Os04g0488400

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Revision as of 11:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0488400| Description = Similar to FLOWERING LOCUS T protein| Version = NM_001059685.1 GI:115459099 GeneID:4336228| Length = 4297 bp| Defin...")
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Gene Name

Os04g0488400

Description

Similar to FLOWERING LOCUS T protein

Version

NM_001059685.1 GI:115459099 GeneID:4336228

Length

4297 bp

Definition

Oryza sativa Japonica Group Os04g0488400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24790005..24794301

Sequence Coding Region

24790175..24790404,24790889..24790929,24791046..24791107,24791829..24792020

Expression

GEO Profiles:Os04g0488400

Genome Context

<gbrowseImage1> name=NC_008397:24790005..24794301 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24790005..24794301 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcaagggacccacttgtcgtaggacatgttgttggggatatcttagacccattcaacaaatcagcatcactcaaggtcctatacaacaacaaggaattaacaaatgggtctgagctcaaaccgtcacaggtagcaaatgaaccaaggattgaaattgctggccgcgacataaggaacctttacactctggtgatggtggatcctgactcgccaagtccaagcaacccaacaaaaagagaataccttcattggttggtgacagacattccagaatcggcaaatgctagttatggaaatgaagttgtcagttatgaaagcccaaaaccaactgcagggatacatcgttttgtctttatattatttcgccaatatgtacaacagactatttatgcaccaggatggagaccaaatttcaatacaagagatttttccgcactgtataatcttggacctcctgtggcagcagtgttcttcaattgccagagggagaacggatgtggaggcagacggtacattagataa</cdnaseq>

Protein Sequence

<aaseq>MSRDPLVVGHVVGDILDPFNKSASLKVLYNNKELTNGSELKPSQ VANEPRIEIAGRDIRNLYTLVMVDPDSPSPSNPTKREYLHWLVTDIPESANASYGNEV VSYESPKPTAGIHRFVFILFRQYVQQTIYAPGWRPNFNTRDFSALYNLGPPVAAVFFN CQRENGCGGRRYIR</aaseq>

Gene Sequence

<dnaseqindica>3898..4127#3373..3413#3195..3256#2282..2473#atggattccaactctcaacctgacgttcgcttcgtccacgtaactgagctctttgcctttcctgctaccctccagccgcctcctaaaagaagccatgaccacaaatgaaatatttggtgagcaacctgggtaactaccattagcattttttttttgttggcaagccgttttgtactaaaccatgccctactgggcttgtttgggtccttttgaactcttttctttcctcttaatataatgatgtgcagttcttcttttgcgcgttcgagaaaaataaatgttaactgaaattaccttcctggagtttatcttgcaaaatgcttaataggatgagacatttaggtgccagcaggagtggaggactgagaaaaccagtggcttgattcctcgatgcacagctcaaggcctgcgttctgcaagtgggaacataacatcagaagggggaggcgtgattgacataaaatctttggtgcgaattacaggaataaaatgggattccgcgggcccctgttggtcaagaataaatgtagtaggcctttgccttatctatctctgctttctgcgtccgctttatgtagagtccatcagctccgcaggcatattcctgtcatgataagaagattaggacgttgtattacacaaatcatattctgtcagaaagcaaggaagacagagcggcagacatttcaaaaggcaaatgcacccccctaggagtattcgtaagaagctgcattctgacctatttgtcagagatcatattccatcaggaaaactagtaaaatagagatgtacagagtacaataaacttctatagaaagtttattagcagaatatgcgtactgtcaacagcccttaagtgaaattctgagtttcgtgtgaaagtttgaatcttgagaacagctgacaagtgagtttagatgttcagttccgcaatatgagtgattgtgtgtcaagcaacttataaaatgattctagaaggcctactgcccttggaatgtgacttggactggtgttttaggtagtagcttgaactcgggggggtgagatcatagaactacagagacacagaaaagggtaaatattttggacaaaaaaaatagcagactgattttatattataattgactgcaccacctattatgcatattaaaataaaagaaaattggattttcaaattttgttacaatagagcagatattgtgacagttcaaaacatgccaaaatgtttgttccgaaagaaggctgttttagtctttgagcaaaatctcgcttgatagataaagaacaggactaatatgtttagaactttagatagacatacttggagagcagtgaataacagaatgttgtagatcaaataaagccaatttaccatcgtcatcattatctaagaacccaccctaacctataatctttgaatgacgaaaacttgattctgaattctagatgtcggcatgcactgaaataaaccacacagctgtaccactaatttgcttatcaagcatctacttgataaaagaactgctataaaggaagacaggaattattgatttggtagaagacagtgaacaagtgtcaagaaaatcctctagcacttttttattgttgcagtccaatattcccaaccaatcatgctcaagaaacctcttttgtaatttatattgagaaatgatcctcactgcaatgccatcaaatagtaggtacgctctaacttcttgttgtctacagtatggagatagaagtatagaaccttggcaagtattgccctaccagggggctgatgcttacttatcccatttgcctacaactcttactgaggaagagttacagaaagttcttgttgagaatgagaaacatgaggtgtcaatctaaaagacaagtccaaaggcaatctacttttcagcaggagcgtatcatgtctagggttgcagatatagggaataagtgagagtggtcagcagattttattcatcgatgtggaatagcaatgaacactccttatttttatgtaggctatgagagtggacataccacaatatttccagtgatggcaaccaatataatacagtacacctgcctacgccttaaagttaagattccaagtcttcaggagctaacaactcctgataccacgaatgccttcagcacttagattgtgagtatatatagggcacatacctgcactcatcagttcacccaagttcaacatttctgctcaagttagcttcttagcacagcctcttcttgctcaactcctgaagatcatcaatcttcactagccatgtcaagggacccacttgtcgtaggacatgttgttggggatatcttagacccattcaacaaatcagcatcactcaaggtcctatacaacaacaaggaattaacaaatgggtctgagctcaaaccgtcacaggtagcaaatgaaccaaggattgaaattgctggccgcgacataaggaacctttacactctggtaagtccaaatcctcattactgcattgaacaatattgagttcataaggaatactatttggcatctagcccagggggaaaaaagcatgtgcctaattacacgagccccatccaactgtgtagagtgctatacctgtagcatgtgctattagtgttcagtacgtatagaacactggaagcaaatattctcagctttctgtaagttgtacaacttcatctgtgtgactgggtggattgaaaaagacctttgcacctctatttctttatttcgtgtaaacaaagatattctgtttgcttttgataggtcagcacatatacctgcatatttgaatgctgcctgtggatcaaaattatgcacgtcagccatgaagtataggaatctgaatcattatgattagatgcattaaaaaattaactgtactttgctagaatcatgaagatgcattagtagtgacacaaccattgaagctaacaaaataatagtgttatagaaagttaattttctaaagcatcaaagttatggagagccttgtatctgggttgtgtcaattaagaaagcaatggccatataatcttagtggaacacaagtaactgagatgcacagttcatggaccttataccctcaaattcaaagtttttatcctttgcttggaatgataatgttttatttaactaaaaagttatatttttccctagaagtaacacgctaacttgcttttaggtgatggtggatcctgactcgccaagtccaagcaacccaacaaaaagagaataccttcattggtaaaatctgaaacatttcagaattaattggtttatacaattctacttctccacttgtgtgtgacgtgacaaatacaaaatcaaaagctattcttatggttatttgcatgtgacaggttggtgacagacattccagaatcggcaaatgctagttatggtgggttattcctattcttttcttttctgaatttaatgttttgatggcatcaagtcatccaagattttaaagcaaatacatatcgtgctggtccagatgacaacataattaaaaataaaaaactagcaaagtgtatcatttgtagttacatttaataaacactaaaactaaactataagagcatatagtaaatctgaaggataacgatacaccaatgtcatacctggatttcagatgataaacagcagatcgtcctgccttcgacatcaacccatggaaataatttcttttaactatgattgtcataaacttgtctgatctgactgcactgagctcaacatgagcatccctatgctatttttttattaacctaaacttgaccaatggatgtccatacttcatgcatagaacttttaagtttgagaggctgagagcaatactcatatgaactgactttaacatgttttaacaatttttattacaggaaatgaagttgtcagttatgaaagcccaaaaccaactgcagggatacatcgttttgtctttatattatttcgccaatatgtacaacagactatttatgcaccaggatggagaccaaatttcaatacaagagatttttccgcactgtataatcttggacctcctgtggcagcagtgttcttcaattgccagagggagaacggatgtggaggcagacggtacattagataaaagtcaggatcattcatagccctctacaagaagaggtgatattcatgtgagaagatgaatggggtcaggcacatcgcaacgtgctggtcaatggtggaccttttaatgtatcttcatttaagaactactacctttgatacgtatccaggcactaaacaaggtgctttacg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0488400, RefSeq:Os04g0488400