Os10g0113000

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Revision as of 08:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0113000| Description = Similar to Chalcone reductase homologue (Fragment)| Version = NM_001070578.1 GI:115480899 GeneID:4347977| Length = 1...")
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Gene Name

Os10g0113000

Description

Similar to Chalcone reductase homologue (Fragment)

Version

NM_001070578.1 GI:115480899 GeneID:4347977

Length

1995 bp

Definition

Oryza sativa Japonica Group Os10g0113000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:845399..847393

Sequence Coding Region

845447..846187,846969..847193

Expression

GEO Profiles:Os10g0113000

Genome Context

<gbrowseImage1> name=NC_008403:845399..847393 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:845399..847393 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccatcccggaggtgccggcgagcgagcttatccagaccatgccgcgcgtcggcatgggcacggcggcgttccccttcacctcctcggaggacaccaccgccgccatgctccgcgccatcgagctcggctaccgccacttcgacacggccaggatttacgccaccgagggctgcgtcggcgaggcagtcgcggaggccgtccggcgtggcctcatcgcctcccgcgccgacgtgttcgtcacctccaagatctggtgcagcgacctgcacgccggccgcgtcgtgccggcggcgagggagacgctccgcaacctcgggatggactacgtcgacctgctccttgtccactggccggtgagcctcacgccgggcaactacgacttcccgttccccaaggaggtgatcctgccgtcgttcgacatggagggcgtgtggcgcggcatggaggagtgccaccgcctgggcctcgcgcgcgccatcggcgtcagcaacttctccgccaagaagctggagcagctgctgtcgctcgccgccgtgcggccggcggtgaaccaggtggaggtgaacccgatgtggcagcagaggacgctgcgggaggtgtgccggcgggagggggtgcagctgtgcgggtactcgccgctgggggcgaagggcacgccgtggggcagcgccgccgtgatggactccggcgtcctgcaggagatcgccggagccaagggcaagacgcttgctcagatttgtttgaggtggttgtacgagcaaggtgatgttttattggtgaagacatataatgagaagagaatgaaggaaaatctggacattttcaactgggagctcacagatgaagagagggagaggatcagtcagctgccccaactgaggggcctgcctggattggaattcatctctgaccatgggccttacaaatcagttgaagatttgtgggatggtgacgtctag</cdnaseq>

Protein Sequence

<aaseq>MATIPEVPASELIQTMPRVGMGTAAFPFTSSEDTTAAMLRAIEL GYRHFDTARIYATEGCVGEAVAEAVRRGLIASRADVFVTSKIWCSDLHAGRVVPAARE TLRNLGMDYVDLLLVHWPVSLTPGNYDFPFPKEVILPSFDMEGVWRGMEECHRLGLAR AIGVSNFSAKKLEQLLSLAAVRPAVNQVEVNPMWQQRTLREVCRREGVQLCGYSPLGA KGTPWGSAAVMDSGVLQEIAGAKGKTLAQICLRWLYEQGDVLLVKTYNEKRMKENLDI FNWELTDEERERISQLPQLRGLPGLEFISDHGPYKSVEDLWDGDV</aaseq>

Gene Sequence

<dnaseqindica>49..789#1571..1795#attgtcctcctctccactacactacactgtgcacttctgcaggttgcaatggccaccatcccggaggtgccggcgagcgagcttatccagaccatgccgcgcgtcggcatgggcacggcggcgttccccttcacctcctcggaggacaccaccgccgccatgctccgcgccatcgagctcggctaccgccacttcgacacggccaggatttacgccaccgagggctgcgtcggcgaggcagtcgcggaggccgtccggcgtggcctcatcgcctcccgcgccgacgtgttcgtcacctccaagatctggtgcagcgacctgcacgccggccgcgtcgtgccggcggcgagggagacgctccgcaacctcgggatggactacgtcgacctgctccttgtccactggccggtgagcctcacgccgggcaactacgacttcccgttccccaaggaggtgatcctgccgtcgttcgacatggagggcgtgtggcgcggcatggaggagtgccaccgcctgggcctcgcgcgcgccatcggcgtcagcaacttctccgccaagaagctggagcagctgctgtcgctcgccgccgtgcggccggcggtgaaccaggtggaggtgaacccgatgtggcagcagaggacgctgcgggaggtgtgccggcgggagggggtgcagctgtgcgggtactcgccgctgggggcgaagggcacgccgtggggcagcgccgccgtgatggactccggcgtcctgcaggagatcgccggagccaagggcaagacgcttgctcaggttggttgatatacttattttctaaattttgtaggagaaaaattcataccatatatactactccctccaattccattattcttaaaatttttaacaaggaaaaaagtccaaatacccctctaaactttggatgcaaatccacctagcaccctaaactttaaaaccgaacatctaaccccctaaactttgcaataccatctatattactccctaagatagttttggagagtggttttgcatattttggatgtttaaaagaacaactctaaataactaatataacatatttacatatcatcagttgtaagccatcaatttatccttatactgtgataccatactattattatgtttttacttgtttgtaagtgaaagctagtaaccggtaaaaagaaaactttaagtgaatatttcaatatatatgtctaatgtttatatctcgtgatcaaactcaaccaacttatatacaaattacataaaaaatcactatgataaaataaataaataattttttatttttattataggattttgtaagacaaatctaaatatgttgttgtagtgcttttaaaataaatatttaaaaattatcgatagttaaaattataaaagtttgacccaaccatgtttaaaacgtcaaaaattatggaatcaaaggatgtatatcaaaagtgatcaaaacacgaaagtttagaaattaaatgaatataaaatatttaattaaaccaaacaaaaaatcaggtcaaataaagtttcactatataattactctgtcgtgcagatttgtttgaggtggttgtacgagcaaggtgatgttttattggtgaagacatataatgagaagagaatgaaggaaaatctggacattttcaactgggagctcacagatgaagagagggagaggatcagtcagctgccccaactgaggggcctgcctggattggaattcatctctgaccatgggccttacaaatcagttgaagatttgtgggatggtgacgtctagcaagctacttagatacagtggagtatatatctaaataatcatgatggatcatgatgtggatctatcttaattatgtgcggcaggcatgggcacggcaccattcccgtacacgttctgcgatcaattaatgtatggaccatacatgtatattaattgctgtatacctatccacttatttaaaacacgtcgacacgttcacg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0113000, RefSeq:Os10g0113000