Os04g0491500

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Revision as of 11:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0491500| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001059706.1 GI:115459141 GeneID:433624...")
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Gene Name

Os04g0491500

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001059706.1 GI:115459141 GeneID:4336249

Length

5469 bp

Definition

Oryza sativa Japonica Group Os04g0491500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24959533..24965001

Sequence Coding Region

24959825..24960632,24960758..24960876,24962353..24962793,24963600..24963817,24963950..24964037

Expression

GEO Profiles:Os04g0491500

Genome Context

<gbrowseImage1> name=NC_008397:24959533..24965001 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24959533..24965001 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggttggaggctttgtggactggaggggaaacccgatagacagaaaggtacatggaggagtcagagctgcatggtttatgttctttctgtcagtggtaacaaacatggaaaatattccaaacatgctgaatttggttacatatctccatggaaccatgcatatgggagtttcaagctctgcaaccacagttactaacttcattggtgccacatctggatttgctttattaggagctttcctctcagactcgtacatcactcgctctagaaccatactactctttggtccgttggagtttctggctcttggattgctcgctctgcaagcctacctcccctcactccatccaccaccttgcaatattgaagcagagctaagcaactgcgaagaggttcatggcttcaacaccgtcatattgcacataggcttgtacacctgggcattcagtgaaggctgtatccgtgcttgcacgccatcacttggagcagatcagtttgaccatgaagatccctctgaatcccgccaacaatccagtttcttcaactggttcacctttggaatctccttaggaggatttataggattgattctaatagtgtggctcgagaactacaaggggtgggacattggatttggcgtgtgtgcactgctaattcttcttgggttgctcatagttgccactggcctccctttctaccgtaatcaagtaccagaaggaagccctctaactcggatactgcaggttcttgtggttgcattcaagaacaggaaatatgaacttcccgagaaacttgaggaagcacaagaaaaccgtaatggactggattctattgaagtaccacgtcctacaaattttctgaaatttcttgacaaagcctccatcaaccatggtgaagatggagcctggtcagtttgcagcacaatgaaagtggaggagacaaagattgttcttcgaatgcttcccctcttcatcagctccatgatcggttatatctcaaaccctctgctcctcactttcactgtgcaacaaggtagcatgacaaacacaaggctgggcaagatacatatctcccccgcgacgctctttgtgatccccatcacattccagatgctaatgctcgccgtctatgatcgcttccttgttccgttcatgcgcaagcgcacaggatatgcctgcggtatcactcacctgcaacgtgttggcttaggctttgcctccatgatagttgcatcggccgttgcagcagtcgtcgagagaaagaggaaggaggcagctgtgcagatgtccctcttctggcttgcacctcagttcttcttgcttggcgtgtcagacgttacatcgttcgtcgggctgcttgagttcttcaacagcgaagcaccaaaggatatgaagtccattggcacggcgctgttctggtgcgagctgggtctcgcttcatggatgggcacgttcctggtggagctggtgaacaaggctacgaggcatggacaccatagagggtggctcgagggtacaagcttgaacaacagccaccttgacttgttttactgggtggttgctgttatcgggctgcttggcttcttgaattacctgtactgggcgaagaagtatgcctaccggcacaatccacgcatggtcaccccatcagctgatcaggactcaccgtga</cdnaseq>

Protein Sequence

<aaseq>MVVGGFVDWRGNPIDRKVHGGVRAAWFMFFLSVVTNMENIPNML NLVTYLHGTMHMGVSSSATTVTNFIGATSGFALLGAFLSDSYITRSRTILLFGPLEFL ALGLLALQAYLPSLHPPPCNIEAELSNCEEVHGFNTVILHIGLYTWAFSEGCIRACTP SLGADQFDHEDPSESRQQSSFFNWFTFGISLGGFIGLILIVWLENYKGWDIGFGVCAL LILLGLLIVATGLPFYRNQVPEGSPLTRILQVLVVAFKNRKYELPEKLEEAQENRNGL DSIEVPRPTNFLKFLDKASINHGEDGAWSVCSTMKVEETKIVLRMLPLFISSMIGYIS NPLLLTFTVQQGSMTNTRLGKIHISPATLFVIPITFQMLMLAVYDRFLVPFMRKRTGY ACGITHLQRVGLGFASMIVASAVAAVVERKRKEAAVQMSLFWLAPQFFLLGVSDVTSF VGLLEFFNSEAPKDMKSIGTALFWCELGLASWMGTFLVELVNKATRHGHHRGWLEGTS LNNSHLDLFYWVVAVIGLLGFLNYLYWAKKYAYRHNPRMVTPSADQDSP</aaseq>

Gene Sequence

<dnaseqindica>4370..5177#4126..4244#2209..2649#1185..1402#965..1052#gggcgagatcaccgccccccaccgtcccggagcgccggcgtgcggcgagcctcgagggcgacgccgcctctcctcacgagccacgaccgtgatgctctgaggccgaggccgaggccgacgccgacgaggaggacgagccgaacggcccgaaccatccgccgcccgctcgcgttcaggggtaggaggggttggggggaagagtagtgaatagtgatcaacaaccagcctccatgggaagccccccgcggcgagccaatgcgctgggctgcctgccacggcggttgtgcatgtccatgggtaagaccgtaaaggcgtaaagagcagctattttaccattgctgtttcatactgaagtagcagtctaattttcacctttttttgcctaccattcttgcagcatgtccattgaaattttgctcagtcttcctcttcgataggagagcatggcctcctgcttattccctcgtagtcctcccatgcaccgatgaagtgattgagcgagtcatctgttacattgggggtggttaagtggtttgctgggttgggttgcattgcagccctgcggcctcgaaggaaggcacttcagatgttcgatgaaatgcttcacctgtagcctcctgcctggcactttttcaggcgcgatgtcctgagagaaggaaaaatacagtgcgccggataattatcgtatcttgcttactgcattcttggcagttgggctgcacagtggtgactctataagtcaacaatcgtctgtggttggttctgttgggggcaacatctataatctattgcatagaatagccaatgatctttcacttgtcatctttctttatttagctggggccactttgcgaggaaaaaaaaagtataccatatgtctatatatacctcctatgatggaatggaagtatgcaatgaagaagtagtaatcaagtgcaagaagacgctaattcatctgtagctgatggtggttggaggctttgtggactggaggggaaacccgatagacagaaaggtacatggaggagtcagagctgcatggtttatgttctgtaagttgctctactgagtccattgattaatatattgttcctggcttcttgcgttatttgtgtaattactcactaacagtaggttttcctattgaaatcgaagtgtttttttatgcttgttctctcttgtagttctgtcagtggtaacaaacatggaaaatattccaaacatgctgaatttggttacatatctccatggaaccatgcatatgggagtttcaagctctgcaaccacagttactaacttcattggtgccacatctggatttgctttattaggagctttcctctcagactcgtacatcactcgctctagaaccatactactctttggtccgttggagtttctggtaatttgcctcatggtctattcaacggtctatatattctgggtatcatccattgaaatttcttgatttcactttctttttatctttactagtgacagcctgccaagagaaggggaaaaaaaacacagtactcgtcgcagttattttaatcacagctaatgaatgtaaactaatagcatcatatagttacatcagatgttgaaagaaacccatgaaaattatttcacatgttgcctctgttttttcttctaacattattctcagctgtaatcacaccgatatcgaaaaagctgcaggttgcctgaaacttcaaaagcttaggttgctaaatcgttttcccaagctcaaagtagctgggaacttgggatacatacaaaacaagattcttacaagttgctaaggaaaacaattttatatctccttcagaattagttaggtgtgaattaagccaaaacaccagatcatattctgttgaacttttttttttttttgaaaggaatatattctgttgaatttttaactatggtttggtcatcacctactgtgggtctgtggcataaccttgatccgaagcctacttgataaagatattaaaggacctctatgtaaaaaagtacatcggcatcttcttgtttgcttgtggttaaattagcattgattttcttcagacaattaacttatagatactttcactagtttaaaacttaatatctggatataagtttctatctttgctcacagccaccgaacaagtagtttctgcttcatactggtttaagttccaaggtaacaatctacttgtgcaggctcttggattgctcgctctgcaagcctacctcccctcactccatccaccaccttgcaatattgaagcagagctaagcaactgcgaagaggttcatggcttcaacaccgtcatattgcacataggcttgtacacctgggcattcagtgaaggctgtatccgtgcttgcacgccatcacttggagcagatcagtttgaccatgaagatccctctgaatcccgccaacaatccagtttcttcaactggttcacctttggaatctccttaggaggatttataggattgattctaatagtgtggctcgagaactacaaggggtgggacattggatttggcgtgtgtgcactgctaattcttcttgggttgctcatagttgccactggcctccctttctaccgtaatcaagtaccagaaggaagccctctaactcggatactgcaggttataaacttaaactagcatggtggcccgcgcaatcatcatcgttatatttttcccataaaataccatatatatatattcacattttattattaaaatagattgaaatgacaacataattttaaattatttatgtactaacttgataaaactaaccaatgcgcaatattcatactgtaatgtatatgcgtgaaagttatttattgttttttactttagttatttctaaattttatttatatatataatttatacttctctttcaatatttcttatctattaatttcatatttctgttatttttaaattgtactcctatatgaacaatagactgttcttccaatatttcttatttttaattatgactttatgttatttataaattgtattcctatttggagtctagattcttcttccaatattttttttaatttcaaatttcaattatctctaaattatattcctatatggactctagactctttttccaatcttcttttttttttaaaaaaattatgaatttcagttatttctaaatatatttttatatggactctaaactttacttttaatttttcttattttttattttcgactttcaattagttctaaattcatatataggctctagactcttctgtcactattccttatttttttatttcgaatttctgttatttctaattgtatttttatggactctaaacccatcttctagtattccttatttttaaattccaaattttagttatctctaaattgtactcttatatagaggttccttttattaccaatctaatatgttaatttgtagcacacaaatttatttgttagacgatcctttgctataagattatggcattcttgggtgccaatttattattgaagtggattccggcggcaaaacttccgtcttgctaatttattggtaaagctgattgcggctggaagatttatggctgaatatttgtgttttgcgttttgttttcattgctaggagtatcgatctatttattactacgggatgaatcgtgtacaattcagaaccgtataaactaataccgccatggatgctaattccatgaaagaatctaattatgattggtttgttaactgttgtccgtttcctacactataaccatacatgaatatttattgttatatcacagttccaaaaagaatcctgcccgtttgtttttttgcttctaattttcatccgattaagagttgtgatcagtttcctaaacctatacaatgcgtgcgtgagtatgttcctagtatgtcatgtttccaaaagaataatgtccgtttgtttttttttctttttttctttgattaacgtggtaatttttaggccgcgagagcgaacgtggtggctcttttttctattgctttatagatataatagatttccatctctcaggagaaaatcaccattccatatctgccgcctatctgaaaaattgccttttccaggttcttgtggttgcattcaagaacaggaaatatgaacttcccgagaaacttgaggaagcacaagaaaaccgtaatggactggattctattgaagtaccacgtcctacaaattttctgaagtaagcttcagcaagatacacacattttttcagttaagggtatcacacatcatgcatggattttaagagaatatgattctttagtaaatgttataaactcttctgcacacttttttttttgccagatttcttgacaaagcctccatcaaccatggtgaagatggagcctggtcagtttgcagcacaatgaaagtggaggagacaaagattgttcttcgaatgcttcccctcttcatcagctccatgatcggttatatctcaaaccctctgctcctcactttcactgtgcaacaaggtagcatgacaaacacaaggctgggcaagatacatatctcccccgcgacgctctttgtgatccccatcacattccagatgctaatgctcgccgtctatgatcgcttccttgttccgttcatgcgcaagcgcacaggatatgcctgcggtatcactcacctgcaacgtgttggcttaggctttgcctccatgatagttgcatcggccgttgcagcagtcgtcgagagaaagaggaaggaggcagctgtgcagatgtccctcttctggcttgcacctcagttcttcttgcttggcgtgtcagacgttacatcgttcgtcgggctgcttgagttcttcaacagcgaagcaccaaaggatatgaagtccattggcacggcgctgttctggtgcgagctgggtctcgcttcatggatgggcacgttcctggtggagctggtgaacaaggctacgaggcatggacaccatagagggtggctcgagggtacaagcttgaacaacagccaccttgacttgttttactgggtggttgctgttatcgggctgcttggcttcttgaattacctgtactgggcgaagaagtatgcctaccggcacaatccacgcatggtcaccccatcagctgatcaggactcaccgtgatagatttgattgctcttgaagcaccatttacttcacagatgcaaagcaaaaggtaaccatgtactgatgtaagttgtatcatgctgtttgtgttcagttgattggctggacttggtcgttgatcatttcgactcaaatgtacattttgtaccattccgacccaaatgtgtgtaaaagtggtcgttttctgtggcaaaatatatcattcagagacaactccaatacaactgtatgtctatgaccgtacaaaattttactaatgcccaattatatctcttcctactttcctggt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0491500, RefSeq:Os04g0491500