Os04g0498700

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Revision as of 11:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0498700| Description = Haem peroxidase family protein| Version = NM_001059749.1 GI:115459227 GeneID:4336295| Length = 4105 bp| Definition ...")
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Gene Name

Os04g0498700

Description

Haem peroxidase family protein

Version

NM_001059749.1 GI:115459227 GeneID:4336295

Length

4105 bp

Definition

Oryza sativa Japonica Group Os04g0498700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25319096..25323200

Sequence Coding Region

25319232..25319656,25319771..25319936,25321086..25321265,25322088..25322843

Expression

GEO Profiles:Os04g0498700

Genome Context

<gbrowseImage1> name=NC_008397:25319096..25323200 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25319096..25323200 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcagatgaggcggcagcggcggcgggagtgcattggtgttctttgctcggcgctgtttttctctgtcctggcagtggccgtcgccgcaggctccggctcgtcgtcgcagccgccgtcttcgtctccggcgccagctgctagctcagcaacgccggctgcgagggcgccttctcaacggacgccgccgacgccagcaacgccggcaaaggcggcatccccaccggcgacgaactcgtcgtcctctccacggacacccgcggcgccagccccgaggcctccacagccgccaccggcgacgtcgccggcgccaacaaagccgtcgtctccacccgcgccgaagccaccttcccctcctgcgccgtcgccgtccacaacgccgtcgtctccacccgcgccgaagccatcttctcctcctcctgcggcgacgccgaccacaaagccgtctcctccaccgtcctcgccaccggctccgagaccgtctcctcctcttcctcctcggacgccaccgccaccgccgccggcagcggcaccgaaaccatctccttctcctcctccggctccaacgaattccacgacgaactcctcctcgccgtcgacgtccacgccggtccagctctcgccaaatttctacgcgcagtcctgcccgagcgtggagctggcggtgagggatgtcgtcaggtcggcctccacattggattccaccatccccggcaagcttctcaggatgctcttccatgactgctttgttgagggatgtgatgcatcagtgatgattgaaggtagcggcacggagaggaccgatcctgcaaacctctcacttggtgggttcaatgtcatagatgctgccaagaggctgcttgaagccgtgtgccctgtaactgtttcctgcagcgacattttagtccttgccgcaagagatgctgttacatttaccggaggaccgttggtgccagtctctctcgggaggctcgacggcctggtctcgctggcctccaacgtcagggcgaacatcatcgacaccggcttctccgtcgacgccatggcgaggagcttctccgccaaagggctcaccctggacgacctcgtcaccctctcaggggggcacaccatcgggtcggcgcactgcacgacgttcggggagcggttccgggtggacgcgaacgggagcacggtgcccgcggacgcggcgatgaacgcggactacgccggggggctgatcagggcgtgctcggcggtgaacaacacggtgtcgtcgacggcggcggtggactgcgacgaggggtcggcgtcgcggttcgacaacgcctacttcgccaacctgctcgccgggcgcgggctgctgcgcacggacgccgtgctggtgcagaacgccacgacgcgggccacggtggaggcgttcgcgcggagcgaggggagcttcttcgccagctgggcggcctcgttcgccaggctcaccagcctcggcgtcaggaccggcgccgacggcgaggtccgccggacgtgctcccgcgtcaacggctga</cdnaseq>

Protein Sequence

<aaseq>MDQMRRQRRRECIGVLCSALFFSVLAVAVAAGSGSSSQPPSSSP APAASSATPAARAPSQRTPPTPATPAKAASPPATNSSSSPRTPAAPAPRPPQPPPATS PAPTKPSSPPAPKPPSPPAPSPSTTPSSPPAPKPSSPPPAATPTTKPSPPPSSPPAPR PSPPLPPRTPPPPPPAAAPKPSPSPPPAPTNSTTNSSSPSTSTPVQLSPNFYAQSCPS VELAVRDVVRSASTLDSTIPGKLLRMLFHDCFVEGCDASVMIEGSGTERTDPANLSLG GFNVIDAAKRLLEAVCPVTVSCSDILVLAARDAVTFTGGPLVPVSLGRLDGLVSLASN VRANIIDTGFSVDAMARSFSAKGLTLDDLVTLSGGHTIGSAHCTTFGERFRVDANGST VPADAAMNADYAGGLIRACSAVNNTVSSTAAVDCDEGSASRFDNAYFANLLAGRGLLR TDAVLVQNATTRATVEAFARSEGSFFASWAASFARLTSLGVRTGADGEVRRTCSRVNG </aaseq>

Gene Sequence

<dnaseqindica>3545..3969#3265..3430#1936..2115#358..1113#atgctcgtacatgagtccgtctagtgtagcgcggcgtcggttgtgcgtcccccgatttataatggatcgcatcggcgcattcgctatagtggttgctgctgccggtgcgtccaccgtcgttaatgccggcgcgcgagagatacatgtacgcgactagtagattctctacgccaactcgatcgatcgctctctgcgtccaccaccgaaactatttctgcatgttcatcagctgctagctgttcttgcacatagtggtggtggtgtagtggtgtgtgagactgtgagtgattgtgcgctcgtgagcgagctcagctgggctggctagctcatgagcatcccgttctcctcggctgcaagatggatcagatgaggcggcagcggcggcgggagtgcattggtgttctttgctcggcgctgtttttctctgtcctggcagtggccgtcgccgcaggctccggctcgtcgtcgcagccgccgtcttcgtctccggcgccagctgctagctcagcaacgccggctgcgagggcgccttctcaacggacgccgccgacgccagcaacgccggcaaaggcggcatccccaccggcgacgaactcgtcgtcctctccacggacacccgcggcgccagccccgaggcctccacagccgccaccggcgacgtcgccggcgccaacaaagccgtcgtctccacccgcgccgaagccaccttcccctcctgcgccgtcgccgtccacaacgccgtcgtctccacccgcgccgaagccatcttctcctcctcctgcggcgacgccgaccacaaagccgtctcctccaccgtcctcgccaccggctccgagaccgtctcctcctcttcctcctcggacgccaccgccaccgccgccggcagcggcaccgaaaccatctccttctcctcctccggctccaacgaattccacgacgaactcctcctcgccgtcgacgtccacgccggtccagctctcgccaaatttctacgcgcagtcctgcccgagcgtggagctggcggtgagggatgtcgtcaggtcggcctccacattggattccaccatccccggcaagcttctcaggatgctcttccatgactgctttgttgaggtaagaaactactgatgccatgactgtttatctcagaatctagtagtatactgcttgcatttgtcaaatgcgtcacattggctgcaatttgcaacaatggaagttcttgtgcatgcaagcaaatggtgaaatggctgtctgcaatgtagatggttatatgaatcacatccaagtgtgtagatctagccatcaacaattcctgttccatcacactggattggggtattgccatttgccgtctcagtttttcatattctcagaaataacaatggtggggtggaaatataatgcagtaatgtgtttttgttcaattttatgatgatatatagttccttcggcccaatttactagcagctgaataatagttattttcatccgttttcttagtttgaaatgctgaagacctgaagaactaatcaaatgctcattctactagttagtttaggatattccttttctcaccctagttttccccagaatagttatgacatgtgtggcactaattgcatcggctaataatctggcattattcgaatataatgtatatcttgtcgattgaatggtccagtctagaatagttattgatcactaagctatgtggtggctaaaattaagaccctaatccattatgcacgcttggtataaccaaacataatgtagttttccacagcttgcacattgtcactgccacaattatgggaacaattgtatttgtcttgcatttgcatctcatcgggtttaagaattgtgaaaacatccacgcttgcacaataacagaaagtgagaaagtcattcttagagtacattttttcttggtctcagggatgtgatgcatcagtgatgattgaaggtagcggcacggagaggaccgatcctgcaaacctctcacttggtgggttcaatgtcatagatgctgccaagaggctgcttgaagccgtgtgccctgtaactgtttcctgcagcgacattttagtccttgccgcaagagatgctgttacatttgtaagtatgatggcactatgtgatttctcttttctagttgctacaatccactcaaaggtaaatgtgccaaatatttaaattgttgcctgagatgaattttcctagaaatgttgctactaaatatagttaagcagatgtagtactcttcataagcataggacatcagaaataatccacattaatgctgcaacagttagatctttaatcatccaatgaattgagtgctcctggtccatgcatacgttacacgactataccttggaaaataattagaactactatggttacacccaaataaaatcagacaggtagaccatcatgaacttaactaagtgaacacaattccgtttccattagtttcatgattgtcatcttatgtcgttggaccacaatattttatgtgcgtaattctgtgggggacatgattaatggtcctaaggggattgatgaaatgagctaatgaaggggggcacaactggaatagtttttcattgtttagtagcttcttctttcctctctctttctctctttcactgttttggtgatcttgtaaatactttttttctcccctgcttaatataacaccagctttgctggcttcggtttttttataaaaaaaacaactggaatagtgaaacttaagaacagatatgctttgaaactacattcctctgtatctagaaatacagagtttgcagtaacattcacactcacattcaccttcaccatttcacccacatcatatagatgttgattcggcatagacttggtaacaaaaaagaaatacagcaagacttataatatggttgtttctacggaaatgtttctctaaacttcaacaccctcgttttccattagcatatgcttcccaaactgctaaaccgtgttttttttttgcaaaaactttttatataaaagtttctttaaaaattcaaatgaaccctttttcaattttatattaattaataattaattaatcttgtgttaattgcttgctccggtttctgtgccacttaaaagctcaatttttagtcttggcacaaaatcctattggcatgttagggcagattggtttacaaagcagataaactaccaatgtaaaatgagtgacattcatgaactaacatgcattcacctgctgcaaaccagaccggaggaccgttggtgccagtctctctcgggaggctcgacggcctggtctcgctggcctccaacgtcagggcgaacatcatcgacaccggcttctccgtcgacgccatggcgaggagcttctccgccaaagggctcaccctggacgacctcgtcaccctctcaggtacacacacacacgctcttgaatgctggaggatcaactgcgattttcacttttcacctggtctcaccgtgagcacacggctgtcgatcgccggcgtggcgcactggcgcgcaggggggcacaccatcgggtcggcgcactgcacgacgttcggggagcggttccgggtggacgcgaacgggagcacggtgcccgcggacgcggcgatgaacgcggactacgccggggggctgatcagggcgtgctcggcggtgaacaacacggtgtcgtcgacggcggcggtggactgcgacgaggggtcggcgtcgcggttcgacaacgcctacttcgccaacctgctcgccgggcgcgggctgctgcgcacggacgccgtgctggtgcagaacgccacgacgcgggccacggtggaggcgttcgcgcggagcgaggggagcttcttcgccagctgggcggcctcgttcgccaggctcaccagcctcggcgtcaggaccggcgccgacggcgaggtccgccggacgtgctcccgcgtcaacggctgatgatgcgtgcacgcacgatcgatacatacatgcatagaagggatcgacacaatgtatgttgagaatgatcgatattcgatttgttcgttgttgttgatgatgatctgtttgtagtagcagcttggttttttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0498700, RefSeq:Os04g0498700