Os04g0497400

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Revision as of 11:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0497400| Description = Similar to 6,7-dimethyl-8-ribityllumazine synthase (Fragment)| Version = NM_001059741.1 GI:115459211 GeneID:4336286| ...")
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Gene Name

Os04g0497400

Description

Similar to 6,7-dimethyl-8-ribityllumazine synthase (Fragment)

Version

NM_001059741.1 GI:115459211 GeneID:4336286

Length

3544 bp

Definition

Oryza sativa Japonica Group Os04g0497400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25276691..25280234

Sequence Coding Region

25276998..25277036,25277111..25277170,25277620..25277666,25277796..25277874,25278493..25278588
,25279319..25279414,25279810..25279937,25280042..25280162

Expression

GEO Profiles:Os04g0497400

Genome Context

<gbrowseImage1> name=NC_008397:25276691..25280234 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25276691..25280234 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggctgcccccgcgacgacgtcatccgcggccgcgaggccctcctcctcctcctcctcctcgcggcaatccgacgctcctctgcgcgccgccaccgtctccttcccttactccccacggccggccgcgttggctgcaggcgctcgggcctcgcgggttagccccgtcgtggtcgccgccggcggcgggcaccagcggcttatggggtcgttgactaacacccaggggctcaggtttggagtggttgtggcacggttcaatgagattgtcaccaacttgctactgcagggagctcttgagacatttgagagatattccgtcaaaaaagaaaatataacagttgtaagtgttcctggcagttttgaaattcctgttgcggcacaaaagcttgggaagtctggaaagtttgatgcaattttgtgcattggcgctgtgattagaggtgacacaacccactacgatgctgttgcaaactctgctgcttcaggtgtactgtctgctggattgtctgctgagatcccatgcatatttggtgttctgacatgtgatgacatggaccaggctctaaatcgtgctggtggtaaggctggaaacaagggagctgaagccgctctaactgcaatcgagatggcctcgctgttccagcatcacctggcctga</cdnaseq>

Protein Sequence

<aaseq>MAAAAPATTSSAAARPSSSSSSSRQSDAPLRAATVSFPYSPRPA ALAAGARASRVSPVVVAAGGGHQRLMGSLTNTQGLRFGVVVARFNEIVTNLLLQGALE TFERYSVKKENITVVSVPGSFEIPVAAQKLGKSGKFDAILCIGAVIRGDTTHYDAVAN SAASGVLSAGLSAEIPCIFGVLTCDDMDQALNRAGGKAGNKGAEAALTAIEMASLFQH HLA</aaseq>

Gene Sequence

<dnaseqindica>3199..3237#3065..3124#2569..2615#2361..2439#1647..1742#821..916#298..425#73..193#gatcttccccccgacttcccgggccgtctcctcccctgcaccaccccaccccaccccaccccaccggcggcgatggcggcggctgcccccgcgacgacgtcatccgcggccgcgaggccctcctcctcctcctcctcctcgcggcaatccgacgctcctctgcgcgccgccaccgtctccttcccttactcccgtacgcgcccgccggacaaccaaattttctctccatctgagtcttttcttactcgtcctgatttcatttttcctcttctctgtaatttgtctacttacgtgcagcacggccggccgcgttggctgcaggcgctcgggcctcgcgggttagccccgtcgtggtcgccgccggcggcgggcaccagcggcttatggggtcgttgactaacacccaggggctcaggtttggagtggtgagttagtgtgtcctccacttctcccattgttgacttgtgtatgactgtagattgggctaactttgagttgacgcggctctacatggacatgcgagatagcttcctgcccaatttcttactgattcgtgaagtttgattgtgtgttttctgtgcttcacatgagacattgctcctggccaatttctagctgattactagtaaagcttccttccccagaggaactatttgattcgtttgctttattgataatgctgaaaacacctggttgtttggtctaaaaaatgttgctttactgaaacgccattgtttactgaaaaatctcgacaccttttctcctcaactgcctaacgttgttgttgttgttattgttgttgttgttttttgtcctacaggttgtggcacggttcaatgagattgtcaccaacttgctactgcagggagctcttgagacatttgagagatattccgtcaaaaaagaaaatataacagtatgcatctttcttgttctgagtgaatttctgtttcaaaaagattggagtaatcctgtgccatcaaaatgtcatatcattgttcgagcatttttcttaactagtcttgaacatcattcatatcaccactattgtaaccgttatttttttagataatgaccactattgtaaccgttatgcatgcatacaaaattgttttgttacccttgttcccgatgttaaggtaaaaaatacttttgtcatgaagtattgaccatgcatagcactcttgttggatgacttacctactttgtagggttaatatatgtttcatgcccatccacctgttcctttcttatttcattgttcagaaatactgttctgaagtaaaaaatgtaatgcagtttctctaggcccattaactattttccttttgttccatgcttgacaatgtatgaactacatattatcagcatgtttcatggatttgtaattgtgaataacctttcgatgtatgagatgaacttcacacatgtagcattcataagtagaggttaactaatgttagcatggtacgcacttaagctgtgtacaacctttgttgcatatcagacatataaagtgatccacaaaacatatgaattcagacttcatccatgattggtaaacagccttagtttgtttaagtttctaaatagtttcagaaacttttggtgcacattgcctcactctaattcaaatgattgtttaggttgtaagtgttcctggcagttttgaaattcctgttgcggcacaaaagcttgggaagtctggaaagtttgatgcaattttgtgcattggcgctgtggtaagttgtttgcctttttgttcatattaccatatatcatggctccaagattgtgtctaggttattttccagacacatcataattatctgattcagatactatatagcctggtgcagtgtgccaaataatgagttctgaaatgtttatgtaactcatattttacagggtgtcttttaaacaatgccaatcatatgtctaatttacactggacaaaattcaactaggagctttatcataactaacataagggcctgtttggcacagctccagctctagctccacccctcctggagctggagctcagccaaacagttccagctccaccaaaaatgggagtggagcttggtggagctctctcacaaaatgaactagagttgtggagctgggtttaggtagctccacaactccactccagacccaactcctaaagctaaatttaggagttggagctttaccaaacaggcccgtctagctaacaatactaagtcacaaagtattttcccttaatcccaccgctcttggcatgataatacctttatatctattttttgcaagcccttagttatcagtagttggtgcgatttgattacagaagtcttccttatgctaatttgcagattagaggtgacacaacccactacgatgctgttgcaaactctgctgcttcaggtgtactgtctgctggattgtctgctggtacgttgctttcacctctttgggtgtagtgcctgtaggaacctaattctgtaagtttttgttttcagctggggtaactctcagtggaacttatggcagattatttattatttttttattgttgcacagagatcccatgcatatttggtgttctgacatgtgatgacatggaccaggtaattcatcattcattaacatgtatcttaccaaagtttctattattccatatccaatttataactcgtcgtttgtcaagtagttattctgtacttttgaaccatagtaatttgagaagcaatggattttgaaagtttcttactcgaaatgtagctgtcatgttcccaacccttatgtttaactctaatggaagatgcaccaccactttggcgtgctgtcatgtgacattgttggtgtgaatattttagtaaaatgaacctgaatcaactcgacatgggtggactaatgatacaagacaatcatacatgctttctgataaaattgccatgcgtactgtacagatctttccttgattgtccaaccacccttgagaagtcacggactatttatctacttattaactaattccctctactaataaaatacatgccacatcaaacctttacaggctctaaatcgtgctggtggtaaggctggaaacaagggagctgaagccgctctaactgcagtgagtaccatttcttgacaagtcagatagaaacctggattcattttcatctcaacaaactatctttcctgtagatcgagatggcctcgctgttccagcatcacctggcctgaccgccggggctactgatatcatcgggacggcaaagttttggctgctagagattttcgccgtttgctatagcatcttgaggccattattatccattgtccccaactggttgatcgggatgatggttgtgtttttaccgctgttctttttgtcgagtttttttgcaagactgaagaggtatcaccgtccagctaagctgttcaactgctgtatgtgagaaacatgagaccttgaattgaataaacgtcagtacgtcaccaagtactttgattcgtccatgaataaaaagcaggatttctgcacttgtgg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0497400, RefSeq:Os04g0497400