Os04g0485300

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Revision as of 11:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0485300| Description = Glucose-6-phosphate dehydrogenase| Version = NM_001059667.1 GI:115459063 GeneID:4336209| Length = 6368 bp| Definiti...")
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Gene Name

Os04g0485300

Description

Glucose-6-phosphate dehydrogenase

Version

NM_001059667.1 GI:115459063 GeneID:4336209

Length

6368 bp

Definition

Oryza sativa Japonica Group Os04g0485300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24659980..24666347

Sequence Coding Region

24661351..24661518,24661882..24661967,24662287..24662335,24662408..24662588,24662757..24662905
,24662991..24663059,24663384..24663442,24663908..24663941,24664226..24664300
,24664431..24664578,24664712..24664807,24665333..24665403,24665532..24665647
,24665762..24665807,24665920..24666090

Expression

GEO Profiles:Os04g0485300

Genome Context

<gbrowseImage1> name=NC_008397:24659980..24666347 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24659980..24666347 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcaggaggatcttcaccaaggtcaagacgaagcagctttaattctttatcaagagatctcgaactcccttcagagcaaggttgtctctctgttattgtcctcggggcttctggagacctagccaagaagaaaactttcccggcactcttccatctttttgcacagggatttatacaatcaggtgaagtgcatatatttgggtatgcgagatcaaacctttctgatgatgggttaagggaacgcattcgtggatacctcaaaggagcctcagaagaacatctctcagactttttgcaacatataaaatatgtcagtggttcctatgacagcggagaaggatttgagaaattgaacaaggaaatttcagagtatgagaagtcaaacaaatcagaaagccctcgcaggctcttctatttggcattgcctccatctgtctacccttcagtctgcaaaatgatcagaacatattgcatgaatccatctggatggactagagtcattgttgagaagccatttggaaaggacttggactctgcagaagaattaagtgcccaacttggggagctatttgacgaaaaccaactctacagaattgatcactacttgggaaaagagttggtccaaaacctgcttgtgcttcgttttgccaaccgcttgttcttgcctctttggaaccgtgacaatattgataatatacagattgtattcagggaggactttgggactgacgggcgtggtggatattttgatcaatatggaatcattcgtgacatcatccagaaccatttgttacaggttttctgtttggttgcaatggaaaagcctgtctctcttaagcctgagcacattagagatgagaaagtcaaggttctgcagtccgtgaaccctataaagcatgatgaggttgtccttggacaatacgaggggtacaaggatgaccctacagtgccagatgactcaaacaccccaacttttgcatctgtcgtgcttcgggtacacaatgaaagatgggagggtgttcctttcattcttaaagctggtaaagcactaagctcaaggaaagcagaagtccgtgtgcagttcaaagatgttcctggtgacatctttaaatgtaaaaggcaaggaagaaatgagtttgtcatacgccttcagccatcagaagccatgtacatgaaacttactgtcaaaaaacctggattggagatggccaccgagcagagtgaacttgatctgtcatacgggatgcggtaccaaaacgtcaaaattccagaggcatacgagcgtctcatattggatacgatacgaggagaccaacagcacttcgttcgccgagatgagctgaaggctgcttggcagatcttcactcccctgctgcacgacatcgacgaaggcaaggtgaagtctattccataccagcctggcagccgaggccccaaggaagccgatgaactgagcgagagggttgggtatatgcagacccacggttacatatggataccacccacccttgcatag</cdnaseq>

Protein Sequence

<aaseq>MSGGSSPRSRRSSFNSLSRDLELPSEQGCLSVIVLGASGDLAKK KTFPALFHLFAQGFIQSGEVHIFGYARSNLSDDGLRERIRGYLKGASEEHLSDFLQHI KYVSGSYDSGEGFEKLNKEISEYEKSNKSESPRRLFYLALPPSVYPSVCKMIRTYCMN PSGWTRVIVEKPFGKDLDSAEELSAQLGELFDENQLYRIDHYLGKELVQNLLVLRFAN RLFLPLWNRDNIDNIQIVFREDFGTDGRGGYFDQYGIIRDIIQNHLLQVFCLVAMEKP VSLKPEHIRDEKVKVLQSVNPIKHDEVVLGQYEGYKDDPTVPDDSNTPTFASVVLRVH NERWEGVPFILKAGKALSSRKAEVRVQFKDVPGDIFKCKRQGRNEFVIRLQPSEAMYM KLTVKKPGLEMATEQSELDLSYGMRYQNVKIPEAYERLILDTIRGDQQHFVRRDELKA AWQIFTPLLHDIDEGKVKSIPYQPGSRGPKEADELSERVGYMQTHGYIWIPPTLA</aaseq>

Gene Sequence

<dnaseqindica>1372..1539#1903..1988#2308..2356#2429..2609#2778..2926#3012..3080#3405..3463#3929..3962#4247..4321#4452..4599#4733..4828#5354..5424#5553..5668#5783..5828#5941..6111#ggtgggttgcaagccgcccggctgtgagaaagccaggcaggaggaggcgcagcagcactagccgcggtataaaacatccaagcgctcctccatcgtcgccaccgctccggtttgcctcccgcgcgagccctcgtcgacgccgccggtcagtactttgtcctccaccttgatcgctgttgctaatctccgggaaaaaaggaaatcgtctttttcttcttcttttttcttcttgttttgcttcggcgagatgtccgaggtttcttgggggttttcggctcgttgcagtgttttggggatcttcttctttttcttttcttgcggtggtgtttggtttgaggttttgtgttagcgttttcttgggttcttttttagatttctttttctctttttttttgggttccccctcaattgcgagcgtttctgcggcggtgtgtgggcgatgcgcgtcgcgtgcatgtgctgcggcgagtttgtttcgggtgcggatctcgtgcttgagctcttgatccctttcatgccgccttggatggagtaaagatagtgaattgtggttaagcttgagctagtgttctttcttttctcgtctgggttctcggctaggattcaggaactacccatttgtcctgcttttgggagccttttgactcttttcgtcgccggttgtttcgttgggatgttgttttgttgggggaaatggtggatctttttttgtgaaaaatgttctggccttttcgtttctttctctatagttgtttcactgtgactaaagtttagcaaggacaaattccagatttatgaacaagagtcccagtcctaaaagttatccaatttgtaatttagctgtaactaattcggctgaaaaaattagtgttgtgaggttgcagacggtaaaagatatccagtcacctttttgtcaattttcattttaatagcatgtgttggagttggttagttgtttcttgactgcacacgagtgcaccatgtgattggatgttgctatgttgaccttttgtgttgttagcatctggagataagttgatagtattttgttatcaaaagtgtttggtagattgatctattagaattagttcacctaaatggcaaaaattaagtgtcatatttggccttgtcatgctcagtttgcgggatactaatacaatgccatagctttaaattgtcaatgaatagaacaagcctaaccaggcaagctatttatatgttctgctactgctagccaattgtaaatgttccatttcaatgagttgtatgaaatttcttagcctgtgttccgatagtcttaagattgattgcatttttctcaccttttcacaggtatattgctgaaggaagaagagcaccaacctatttatcatgtcaggaggatcttcaccaaggtcaagacgaagcagctttaattctttatcaagagatctcgaactcccttcagagcaaggttgtctctctgttattgtcctcggggcttctggagacctagccaagaagaaaactttcccggcactcttccatctttttgcacaggtaatttgactcctgagtcctgacaataactagctgtttcatgtacaatttccaaaatctacactacgaaaggaacaatctagtgcacagtcatttgaggcattccagagcaaaggttcagttactcatacttgatcacaagtaaaagctcgaacacttgtactattttttcttcccagatacagatagtggatataggacacaattgaaaagaatgctggaaaattgcagagcaagcttctttttatccagcaagctgtttttacgaaccactcataaaatcttagtctttacaagcatgcaaaatgtgtgcagtgctataattcccaggttatcgttgatattcatgtccttgtgttacagggatttatacaatcaggtgaagtgcatatatttgggtatgcgagatcaaacctttctgatgatgggttaagggaacgcattcgtgggtatggtttctaaaagctgggtttttgacatcttggcatattgctgctgtatttagatatttctacttcttttaaacatatctagccactgaatttgaatgttatagctaggatagttgtcaataaaaacatttaatactctaattatggtcaatacgtactaaaaacaagcagtacatgatctgagatacattgtgtgtaatgcggtggcagttatatgttcgacatcttcatgaaattgtatttgtttttcctgtcccctatgaagttcaatcatcaattttgcacatatttatgcctttgttgtatattgctacagatacctcaaaggagcctcagaagaacatctctcagactttttgcaacatgtgagttgttgtttgtaatgtaaccaccattttgtgatgcgcacacgtcattatgataaatttctttttcagataaaatatgtcagtggttcctatgacagcggagaaggatttgagaaattgaacaaggaaatttcagagtatgagaagtcaaacaaatcagaaagccctcgcaggctcttctatttggcattgcctccatctgtctacccttcagtctgcaaaatgatcagaacatattgcatgaatccatgtaaagtttctttactattccatacgttattctttttggaatttatacaagctatgcgctctagttgaacaaaagcaatgaagcataaagttagtggaaaattcaggtcttcttggaagcatttcttcatcaagattcattttctttgcataaatgttctgtttgcagctggatggactagagtcattgttgagaagccatttggaaaggacttggactctgcagaagaattaagtgcccaacttggggagctatttgacgaaaaccaactctacagaattgatcactacttgggaaaagagttggtccaaaacctggtaatggctataattttgtcaagaatgtgggatgatttcctccgaatacttgactaactacttttgaaacaatcgcatttcacagcttgtgcttcgttttgccaaccgcttgttcttgcctctttggaaccgtgacaatattgataatatacaggtaagctggtcaatagttggtacttagcagtaggcaacttataggttatgattcaagaagtccaacttttataaactgcagttaatgcatcatgtagaagaaatattttgtagtcctcttgtcagttgattgctgaacttctttctgttttttggtggagaactgctgtgttctactggtataatttatcattgtctgaatggactaattgaatctaagaaactaaaaatataggtatatttcatttgtactattttaacagtatattgccaacaatatggcatgccatagtagctgcaatttataatcaatacaatcctgcagattgtattcagggaggactttgggactgacgggcgtggtggatattttgatcaatatgggtatgtagaaacattacatttcattagcacttttcttaattaagttttctattataaaatcgtaaccttacaagtcaaaagtgtacatatgagtatattatctagagctaagtgttgataaattttggaaatatttaaattctttgttaattcttactgattaagaaaagcatactctgcatttcagtgtggaaatgaacattttgctttattgagtttgcaagccaacatggaaattataattttcagtaacagaagtgttcagtactgaattcgaagagagtgcattcgctttgtatatgcctttcctgctatgagttaactaaaccatttaaggataatgtatactggatcatagtcctctctttttgcataattgtttattgcttaaacatgttttacacctcccatcgtgtatctcgttgttcctcaagggagtatctaacgttactcttgttgctgcagaatcattcgtgacatcatccagaaccatttgttacaggaaagtattctcaatatgtgtcaacattccatatgatatgatttgcatcattgtagtaacccccaccctgtcctaacaaagaaaacttttagtactttagtgactaggaaagaaaagcctcttcttacattaatttgtttaaaatttatattcacagatagtttcatgctgaattatatatggtcaagtagtacatgataaattccttgatgagaacaatgtctttagcctttaggagttaactgttccaacaacaatttaatgaactgttgcttcttctgcaggttttctgtttggttgcaatggaaaagcctgtctctcttaagcctgagcacattagagatgagaaagtcaaggtactttacctttctctattctctacatgtcaatactatattgcagcttgccaatactataatactaagagtattatgttttagtccgtttctttagtactaaataaaaccagttccctgttaatgccaggttctgcagtccgtgaaccctataaagcatgatgaggttgtccttggacaatacgaggggtacaaggatgaccctacagtgccagatgactcaaacaccccaacttttgcatctgtcgtgcttcgggtacacaatgaaagatgggagggtatgtctctcatcagtatatatacacattagggttctggagaaggacaacattgattttcgttttcccttcagattgtctttcagtggaccataattcttcattttaactctgtaatattcatatcctgcaggtgttcctttcattcttaaagctggtaaagcactaagctcaaggaaagcagaagtccgtgtgcagttcaaagatgttcctggtgacatctttaaatgtatgtgctataattacgtgcagttcatatcatggtgtactcaacccttttctgacaattttcatggcctaactatgtttccattacttccttatgaaatgactgagaatgccttaatgcccgtacataactaagcagtagaaagctataaccattttcagaaaatccacgcattgatgtggaagctgagaaagcatttaatttgcattgaattgatccatcgagataagctttatgtttttgggaagtctattgtgtacaaagcagaaaggtagataaacaagtaaaatggatcttcactcttcgttgccttgtaatttaagttcacctgaccttaccatggcatgttaatactgttaggctgctaaaattcacccatacgttgtattagataccaccgaggtctcaagaaattcagttgtgcaaatgcagatacctttttttccttttttctatcagtatgttcttttttgtatcttaattgcatgtgggtctaacatttgaactaaacacatcctggtgaaggtaaaaggcaaggaagaaatgagtttgtcatacgccttcagccatcagaagccatgtacatgaaacttactgtaagttcagctacttgtgtaatacataatactcctctccttggtcctaaagctacttccctactccagtaaaattttatcacattttgaatgttagtggtataatattagtcaatgacttcttccaggtcaaaaaacctggattggagatggccaccgagcagagtgaacttgatctgtcatacgggatgcggtaccaaaacgtcaaaattccagaggcatacgagcgtctcatattggatacgtgcgtatcatccttctaattgttcaaaatatcttccgttaaaaagatcttttcaacttcacagataacgtaatccgaccatatgcatttgatttaatacccacatatctacaggatacgaggagaccaacagcacttcgttcgccgagatgagctgaaggtttgtcagttgtcaccctgcatacctaaaacctctgaagagaaacttgaattctgtttccaagccgtttcgtttccgttttctccctaacatatggcacatgtgtgtccaggctgcttggcagatcttcactcccctgctgcacgacatcgacgaaggcaaggtgaagtctattccataccagcctggcagccgaggccccaaggaagccgatgaactgagcgagagggttgggtatatgcagacccacggttacatatggataccacccacccttgcatagacagacagacagacagacagtagtattgtttagctaggaagagtgcctctaaactgttattattgcggatatattcgtttcatattttcacgataacgcctgactagtgactacctggcgttgtaataatgtgttgcttcgtaagtataactgctattgtgaaataaaagtgcatgtttcgatcgatgaacagtgtcaggttttgggcattgtagatacactgatgatgaatggatggctgccaacattgttgtttg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0485300, RefSeq:Os04g0485300