Os04g0492500

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Revision as of 11:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0492500| Description = RWD domain containing protein| Version = NM_001059712.1 GI:115459153 GeneID:4336256| Length = 4539 bp| Definition =...")
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Gene Name

Os04g0492500

Description

RWD domain containing protein

Version

NM_001059712.1 GI:115459153 GeneID:4336256

Length

4539 bp

Definition

Oryza sativa Japonica Group Os04g0492500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25014101..25018639

Sequence Coding Region

25014311..25014432,25015329..25015400,25015491..25015550,25015652..25015757,25016447..25016551
,25017472..25017939,25018535..25018639

Expression

GEO Profiles:Os04g0492500

Genome Context

<gbrowseImage1> name=NC_008397:25014101..25018639 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25014101..25018639 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcacagcgcgaggaagaagaagaagaagaagggcgggggcgggcggaaggcggccaaggaccacggggggcagctcgagggcgaccaggccgccctcgccgacgagctcacggcactgggttcaattttccttgaggacttcaaagtgacatcagaatcacctcagacccgttttactatatgtatcaggccttattctgatggcatgggctttggagattcgaatgtttcagcgactcttgatgtaacgtgttttgctggttacccccacaagtgcccaaagttgcgggttctacctgaaaagaccttatctagagaagatgctaatcggttgctttcccttcttgttgatcaggcaaacatttattcccgagaagggcgtgttatgatattcaatttggtagaggctgcccaagagttcttgtcagaaattgctccagctaatgattcaacaagcatggctccttggttgggttcaggcaaagtacagcaaacaactgatgtagacgtgaaagttaagcttgacaatggttcttaccatggagttgcttacatgcataactcatttgacctgtatagtcaattatatgatggaggtagttggagcatgcaaggtccagatccagcaactgatagtgctgggaaaattgttggttctcaagtcaaatctaatcttaaaagcaagaggaagacaattattgaaaaatcccgtgtttcttctgatgaggttaatgttgcaaagggtttattaccggataatgctggtcagaaaaatataatgaagcatgatgttattcgggagacagttcccagtttgcatgtcgttgcagaggaaactgaaaatgacagcaaaactgtttctacgagcaacagagaaaatacatcaggtactccagagaggagttttagcagtgtgcatcaacttgaggactctgatctttcagacgaagattggaatgatgaagattctggttcaggctctggattttcaaataccccatcttttgacatgtttgatgatgcttcacggaat</cdnaseq>

Protein Sequence

<aaseq>MGHSARKKKKKKGGGGRKAAKDHGGQLEGDQAALADELTALGSI FLEDFKVTSESPQTRFTICIRPYSDGMGFGDSNVSATLDVTCFAGYPHKCPKLRVLPE KTLSREDANRLLSLLVDQANIYSREGRVMIFNLVEAAQEFLSEIAPANDSTSMAPWLG SGKVQQTTDVDVKVKLDNGSYHGVAYMHNSFDLYSQLYDGGSWSMQGPDPATDSAGKI VGSQVKSNLKSKRKTIIEKSRVSSDEVNVAKGLLPDNAGQKNIMKHDVIRETVPSLHV VAEETENDSKTVSTSNRENTSGTPERSFSSVHQLEDSDLSDEDWNDEDSGSGSGFSNT PSFDMFDDASRN</aaseq>

Gene Sequence

<dnaseqindica>211..332#1229..1300#1391..1450#1552..1657#2347..2451#3372..3839#4435..4539#actgactcgactcgagcacaatctaatctgggcttcgagttgacgcgcacgcgctctcccctcgctccccctcccacgccaaaacctccctcctcctccccctcgccgcggcgccaacgcagatcgcctcccaatccctatccgatcgagaccgcctcccctttccggctagttcgccgccgccgccgacgacgacgattgcgattggcgatggggcacagcgcgaggaagaagaagaagaagaagggcgggggcgggcggaaggcggccaaggaccacggggggcagctcgagggcgaccaggccgccctcgccgacgagctcacggcactgtaagcgtgtcccctcctcccccccaccccatttttggtcgtagtacgcttatcctcctcgcgtggtaatcggttgatggcgcgtggttggtttcgagtttgagcttctgcatgtttgtgaatcggttcatcgctgatggagtgatggttggtgcttgctggtttgctgcctggcagtgtgcgatgcgcgtgcttcgagttgattcgcggcattgccggtttagttagtcggcctggaatttcgaattgcgaggtggcatgtgtgtgatgtctcctatgctggtacgagattcaggtgggggtgtggttcatcatatcgttcgcctggatttccccaacttatactgaatgccgcattttgaatttcgaggtggtgttgcatagactgtaccgaagttctcgagttttttccccctgccttgggaggtacggaatagtccattagttcacataccttagtacagtatgatgccctgactcattcattactctgatgcttgctcacatgattttagcattcttcattttgaggattgcagtttgctttcatatcattttgctgattgtaggttggttgtgccgtttggatatttttcctgtccaatttctgagcagcgtagcatgtgggtacctaacctgataccactagctagtgcagttcgcctttgcttatttttagcagtatgcagtagcaagcattacttcctttgttttgagttttgaattggagtttcactgttctgaataacttattcattaacaatttagtagtcaagtactgattgtttcgctttgcaaaatgaaaaataaaagcactacaattttgtttagtgatgccccttttcttctgttagtgattgcatggtttaaccgacatccttttgcatatcaattaggggttcaattttccttgaggacttcaaagtgacatcagaatcacctcagacccgttttactatatgtatcaggtactttctcgtgtttcttgaacatactcttaagtgtatcacctgcatcatggcaaataaagtttttaaaacttatgagtatgtaaacaggccttattctgatggcatgggctttggagattcgaatgtttcagcgactcttgatgtaacgtatggctttaattttaaggagctatgacttatcctgttatgcatacaacatatatctttgttgtttcgctagttgacatctagcttgcatttacaaataggtgttttgctggttacccccacaagtgcccaaagttgcgggttctacctgaaaagaccttatctagagaagatgctaatcggttgctttcccttcttgttgatcaggtatattttccttcttctgatattttccttcactgaagaagtcgtttagccctaaaacttgaacctgagtgagtggggaggttatcctccctaacaccaggccttggtgttattacctattgcttctgattgaatttgttgaagagaatgtttaattgaagcctttgctcttgtggtcatattgtatttggcatgcctgtagacatcattttcatcgaaccgtgttagactattagtcttgcatcctttttcttttcagtgctcggttttgaactgcaaagaaaattttaccccttatgggcaagcattataaatgatagaatagtataacctctttgttgtagataaatgaaagttttccgatcaccacactccatattcattaaaattcctcattactttatcctaatttgttttagatgattctttatctatccctgtcaaattcacccgatcccttatttgcgcatgatgtctcaatgacatgtggaccctgcagaagcaagggaaaaataaggaaatgggttaactttcagggaaaaacagggttttcaatcatgttttgtctagagaatctctataaattgttttgttttttacattctactgtgaataaataactttcccaagcatgttttggtgtgaatgggttaaataactttaacagactttttggtgtttgttactaggcaaacatttattcccgagaagggcgtgttatgatattcaatttggtagaggctgcccaagagttcttgtcagaaattgctccagctaatgattcaacaagcatggtaagtcagtcttttcatggttactcaggccctctttgtttaagcttggacttttaagccagcgttttggcttatatgttttataagccggtggctttaaacccttaggtttattggtggagttatacctccacttcacataagccaaaaaagctactccaacctagcttttggctttggcttaacagtgtaagagtggcttatggcttttaaaaaggccagacgaaaaagctacttatttgttcaggcttagactttttggctcataaactgtcttataagcctaaacaaagaggggttgataacatgagcgttttctctctcttttggttatgtacagtgaaactagaggcatgttcttttgctgattcaacctgcactgattgatctagtacagtttcttaacttgataaacttttacttttggttaccccacatgttgcttgtcagttggcacatcatgcttttatcgaatatattgtgaactatgaagaactttgttgtaatgatgtgtctcactttcacagtgtttacgtcttggtctcctgcatttgcttagctgtattaattaaggtacttggttgctacagatgtgatatgtagcttctaatatgtcatctcagcaccatttctactttcaatggctgggccttggattttgtgtcctttctttccagttgtgattcttaatattcacgttcagaagaacacacttcctaatgtgtgcaatcgcatactatgtacagatgtagcatttcatgagatgtcgagtatgcatcagatcatttatccttttcttttgtcagtcagatcatttatccttttcttttgtcagtccacaaattttatgttgtatttctcccaagctatatatagtactgctgaatatagctgatgttatttgttatcatatcttgtaggctccttggttgggttcaggcaaagtacagcaaacaactgatgtagacgtgaaagttaagcttgacaatggttcttaccatggagttgcttacatgcataactcatttgacctgtatagtcaattatatgatggaggtagttggagcatgcaaggtccagatccagcaactgatagtgctgggaaaattgttggttctcaagtcaaatctaatcttaaaagcaagaggaagacaattattgaaaaatcccgtgtttcttctgatgaggttaatgttgcaaagggtttattaccggataatgctggtcagaaaaatataatgaagcatgatgttattcgggagacagttcccagtttgcatgtcgttgcagaggaaactgaaaatgacagcaaaactgtttctacgagcaacagagaaaatacatcaggtactccagagaggagttttagcagtgtgcatcaacttgaggtaatgaacacacttgtatattttctcagtgttatactaatttttgatgcagcatggcattgcctaaatatacaaaatgtgttaatctaatgttgtccaatggatagtgtaattcaagggatactgttatgtaaagtcaaaatgtataatatcgcgttaacctaaggttgttcacgggctagtcatcactagtgtaatggagggattgtgttatgtaaactgaaaatctctagtattatgaactcatctgatagtcttatagcaagtgtttattatctgagcctttatcaacttctgagggcttgtttgatattatactatgttcgctagttttgttaggtggcttatatgatgtttttttttccaacgtgaacttttggttaaaatcctgatgttcatttgttcctacttttcttttgaagtgggtcatgtgatcattgtttggtacttctgtagtttgttcctgcttttgttttcaaactgttctcctgcttacctttgagtttgagtagttgcatctacataagacttaagtaaaatagatagataactcatagcatgccttatctggctgcatatttgtgaatatgggtaggactctgatctttcagacgaagattggaatgatgaagattctggttcaggctctggattttcaaataccccatcttttgacatgtttgatgatgcttcacggaat</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0492500, RefSeq:Os04g0492500