Os04g0490900

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Revision as of 11:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0490900| Description = Amino acid/polyamine transporter II family protein| Version = NM_001059703.2 GI:297602964 GeneID:4336246| Length = 1...")
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Gene Name

Os04g0490900

Description

Amino acid/polyamine transporter II family protein

Version

NM_001059703.2 GI:297602964 GeneID:4336246

Length

1794 bp

Definition

Oryza sativa Japonica Group Os04g0490900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24933007..24934800

Sequence Coding Region

24933007..24933351,24933682..24933799,24933848..24933951,24934132..24934800

Expression

GEO Profiles:Os04g0490900

Genome Context

<gbrowseImage1> name=NC_008397:24933007..24934800 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24933007..24934800 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgctcgccgacgacctggccgccgtcgagcgcggcggccacatggtgccatcgaaggcggcgggtgtcgacggcgacggggagccgcggcggacgggcaccatgtggacggcgagcgcgcacatcatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggggcgtcgcgcagctggggtgggtggccggccccgcggtgatgctgctgttcggcgccgtcatctactgctgctccgtgctcctcgtcgagtgctaccgcaccggcgacccgtacaccggccagcgcaaccgcacctacatggacgccgtccgcgccaacctcggcgggaccaaggtcgtgttctcgcagatccccaacctccacaagatgtggtggctctccacgctcgcctccgccatgtcgctgtcctactccgccatcggcatcgccctcggcgtcgcgcagatcgtagtgcttgacatgtttgagatcgagtttgcagcgaacgggggaatcaggggcaccatcacgggcgtcttcgtcggcgccggcgccggcgtcacctcgatgcagaaggacacggtgaagccggtggcgccgccgtcgacggagacgaaggtgatgaggaaagcggtggcggtgagcgtggcgacgacgacggcggtgtacctgatgtgcgggtgcgtcgggtacgcggcgttcgggaacgactcgccggacaacctcctcaccgggttcgggttcttcgagcccttctggctgctcgacctcgccaacgccggcgtcgtggtgcacctcgtaggcacgtaccaggtggtggcgcagccggtgttcgcgttcctcgacgggcgcgccgcggcgggcgcgtggcccgggagcgcggcgctgggcaagaggaggcgggtgctccgcgtgggctccctggccgagatcgaggtgagcccgttccgtctggcgtggcgcacggcgttcgtgtgcgtgaccacggcggcgtccacgctgctcccgttcttcggctccatggtggggctcatcggcgcggcgtcgttctggccgctcaccgtctacttccccgtggagatgtacatcgcgcagcgccgggtgccgcgggggagcgcgcagtggctgtccctccaggcgctcagcgccgggtgcctcgtcgtgtccgtcgccgcctcggcgggatccatcgccggcgtcgtggaggcgttcaaggcgcacaacccgttctgctggacgtgctga</cdnaseq>

Protein Sequence

<aaseq>MSLADDLAAVERGGHMVPSKAAGVDGDGEPRRTGTMWTASAHII TAVIGSGVLSLAWGVAQLGWVAGPAVMLLFGAVIYCCSVLLVECYRTGDPYTGQRNRT YMDAVRANLGGTKVVFSQIPNLHKMWWLSTLASAMSLSYSAIGIALGVAQIVVLDMFE IEFAANGGIRGTITGVFVGAGAGVTSMQKDTVKPVAPPSTETKVMRKAVAVSVATTTA VYLMCGCVGYAAFGNDSPDNLLTGFGFFEPFWLLDLANAGVVVHLVGTYQVVAQPVFA FLDGRAAAGAWPGSAALGKRRRVLRVGSLAEIEVSPFRLAWRTAFVCVTTAASTLLPF FGSMVGLIGAASFWPLTVYFPVEMYIAQRRVPRGSAQWLSLQALSAGCLVVSVAASAG SIAGVVEAFKAHNPFCWTC</aaseq>

Gene Sequence

<dnaseqindica>1..345#676..793#842..945#1126..1794#atgtcgctcgccgacgacctggccgccgtcgagcgcggcggccacatggtgccatcgaaggcggcgggtgtcgacggcgacggggagccgcggcggacgggcaccatgtggacggcgagcgcgcacatcatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggggcgtcgcgcagctggggtgggtggccggccccgcggtgatgctgctgttcggcgccgtcatctactgctgctccgtgctcctcgtcgagtgctaccgcaccggcgacccgtacaccggccagcgcaaccgcacctacatggacgccgtccgcgccaacctcggcgggaccaaggtgaggctctgcggcgtgctgcagttcgccaacttcttcggcgtctgcgtcggcatcaccatcgcctcctccatcagcatgctgtacagtaaaccaaaaccctttctctgatctctctccgccgccggcgccgcgcgccacatctcgccgtgaatctttacgctttctttcttcgcttcttgtgcgtgcgcgcgcgcgcgcgcgacgcggcgaacggcggcgagcagggcgatcaagagggcggggtgcttccacgtgagagggcacgaccagagggaggcgtgcggcggctcgagccggccgtacatggtggtgtacggcgcgctgcaggtcgtgttctcgcagatccccaacctccacaagatgtggtggctctccacgctcgcctccgccatgtcgctgtcctactccgccatcggcatcgccctcggcgtcgcgcagatcgtaggtgagtgaggagcgaggggctcgttgtttcgttgtggtttttttgaagtgcttgacatgtttgagatcgagtttgcagcgaacgggggaatcaggggcaccatcacgggcgtcttcgtcggcgccggcgccggcgtcacctcgatgcagaaggtttggcggagcttccaggcgttcgggaacatcgcgttcgcatacggcttctcgttcatcctcctcgagatccatgcaagtcaccgttcatccggatatcactaattcagtatcccgtttgatctttcttgattgcttattactatgcatgtgtgtttgtgttcgatatgttccattcaggacacggtgaagccggtggcgccgccgtcgacggagacgaaggtgatgaggaaagcggtggcggtgagcgtggcgacgacgacggcggtgtacctgatgtgcgggtgcgtcgggtacgcggcgttcgggaacgactcgccggacaacctcctcaccgggttcgggttcttcgagcccttctggctgctcgacctcgccaacgccggcgtcgtggtgcacctcgtaggcacgtaccaggtggtggcgcagccggtgttcgcgttcctcgacgggcgcgccgcggcgggcgcgtggcccgggagcgcggcgctgggcaagaggaggcgggtgctccgcgtgggctccctggccgagatcgaggtgagcccgttccgtctggcgtggcgcacggcgttcgtgtgcgtgaccacggcggcgtccacgctgctcccgttcttcggctccatggtggggctcatcggcgcggcgtcgttctggccgctcaccgtctacttccccgtggagatgtacatcgcgcagcgccgggtgccgcgggggagcgcgcagtggctgtccctccaggcgctcagcgccgggtgcctcgtcgtgtccgtcgccgcctcggcgggatccatcgccggcgtcgtggaggcgttcaaggcgcacaacccgttctgctggacgtgctga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0490900, RefSeq:Os04g0490900