaccatgacttccatttctgaaccttgcggagtggtttgtgtttctctagattattctttagaatcatgaaggatagggtgcatggcaacacaaacaatgttatattttcagtttgttttctaggcatcagttttctaggcctcacaatgatctttagaccagttatgactaaactggagtgttgtgttatctcctatgcgttaattcttccaagactcatgtggccttttcataaagagggaaagatttattactagtattaaatcttatagagccgcagattgatgcaaattacccaactgcctttacttttttggcacttttggatgggatatttatggtttccaaactttgttctctgtatctttgctcctttggtcctgccatctgggggccatatgaataatcactcattgttaggacaataagttagaatatggatgaaactgcaaattggatcttgtattggcaatttggattgattttattagcctctgcagaaaaggtcataaccattggaaagcattcaacaatccaaaattttttctattcatgtagcatgcatacccatcttccacattatagttgggttgcggccgtccttttttttgttttttgtttaaggttactttacagggtttcttggattgatggaatcatggacagatctcctattctcctccctctgataaaatcagttacaatatcctcttttagctgccagagcacagcatgcttgttgcacacccactgacacagttagttcaggaatattgcacatgaaacattctacagttactaattaatccaaatagaagctattgtttttaacaaatacattttcctgaaattataatattggtgacttgtttttttttctacttgatctgtagagatattaaatgtatacttcaagaagaaactggaagagttaaatatcatgatggctggattggatgggagcgatccatttgataatcatgatctttttgaaaggaacagtacctctgcttggcattctgaaatggacattgatggtcaagaacctgggatttctgaaagtagaaatttggttaagaacattggaaaagttgttcgtgatctaagatatcttggttttacatcaatgactgaggactcatactcttctgcaataatctggcttttaaaggtccaggctcacttctttaccttaagtacctagtgtataccacatatattattttggcatggacaatcttgaatttctgcctgtatccttatctgaactctcaattctcatattgcagtctaaagttcatgaactagctggtgatgattatagaattcctgtacttgggtgtgtcaaaaagtggattcaggtaacctttcttatcctcattcagtcatttattcagaaacatctccctgtccgtcaaatttgttctgtgtttctagcttcatattatacccgcttaagtagttgggtcttgtaaggataaattattctctgcaggtttagccttttttccctcgcacatatttgaattgaaataagacttagtgttaatgtaatagagctgtcacatcagtgcatctatcatgagctagtgcgccttaagaatattaatttttgtctcattgttctttcaattacttaatacctcttttgaatcagttctgtaagtccattgtatttagtgtaacatgatatctactatgcccttaattccatctgtaaatgctgctcagcataatttgctgacaataatttctgggtcttgccaggccgttcctcttaaatttttgcatgctcaattgacatatctgggggactctcttgacaatgaaagtggatcatctggtctcaaatcacctttggcctcacgcccttcttccttccctgggattggcgttccttcagaagcccttgtgagatggcacatgcgccttgagtattttgcttatgagaccttgcaggacctgcgaattggcaaactttttgaaatcatagttgattaccctgagaggttagtcattgtccactacatgatgctgttgggcattgaatatccaaatatcttttccaacctttgatatgcctgtattttctttgcactgtaaggtgtagaagtgtatgcagattacttgttttattggtaatgtttatggtgtcctgtgtcttgctggcaatcctcatttacctgaaggaggtctatatagcatgatataatttatttagttattgctttttttcgtcatctctttttgtgaccagtgaataatttgttgctcttgaaccaaacatctgcatttcttttcatgtgccacaccatgtcttttccatgttaaggtctaaccaaatatgttcacacttcacacggccatctcaaacagaagagtttgcttatgatatttcttttatgttgcattaatttagttttattctttatgatgtatgtgttcttaactggagcacagtttttaatctggaaatttttgggtattgatgaagctctcctgccattgaagacctaaaacagtgtttggagtacacgggtcaacattctaaacttgttgactcatttatctcatcattgagatatcgcttgctgacggctggtgcatcaaccaatgatatattacaccagtacgtgtccactatcaaggcattacgtacaattgatcccactggtgtcttcttggaagcagtaggtgaaccaattagagattacctgagaggtagaaaggacactatcaaatgcatagtaacaatgctcactgatggatctggaggaaacgcgaacggaactggaaatgctggggacaatcttctggaagaattgaatagagatgctgaaaaccaggaaaatgttgattatgatgaccatacgaacattgatgagaagcaagcatggctaaatgctgaaaggtatatttgctctctgtttcttgaactattaagaaataattgctcctttaataagtacatcaataaaactgctgtcattgtgattccaacttttacagctgggaacctgatcctgtggaagcagacccattaaagggcagcaggaatagaaggaaaattgatattcttggacttattgtcagtataattgggtcaaaggaccagctagtcaatgaatatcgtgtaatgctggcagaaaaactgctcaataaatctgattttgatattgattcagatatccgcacgctggaactgcttaaggttggactgttacttttgtgattgtcttcttagctatgccttttctatgtatttgattgaattgcatatgatgctattccttagttgttatctctattttttttaatgatgctgttgttttggcagattcattttggggagagcagcatgcagaagtgtgagattatgcttaatgacttgattgactcaaagagaaccaactcaaatattaaaacatctttatcaaagacatctcaaactggtactgcttaaactgcgagtgcttgtaccaaacagatcaaatgttacagcgtttgcatttaaactctcttcttttttgtcagtaggaactgtgcaagaggagacagaattgtctcatgaggttcttgacgcaactataatatcctccaatttctggccaccaattcaggtatggtacaaagcttttatcgaaaccatcatggtaactgttgagctaaattagtgtcatctgtcatgtcttcccttttcttattttctgctggggcgtggggagacctatgactaaaatagtcttcagttctcatactaatatttcatatggtaaggagatgttgattcacagctattgtaaattggaaatctctaatcatgttgaacttgttgctcaaccaagaatcatgcggtcaattactgatgttcgatctttactgtttatttcacttgaccttagtacgacaatctgtctagattcactaaacctctcaaaacaaatgtagacagaagacctcacagttcctgcttcagttgatcagttgctgtctgattatgcaaaaaggtttcatcagataaaaacaccacgcaagctactctggaagaaaaatcttggaactgtcaaggttggtatgaaactttaaactgaatgtgtagctacaaggaatcattcctttttaagaatttcttttattttcccagctggaactgcaattcgaggataggagtatgcagtttactgtagctcctgtccatgctgcaatcataatgcaatttcaagagaaaccaaggtaataaaactaccatgctgcacatggctcttatttactcttaattgaggtcatcaattttttttcagttggacttcaaagaccctagctacagcaatcggagtacctgtggactctcttaacagaaagataagtttctggacaagcaaggtgtggcaaatacataatactcgtacttagcatgctgcatttttgttagtaccttatgaattctttagtatccgaccaaatcactgtagcacattcatgcttggtgctcctaacaattatgatggaccatcaatcgtttttattgtgattttttcagtgtgaattctttagacttatgatcagatgggctagacagttaacacttcatatcatctatatttgagtttgcatgaaacatataagttgtggttaatataattggtaaacagaaatggatgtaggatatctttaaacatgatttaggctccatgacatctgtaaggcgttcctgaagagaacctctcaaatttagtatgattaaaccaacttatgatttaaacctaatttcatgctatatcgtagggcgtcctgacagaatcagttggtccagatgcggatgaccccacatttactgttgttgatagcacatctgattttaacaaaaacagcaccgtgaaccaactctctgaaaggtttcaaattactgaagaggaaggtgaaagttcgattgcgtctgttgaggaacaacttaggaaagagatgacagtttatgaggtttgtttcttgagatctcaagaatgtgttgaaaagaagatgccttcgttagttatgtcatttatcagttctccctacaccaaccaagtaatcattcatttgactccattcgctgtactgcagaaattcatcatcgggatgctaaccaattttggaagcatgacactggaccggatacacaacactctcaaggcaagataaatgggacactgtccattcatcctctctctatattaatcttttaacccattcgttaatttcatccaaaattgcttgtttcagatgttctgcatagccgagccatcatatgataaatcactgcagcaattgcagagttttctttctggtctagtgtcagacgaaaagctggagatgagggatggatcatacttgctaaggaagtaggagttacatggattagcctgttcatctgttagactagatatggaaggtaatcaactagtcacaccatcatcatctgatggttacactatgaccatccggttcctaaaatgtactccattttactcttcttgttgcaggaactgaagaatggaggccccatcctgcgccattcacctcactgcgtgcagtaatattctgcactcgctgttttgttccttgctgaggggatgacgaaagtagagaagcacaggaatcctaaagcttttgaatgttgttattgtgcgtatattgcactgttgacgcttgacgacgctctcaacgcgttcggttgttttccgacgtggataaatgcatatcttttcggtctgtaaatgacagaaagaaattcaaccagacttcttggcattaaatggcaggggcaatggccggaatgccttttggctactggcacccttcggtgtcagcttacttatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0484800, RefSeq:Os04g0484800