Os04g0500400

From RiceWiki
Revision as of 11:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0500400| Description = Similar to Hydroxyproline-rich glycoprotein DZ-HRGP precursor| Version = NM_001187073.1 GI:297723276 GeneID:9268117| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0500400

Description

Similar to Hydroxyproline-rich glycoprotein DZ-HRGP precursor

Version

NM_001187073.1 GI:297723276 GeneID:9268117

Length

709 bp

Definition

Oryza sativa Japonica Group Os04g0500400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25374542..25375250

Sequence Coding Region

25374542..25374665,25374787..25374864,25375000..25375250

Expression

GEO Profiles:Os04g0500400

Genome Context

<gbrowseImage1> name=NC_008397:25374542..25375250 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25374542..25375250 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttcttccaccatccttttctactgcgtcgctctgtccgtggtcgccgccgccgccgtcgtgtcgtccgccgccgaggaggccgaggggccccaagacgaagcaggccgcttcctatcagcggccaccctggcgtcctccgattccgacgcaaagacgtcgcgcagggcgctgaccagccaagaggagataatcgcaaagccgtgcccggtggagttcgagcaggtgaaggggttcggagaacttggggccaagtgcaacgacaagcagacgatgaaggagtgctgcgagctgttcaagaagatcgcgtgcccctacaaccatctgctcaacgacatcaccaacgtctgcgcgaacgaattcttctacctcatccacaccaagggcaagctgcagcccggaaccatcttggagaactgcaacgagggccctatggggatcaactgctga</cdnaseq>

Protein Sequence

<aaseq>MGSSTILFYCVALSVVAAAAVVSSAAEEAEGPQDEAGRFLSAAT LASSDSDAKTSRRALTSQEEIIAKPCPVEFEQVKGFGELGAKCNDKQTMKECCELFKK IACPYNHLLNDITNVCANEFFYLIHTKGKLQPGTILENCNEGPMGINC</aaseq>

Gene Sequence

<dnaseqindica>1..124#246..323#459..709#atgggttcttccaccatccttttctactgcgtcgctctgtccgtggtcgccgccgccgccgtcgtgtcgtccgccgccgaggaggccgaggggccccaagacgaagcaggccgcttcctatcaggtactatagcacatatgagtcctgaaacgttaatttcctagcttttgcaacgtaaaaaatggctagctagctaactccaattatatttttgccatcgtcttttggtatacgatcctcttagcggccaccctggcgtcctccgattccgacgcaaagacgtcgcgcagggcgctgaccagccaagaggagataatcgcaagtaataacacgcacgcataagtgtttgttgtatacgtactgtgtgccggcgatgatatgatcgtcgtacgtcgtctcgatctgacacgcacgcacgcacggtgctgcggcgtggcgtacgtttgtacgtgtgcagagccgtgcccggtggagttcgagcaggtgaaggggttcggagaacttggggccaagtgcaacgacaagcagacgatgaaggagtgctgcgagctgttcaagaagatcgcgtgcccctacaaccatctgctcaacgacatcaccaacgtctgcgcgaacgaattcttctacctcatccacaccaagggcaagctgcagcccggaaccatcttggagaactgcaacgagggccctatggggatcaactgctga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0500400, RefSeq:Os04g0500400