Os04g0485800

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Revision as of 11:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0485800| Description = Cyclin-like F-box domain containing protein| Version = NM_001059670.1 GI:115459069 GeneID:4336212| Length = 3665 bp|...")
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Gene Name

Os04g0485800

Description

Cyclin-like F-box domain containing protein

Version

NM_001059670.1 GI:115459069 GeneID:4336212

Length

3665 bp

Definition

Oryza sativa Japonica Group Os04g0485800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24678147..24681811

Sequence Coding Region

24678765..24679244,24680032..24680913

Expression

GEO Profiles:Os04g0485800

Genome Context

<gbrowseImage1> name=NC_008397:24678147..24681811 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24678147..24681811 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctgaattactcgtcgtgctcgctcaccagctcgttcctgatgaacgaggactgcgctggcatgatgtgtgggtgcgggtgctggtcggaggaggcctcgccgctgtcatccggtggggtgaactccctgtggtgggatgagctggagtttgagctggagctggaagaggaagaggagttcgaccctgtggacctcttgcctaccgaccccttcggcatgaacctggagaccacgttcaccgcggcgatcgccagttgcattgaggacctcacagtcatgtccagtgctgggcgttttggagacagccgcgatgatgctgtttttgccgacctgagttattacttgaataaggcttttgttctatcaccggagtttcagtttggtggctatcggggtgtttttgaaggccccttggggtttggaggcctttctgctggtgaaggtgattcttttgggttcatgaagaacccttcttcctcaggaaatgctgatgattcttttgggttcgtggagacccctcctacctctggaaatgctgcattggagtgcggcgatgcagttgaagttgttcctgtccaggagggaggagttccacatgagggaatgctgtttgcccttgactaccttggccttcgtgacatcctctctgttgagagagtgtgtaagacattgcattcggctgtcagaaatgagcccttactgtggaagtccatccacattgaaggggatttgcgccagagaatttctgatgctggtcttctacacctgacacagaagtgcccagatactttgcagtgtctaagtattgcgtgctgcgtaaatatcacagaccaggggctgaaggctgttttagaaagtaatccaagattaacaaagctgagcattttgggctgcccacggttaactttggatggccttatttccaatctcaagtcatttaatacgaaggcggtgtttggaattaagcacctcagagttggaacactcttcagtttacgaaaggagcagtacgaagagttattatccttgttgaataccgacaagacacaggaggtgcataaccgggggccaagattccttcatgctaatcggtttttatcagattgcaatgatggatatgctcttgatattgagatgtgccctatttgtcagaactacaaacttgtttatgattgcccagatgaaggatgtgatgacagaagatctggtaattgcaaaggttgtactgtttgcatactgagatgttatgagtgtggaaggtgtgtagacaagttggcattcaaggagtcattttctctggactgggtttgccctaattgtcaagagaagaaggatctgtctcccccaatgaaatag</cdnaseq>

Protein Sequence

<aaseq>MALNYSSCSLTSSFLMNEDCAGMMCGCGCWSEEASPLSSGGVNS LWWDELEFELELEEEEEFDPVDLLPTDPFGMNLETTFTAAIASCIEDLTVMSSAGRFG DSRDDAVFADLSYYLNKAFVLSPEFQFGGYRGVFEGPLGFGGLSAGEGDSFGFMKNPS SSGNADDSFGFVETPPTSGNAALECGDAVEVVPVQEGGVPHEGMLFALDYLGLRDILS VERVCKTLHSAVRNEPLLWKSIHIEGDLRQRISDAGLLHLTQKCPDTLQCLSIACCVN ITDQGLKAVLESNPRLTKLSILGCPRLTLDGLISNLKSFNTKAVFGIKHLRVGTLFSL RKEQYEELLSLLNTDKTQEVHNRGPRFLHANRFLSDCNDGYALDIEMCPICQNYKLVY DCPDEGCDDRRSGNCKGCTVCILRCYECGRCVDKLAFKESFSLDWVCPNCQEKKDLSP PMK</aaseq>

Gene Sequence

<dnaseqindica>2568..3047#899..1780#ggagaagagaaaaaaaaaccaaaccccccaacgaaaacgcaagcgaaaaggagaggcgacgcgaggcgagcgatctcgcctttaccttagccaagccagcccagccgcccccacccagcgcaacgagcaggcaggccacgcacacgcactctctctcctcctcctcctctcctcttcttcacctctcctcccctcgcgcggcgcggaagccaaggggaagcaaaggaggcttcgagatttccgcggaacccccacgccaccaccatcctcctcctcctcctcctcttccccccatcctccgcctccacctattacccacatcctagggtttccccctcctcctccgcctcacctcccagtaccccatcctcccaccgccgcagccgcattcgaaggtgtgtatccatcgatccccgcctacccgccaacgactccccttcccgtctcgaggtgcctctggtccggggatcgatccttggttcctcgccgccgccgccgcttggtttcggtggggggtggagctttgtgttgctcggtgatctggaggcgtgattcgccgcgccggggccgtggattggttttgttgattggggggagttgggggtttcgatttgggagggagattgaggtggtggtggtggtgtatcgaggggccctggttttctctgctattggattggattgggatccatgatcgagattgctcggtgaagtttttggtcctaggggaattttttttatcggcccggatcaggaatggagggttctcttggggagatctagggttgcttgttctgtatcgtttctgtgtgcagaaaattagttgaaaaaaatcccaaaaaaaatagaaagaggaaaaaaaagagagagggggagagtggaggagagtttggaggctatggcgctgaattactcgtcgtgctcgctcaccagctcgttcctgatgaacgaggactgcgctggcatgatgtgtgggtgcgggtgctggtcggaggaggcctcgccgctgtcatccggtggggtgaactccctgtggtgggatgagctggagtttgagctggagctggaagaggaagaggagttcgaccctgtggacctcttgcctaccgaccccttcggcatgaacctggagaccacgttcaccgcggcgatcgccagttgcattgaggacctcacagtcatgtccagtgctgggcgttttggagacagccgcgatgatgctgtttttgccgacctgagttattacttgaataaggcttttgttctatcaccggagtttcagtttggtggctatcggggtgtttttgaaggccccttggggtttggaggcctttctgctggtgaaggtgattcttttgggttcatgaagaacccttcttcctcaggaaatgctgatgattcttttgggttcgtggagacccctcctacctctggaaatgctgcattggagtgcggcgatgcagttgaagttgttcctgtccaggagggaggagttccacatgagggaatgctgtttgcccttgactaccttggccttcgtgacatcctctctgttgagagagtgtgtaagacattgcattcggctgtcagaaatgagcccttactgtggaagtccatccacattgaaggggatttgcgccagagaatttctgatgctggtcttctacacctgacacagaagtgcccagatactttgcagtgtctaagtattgcgtgctgcgtaaatatcacagaccaggggctgaaggctgttttagaaagtaatccaagattaacaaaggttagtataacttaatcaaacttcttcaagtattgcacttatactgtatcaacaagtttgcttggaaatgttcattgtcataccaatatacgtttgatcttaacatactcccatcaatccaatgtaaatgtttaccataggactcttagtttgttactgtaatgggaaaggaaatctgcattgtagttttgcatgtagtgtaggctattttgctatcttatatacctttttggtgcatgactactgtttaggttatccattgtttctctagtgaccgccctgtctatgctctttcttttgttttagctaatattattcacttatctgtatgcctgctagataatattctcaaagtgaaactaattagatgagacaattatgcatggtttgcaagtgctgttgattagatgttttttgagtaatacataaaagcgaatctgaatagtggttacagatatttgcattaatactttgtagctgaccgcaatttgcatgcgattctttgttttatatgacatgcaacatgatggtgcaaagttgctgaagagcacctagctaagttcagcactgcgatttgtttaagttgttatattgttttttttttcatagtaggagcatcacaaaagaaaccttctgccatcagttttgtgaacacttttgatatttatatttacatgtttgtcagtttgacattctaattgtaaatacatatttgtctattctgccttctaacttaatagaaattcctcttgattaatttttatctaacacaaaatatttcacacagctgagcattttgggctgcccacggttaactttggatggccttatttccaatctcaagtcatttaatacgaaggcggtgtttggaattaagcacctcagagttggaacactcttcagtttacgaaaggagcagtacgaagagttattatccttgttgaataccgacaagacacaggaggtgcataaccgggggccaagattccttcatgctaatcggtttttatcagattgcaatgatggatatgctcttgatattgagatgtgccctatttgtcagaactacaaacttgtttatgattgcccagatgaaggatgtgatgacagaagatctggtaattgcaaaggttgtactgtttgcatactgagatgttatgagtgtggaaggtgtgtagacaagttggcattcaaggagtcattttctctggactgggtttgccctaattgtcaagagaagaaggatctgtctcccccaatgaaataggggtttgtcccccaatgaatactcttcctccgctaacagagaacagcatgcaatgctgtcatgcaagccatcttaacatatcatttctactgagaaaacagacaaaaaaaaaacgaagagtttgttattcttgaaggcgcagccatcctgacatgctacattagcttcttgcaagaaaaagaacaaaaaatagtagttagtttgattcagcaaaaaaaggaaaaaaaagattgtttcgctactattgtctgactggtgacatttcagaggtgagtttttcctgattgctttgatgttatacatcccattgaattaagtcttatgtgagagctcatttcctatctttggtttggggttgcttccagggattgcggttcaagagcggaagtacagcgtgaactttacgtcagtattgcagcagctgctgctgttcttggaatgttaagatcgaagatgaactgctctactcctttcacggtctcaccagagcaaataaagagaggactgctgtaatttaccttgtacatgcgtgccacaatgttgttgtagttctgagaacatttgtcacactaccatgtaatttacaactacttgcagagaaataaatgacttctaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0485800, RefSeq:Os04g0485800