Os04g0497000

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Revision as of 11:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0497000| Description = Similar to Allyl alcohol dehydrogenase| Version = NM_001059738.1 GI:115459205 GeneID:4336283| Length = 1560 bp| Def...")
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Gene Name

Os04g0497000

Description

Similar to Allyl alcohol dehydrogenase

Version

NM_001059738.1 GI:115459205 GeneID:4336283

Length

1560 bp

Definition

Oryza sativa Japonica Group Os04g0497000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25256645..25258204

Sequence Coding Region

25256842..25257470,25257556..25257736,25257869..25258096

Expression

GEO Profiles:Os04g0497000

Genome Context

<gbrowseImage1> name=NC_008397:25256645..25258204 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25256645..25258204 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcgacgaacaagaagatcgtgctgaggaaccacgtgacggggttccccaaggagtccgacatggagctcgtcgccgcgacgggcgccgcgccgtccagggtgcccgagggcacggacggcgccgtcctcgtgaagaacctgtacctgtcctgcgacccctacatgcgcggccgcatgtccagccatgacggctcttacgtcgacgctttcgtcgtcggcgaggctatcaccggctatggcgtcgggaaggtggtggactcgagccacccggggttcaaagccggcgacctcgtgtggggaatgacgggatgggaggagtacagcctcatcaaggatcccagcagggccctcttcgccatccgccatcccgacctgccgctctcctactacaccggcctcctcggcatggcgggcttcacggcgtacgtcgggttccacgagatatgcgcgccaagggaaggcgagagggtgtacgtctccgccgcgtcgggcgccgtggggcagctggtgggacagttcgccaagctcatgggctgctacgtcgtcgggagcgccggctccgacgacaaggtgaggctgctcagggagaagttcggcttcgacgacgccttcaactacaagaaggagagtgacctgagcgcggccctgaagcggtgcttcccggaagggatcgacatctacttcgaaaacgtgggcggcgcgatgctggacgccgtgctgctcaacatgcgggtgcgcggccgcgtcgcggcctgcgggatgatctcgcagtacaacctggagcaccccgaccccgtccacaacctgacggccatcgtcacgaagcggctccggatcgaagggttcatcgtgtccgaccactacgccaggtacagggagtacgaggagaaggccgcgcggtatgtgaaggaggggaagatcgcgtacgtggaggacgtcgccgaagggctggagaacgcgccggccgcgctcatcgggctcttctccggccgcaacgtcggcaagcaggtggtcgtcgtcgccagggagtaa</cdnaseq>

Protein Sequence

<aaseq>MAATNKKIVLRNHVTGFPKESDMELVAATGAAPSRVPEGTDGAV LVKNLYLSCDPYMRGRMSSHDGSYVDAFVVGEAITGYGVGKVVDSSHPGFKAGDLVWG MTGWEEYSLIKDPSRALFAIRHPDLPLSYYTGLLGMAGFTAYVGFHEICAPREGERVY VSAASGAVGQLVGQFAKLMGCYVVGSAGSDDKVRLLREKFGFDDAFNYKKESDLSAAL KRCFPEGIDIYFENVGGAMLDAVLLNMRVRGRVAACGMISQYNLEHPDPVHNLTAIVT KRLRIEGFIVSDHYARYREYEEKAARYVKEGKIAYVEDVAEGLENAPAALIGLFSGRN VGKQVVVVARE</aaseq>

Gene Sequence

<dnaseqindica>735..1363#469..649#109..336#acccaatcctcacatcgcagagcaatctcgaagagcaaacgacccgcaccaccggccacagacggagagttcgagagcagggaaatctgaaatttggagagaccaaagatggcagcgacgaacaagaagatcgtgctgaggaaccacgtgacggggttccccaaggagtccgacatggagctcgtcgccgcgacgggcgccgcgccgtccagggtgcccgagggcacggacggcgccgtcctcgtgaagaacctgtacctgtcctgcgacccctacatgcgcggccgcatgtccagccatgacggctcttacgtcgacgctttcgtcgtcggcgaggtatgctgctctctgaattttgatcttcagtttgatttaactctgtaattaaacgcgtacttttttcatggggaaaagtttgttaatttcttgttctgatgatgctcgtgatgtgtactgtggtgtggacaggctatcaccggctatggcgtcgggaaggtggtggactcgagccacccggggttcaaagccggcgacctcgtgtggggaatgacgggatgggaggagtacagcctcatcaaggatcccagcagggccctcttcgccatccgccatcccgacctgccgctctcctactacaccggcctcctcggtacgaattgaaccatgcatgccgcgattgattagcagatcagcatccatggccgacgattaattaatttcataatctgtttcaggcatggcgggcttcacggcgtacgtcgggttccacgagatatgcgcgccaagggaaggcgagagggtgtacgtctccgccgcgtcgggcgccgtggggcagctggtgggacagttcgccaagctcatgggctgctacgtcgtcgggagcgccggctccgacgacaaggtgaggctgctcagggagaagttcggcttcgacgacgccttcaactacaagaaggagagtgacctgagcgcggccctgaagcggtgcttcccggaagggatcgacatctacttcgaaaacgtgggcggcgcgatgctggacgccgtgctgctcaacatgcgggtgcgcggccgcgtcgcggcctgcgggatgatctcgcagtacaacctggagcaccccgaccccgtccacaacctgacggccatcgtcacgaagcggctccggatcgaagggttcatcgtgtccgaccactacgccaggtacagggagtacgaggagaaggccgcgcggtatgtgaaggaggggaagatcgcgtacgtggaggacgtcgccgaagggctggagaacgcgccggccgcgctcatcgggctcttctccggccgcaacgtcggcaagcaggtggtcgtcgtcgccagggagtaaccgcgagatgtgtagttaaacgtgtagcggtatggttacacttcactagtgctgtgcattgtcctgatggctgatgctgtgtttagatgtgtcaagcttagctgaatgcgttggattttgtatcttgaacatcaataacggtgtattttaacaagtgtttagttgttttgaatacacagtaagacaagattaaagtg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0497000, RefSeq:Os04g0497000