Os04g0492400

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Revision as of 11:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0492400| Description = Conserved hypothetical protein| Version = NM_001059711.1 GI:115459151 GeneID:4336255| Length = 3764 bp| Definition ...")
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Gene Name

Os04g0492400

Description

Conserved hypothetical protein

Version

NM_001059711.1 GI:115459151 GeneID:4336255

Length

3764 bp

Definition

Oryza sativa Japonica Group Os04g0492400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25009897..25013660

Sequence Coding Region

25011493..25011624,25011790..25011852,25011983..25012049,25012128..25012228,25012391..25012435
,25012545..25013006,25013214..25013384

Expression

GEO Profiles:Os04g0492400

Genome Context

<gbrowseImage1> name=NC_008397:25009897..25013660 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25009897..25013660 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagacgccatcactgcttgttcagtgtttccctggcttgcttcccagcaaggctacgagttgtgtgccaattgtatcagaaagggatctacagctaccatcaccagctgtcgagataatcccatcaaagagtgctcatccttacaaatatgctggcgagaaggttgatgttcaaggtcttgacattttcaaggggaaggtcagtgtagcggatatgatagccttctccccttctgaagtagtcgcatccaaatatgatggatctctgaaatattgggagagttccattactctcgtcaacattattaaaaatgagatccgtgatgggcagttgagcttcaggggcaagcgggttctagagcttggttgtggatctggtctggctgggatttttgcctgtttgaagggtgcatccacagttcattttcaggacacaaatgcagaaacaataagatgcagagcaatacccaatgtgcttgcaaaccttgagcaggctcgggacaggcagaacagaccatcagagagccctgttacaccatcacgacaactgttagccccgaatgtacatttctatgctggggactgggaggagctccctactattctctcagttgtacacccacctgcagcaccaacaaaccttagcttctcagaggacgactttatggatggctgcagtagccatgatgggagcagcatagttggtgtcgacaattgccccaggcgatcaaggaaactttctggtagccgtgcatgggagagggccagtgagacagaccaagctgatggaggctatgatgtaattttgatttctgaggtcccctatgcggtgaactctttgaagaagctctatgcccttatcacaaagtgcctgcgacccccatacggagtactgtatgtggtttcaaagaagaacttggttggttccaatggcggcgcaaggcaactcagagctttgatggaggaggagggtgtccttggtggccactttttaaccgagttagctgaccgggaaatttggaagttcttcttcaagtaa</cdnaseq>

Protein Sequence

<aaseq>MKTPSLLVQCFPGLLPSKATSCVPIVSERDLQLPSPAVEIIPSK SAHPYKYAGEKVDVQGLDIFKGKVSVADMIAFSPSEVVASKYDGSLKYWESSITLVNI IKNEIRDGQLSFRGKRVLELGCGSGLAGIFACLKGASTVHFQDTNAETIRCRAIPNVL ANLEQARDRQNRPSESPVTPSRQLLAPNVHFYAGDWEELPTILSVVHPPAAPTNLSFS EDDFMDGCSSHDGSSIVGVDNCPRRSRKLSGSRAWERASETDQADGGYDVILISEVPY AVNSLKKLYALITKCLRPPYGVLYVVSKKNLVGSNGGARQLRALMEEEGVLGGHFLTE LADREIWKFFFK</aaseq>

Gene Sequence

<dnaseqindica>1597..1728#1894..1956#2087..2153#2232..2332#2495..2539#2649..3110#3318..3488#ggtaattacgccatcccgcgggagaccgattctttactcgcactcccaccgctgctgctgctgcacacggacggggggactctctctggctgccatggcagaagcggcgaagcttccacgggtctccgcctatatatccccacccccaagcccgcgccttgccgacctctactcctcctaggcgtgtggcgggtttgactttctgactttgggagggagatttgtccaagaagaattccgttggaggaggattcggagagctccattggtctgtgggtcggtcggtccagcttgctggagaataagaagggggtgttgttgcgttgcgggcgagggaaggaggggaggagaggaggcgtcttgccgttggggttctgatccctcttggggctcccgtcgaggaggtaatctcggctttctctgcttcggttcgtggtagattcggtttcacggggggagattttttgcagagggacagggtgggggaaaataaaaggaggaagtttttcttgagattttcgtcgggtgctttggtttgattagctgtcgtcagtcgtcgccttgtttagttttacgggttgatctgaaggaaatcgtctggataggttgtggattcaggcggctactgcctcatgagtaagttctcatggcatgtgatgtgtcatgtgtgtcttctagccggaaaagaaattgtagaacagctttttggctttcttcatgttgcatccactgcttcatgtggcatggggagaggcagcgtggagaatccagctctttcatgggggtttagggatcaaagttgtgatttagctgtgtcggtagcctgaatttctggtggatttagttcagatgttgtataactgcagcgtgtggatgggggctggtgaaaaggaggtagctttgctccgtgcgttcttgatttcacacctgcaaatccatgtgtttaggcaatctttttcatcttatttctgccatatttcctactgggaggtgatagaaggcgacagatttgcacaggctaggagtatttttcgggtgttctatggatgtgtggggtttagattctactaagttcgaaaaacaataggagtggctttcttaattgtgtactttttaaaggcacctttatggatttggaagtagcagagtctccatatcctgtccacattcaggcatatagttaacattattgattttacaatagcgaattgtgcttagcaatcttctggttcttagtcacagcttgtgatgttgggttttttactcatcagtatgtatgtaggttattagacttatgttcaaatgatataagttttcttcagaaatcagccatgtacacaagggttagggaatgccagttcccacccagaaccttgtactttattttaaaatacaaaatatgaaaattacaaaagaggaaaattgagtctgttgtagtgactccatttttctcttttgtatattagtttaagatggtgttcatattgaaaatttgtgattctcatgtttggtacagtccaatcatctaattttttcttccttcaatacaaaattaatttcaactgttgttaataactgaagttaacaggtggcacgatgaagacgccatcactgcttgttcagtgtttccctggcttgcttcccagcaaggctacgagttgtgtgccaattgtatcagaaagggatctacagctaccatcaccagctgtcgagataatcccatcaaaggtacatttattttttctgatttggctgtcatttgtatataaaactccaaaagaaatacttcaaatgttttgcagctgtctgttgtactgtcgattggtgttctttttgggattgttttcgtgggtaaacaatttaataagtatgtcttgatcctttttatctcagagtgctcatccttacaaatatgctggcgagaaggttgatgttcaaggtcttgacattttcaaggtaagcagcacatgcatattccttattttgttaattttcaagttggctagtttctttcccttgctaccatcaagttatcaaatataaacatcaaacactaatgttttaatgtgttctccttatgcttcaggggaaggtcagtgtagcggatatgatagccttctccccttctgaagtagtcgcatccaaatatgatggtaagggcataacgaataagcacatcttatattttctttcctccataccatggagtcttattcatcacttcttctcaggatctctgaaatattgggagagttccattactctcgtcaacattattaaaaatgagatccgtgatgggcagttgagcttcaggggcaagcgggttctagaggtaacttcccatgagaaaactggcatcgttggctagctgttacagattcttcatttagttatttagtagatgctttgtgcttgcatttgctttcatcgaatcagaatcaacttgataatttggactcatgcataactcacttccttttgaaaattgatgcagcttggttgtggatctggtctggctgggatttttgcctgtttgaaggtattttcatctttccattgcttctgatgattatcaatttactatatctttgctttcagttatctttacccagaatactgattgactgaatgcttcgatgcttcctcagggtgcatccacagttcattttcaggacacaaatgcagaaacaataagatgcagagcaatacccaatgtgcttgcaaaccttgagcaggctcgggacaggcagaacagaccatcagagagccctgttacaccatcacgacaactgttagccccgaatgtacatttctatgctggggactgggaggagctccctactattctctcagttgtacacccacctgcagcaccaacaaaccttagcttctcagaggacgactttatggatggctgcagtagccatgatgggagcagcatagttggtgtcgacaattgccccaggcgatcaaggaaactttctggtagccgtgcatgggagagggccagtgagacagaccaagctgatggaggctatgatgtaattttgatttctgaggtcccctatgcggtgaactctttgaagaagctctatgcccttatcacaaaggtcagttcctcacttgttatcgctgttttggcttttcatgtatcatgcatctagatcaagctgtgatttgtgatggaataaatgagttgaagcttctaaacctctttctttgagtaggacaatattgctagagtaatttttaattgatgcactcaactataaagatccacaagtgctaatacggcgtcgtttctgctattcttgcagtgcctgcgacccccatacggagtactgtatgtggtttcaaagaagaacttggttggttccaatggcggcgcaaggcaactcagagctttgatggaggaggagggtgtccttggtggccactttttaaccgagttagctgaccgggaaatttggaagttcttcttcaagtaaactagcaaaccaaggagctgggaagatgaaatggggccctggccttgtgacacaattttttgatgtctactctgcagcgctgtacataccgcaaagcgtagttccattaattctttggtaatataggattatgatatgtgtgcctcagttgttgtgcttgctgatgtgttggaaattccacccttttgtagatctcctatgtggtgttgctaagtaaagaaatcaaattgtaatgaaccttctgcataccgaaattatacggtgatggcattagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0492400, RefSeq:Os04g0492400