Os04g0500700

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Revision as of 11:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0500700| Description = Similar to Hydroxyanthranilate hydroxycinnamoyltransferase 3| Version = NM_001059760.1 GI:115459249 GeneID:4336306| ...")
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Gene Name

Os04g0500700

Description

Similar to Hydroxyanthranilate hydroxycinnamoyltransferase 3

Version

NM_001059760.1 GI:115459249 GeneID:4336306

Length

5527 bp

Definition

Oryza sativa Japonica Group Os04g0500700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25392550..25398076

Sequence Coding Region

25392787..25393212,25396743..25397645

Expression

GEO Profiles:Os04g0500700

Genome Context

<gbrowseImage1> name=NC_008397:25392550..25398076 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25392550..25398076 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatcacggtgaggcggtcgacgatggtgcggccggcgtgggagacgccgcgggtgcggctgtggaactcgaacctcgacctcgtggtgccgcggttccacaccccaagcgtctacttctaccgccggggccccgagggagggggcgcgccggaggggttcttcgacggggagcggatgcggcgcgcgctggcggaggcgctcgtgccgttctacccgatggccgggcggctcgcgcgcgacgaggacgggagggtcgagatcgactgcaacggggaaggggtgctcttcgtcgaggccgacgcgcccgacgcctccgtcgatgactacggcgacttcgcgcccaccatggagctcaagcgcctcatccctgccgttgattacaccgacgacatctcctccttctcgctcctcgtgctccaggtgacctacttcaagtgcggaggtgtctcccttggagttggtatgcaacaccatgtggcggatggcatgtccggtttgcactttattaactcatggtctgacctctgccgaggaactcaaattgccatcatgcccttcattgaccgcactctcctacgagcccgagatccaccaactccatcatacccacatgttgagtaccagcctgccccagccatgctgtcctccgtaccccagtctgttactgctaataagacaacaccacctccaactgctgtggacattttcaagcttacccgctcagaccttggtcgactgcgttcgcagctcccatcaggagaaggtgcaccacgtttcagcacatatgcagttcttgctgcacatgtctggcgatgcgtatctcttgcacgtggcctgccttctgaacagcccactaagctgtattgtgccactgatgggcgacaacggttgcagcctccacttccagaaggttactttgggaatgtcattttcaccgccactccacttgctgaggcaggcaaggtgaccagtgggctggcagatggagcagcagtcatccaagaggcgctagataggatgaacgatagctactgccgctcagcattggactacctggagctgcagcctgatttatcagcattggtccgtggagcacacactttccggtgtccgaacctcgggctcaccagctgggtgcgcttgccaattcatgatgcagattttggatggggaagaccagtgttcatgggtcctggtggcatcgcctatgaagggctggcgtttgtcctcccaagcgcgaacaaggatggtagcctatccatagccatctcattgcaggctgagcacatggagaagttcaggaagctgatcttcgaggtgtaa</cdnaseq>

Protein Sequence

<aaseq>MAITVRRSTMVRPAWETPRVRLWNSNLDLVVPRFHTPSVYFYRR GPEGGGAPEGFFDGERMRRALAEALVPFYPMAGRLARDEDGRVEIDCNGEGVLFVEAD APDASVDDYGDFAPTMELKRLIPAVDYTDDISSFSLLVLQVTYFKCGGVSLGVGMQHH VADGMSGLHFINSWSDLCRGTQIAIMPFIDRTLLRARDPPTPSYPHVEYQPAPAMLSS VPQSVTANKTTPPPTAVDIFKLTRSDLGRLRSQLPSGEGAPRFSTYAVLAAHVWRCVS LARGLPSEQPTKLYCATDGRQRLQPPLPEGYFGNVIFTATPLAEAGKVTSGLADGAAV IQEALDRMNDSYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGW GRPVFMGPGGIAYEGLAFVLPSANKDGSLSIAISLQAEHMEKFRKLIFEV</aaseq>

Gene Sequence

<dnaseqindica>238..663#4194..5096#agctgctctccaccaagagctgctccgcccccctaccccgcaacccgttgctttgtgccgcgcctcgctttggtcttcatccgcctcagatctgattcgttctaggttggtctggtgagtggtgcttggcgtttttgttttttgttttttttttgttttcgtgtgtgaggggattgggatgctcacgaggtgtttggtggtatgcgtgggcggcggcggcggcggtggcaggggaagatggcgatcacggtgaggcggtcgacgatggtgcggccggcgtgggagacgccgcgggtgcggctgtggaactcgaacctcgacctcgtggtgccgcggttccacaccccaagcgtctacttctaccgccggggccccgagggagggggcgcgccggaggggttcttcgacggggagcggatgcggcgcgcgctggcggaggcgctcgtgccgttctacccgatggccgggcggctcgcgcgcgacgaggacgggagggtcgagatcgactgcaacggggaaggggtgctcttcgtcgaggccgacgcgcccgacgcctccgtcgatgactacggcgacttcgcgcccaccatggagctcaagcgcctcatccctgccgttgattacaccgacgacatctcctccttctcgctcctcgtgctccaggtgagctccaaatttctagtagcaagtacagttagatccaagcacaaaatcaaacgaggttagagatagctttctggaagtggagcgcaaacaatgctttgcaactgcagctgacaactaagtttggcagtaagccattaattataacattttggggctgattgtatagctaggtcccatgttggctgttgcactaaatgtttggggctgagcttagcgggtcacctactctttggttggctttaattagctgcatcagatgtacggttccatccaggcagttgatgtctttctgttgtgggcggggtctatttttggtttgatgtttatgcttattgtgatagtttagtaggggttgtgtaggaattatagaattttaaaacaccataattcaatgccaataatcagtatccactaaaaaaatgaagtatatgcttcaccttgactgtgtcaaagcctagacaattttgatttgtccagagtgattgtatcatatagatttgaaatgtgtttttcacgttggactccacattgtcttctatgttataccatctaaaagtggcagcagcgtgcatcaatttgtgcattaagagtaacagacaacaaaagccaccggtcgtgcgggtacatccctgccaagcttgagaaactaatactagaggactactttattaagtagccctttaatttgctccggtatatccctatatcctgtcctgaactactacacttatggattcatgacctacagatatttgaaccgagaagcttatcccatttggagctttttaacattggatttgcacgtttaaccctgctagcctttgttgaatacttaaaactttgtggcgatgactatatatattgctttgatcacttaagcataagtgccgatcattccatgtcattccatgttactgctgatatttaagtgttttgatgccagaagtaatggttagattgcattaaaacttgttattagatgggaacaattttagtaggcactaatgttttcttctagggcctctatagctcccatatatggttgattggtcaatctcattgttccaaaatgtcaaccatttgccccatgatgtagacaggaggggacttaattgggtgtgatattaacattttgtgatagttagtctttgactgacaatagctttcttttgcctgttcgataactggagcccttgtcctgtagagcctcatgagctgtttatcctttgatggatacatcattcaggttgcacgttcaattttgtcctaaatgaaacatgtctgatctgctcaccttctggttatccatcatcagctgccctttcatgctggaattcttgtacaataaatcaattaggttgaatgaatcattagtcttacgtgagacatacttgactttgaaataatatggtacagtgtacaacacaacgtgttaatggaaagaatttatttgcttgtaagtctagtagaccttaggagctaaaattttatttagaaaattgttctaataattgaggcacatgctaatactttttccttgcaactgaaaatttgtgcatgcactttccataacataaaactgggccaaaatttacaaggttacaaaccatagtttcattcaatttttttactcgctgatatgtcagcaaccatgactctgagtagtcttggtgcactgcatgttggttggtatggatctgagtgttaactggagcatgttccatctgacaagtttttgcttataataagttaatagatagtactgttttgcgccatattgttccaattttagaagttatttaaaccttgatttcctctcttttatcaactctagttgttgctaacttgttgtaacacctgtttagatggcaagctgacttcaattgtggtgtgcatgcatcaaccttcttttttttgtgggttgggttgaccatggaatgttgcatcctgagctagacaagccatttgcatgtagtccttctctgttagttgccaataaaatgtcttgcagctgtggcaaaggtacttttgcattgcttggtagagtgcttgtcaattgttggatcctaacaccttgttaatgtggatctgaggcctgcgaatatcatgcatcccaaccccaaaaaattgtagagaaaattatgttactctttatctagtgcacaattggagcatctcttgtcatctgtagttgattccttctatgttcatcagaaacttggtgtattgcctgtcttaatggctcttcctagtaaaagcctctaagatcctgtccttgcgatattatattcggtgatgcacttgcagcacatatactcagatcttgcatgtgcatatgttttaaaattcacatatgtaaagcatcatcgaacatttcttgagtggccataaattctaccatgccatagcagtcactgtcaaacacacaatgctatgcattcatgtccatggacaattcagctatttcatgcatcagcatatgtctgttttcattctagaatcactttgccatctcatcttctggttcgtggccttgattttagttgtgttagttttatttattttgttatccgtagcctcattggttagctgattatgctagaaaaaaaactatatcaacatgataccatattggtgattcaacacttaactgatgtgacatagaccaactttcaatgccccctaccatatatgtatttggtctaccattaatagtaagcacgacagtagtcaaaggaccaaacttatcagtaagggagatcacacatgttcctataacaaagcggaatctaatatgcatgcatatagtattatccaattattactatcatgttgtcttgcaatttcatttagtcatcaatacacattgtttacctcatgaactatgtccgtatttgtgattaggtttaaacaattctggctcacatttattaattataaaattgcatgcctgcatgtttcatgttaattaatgataaggcatagtacatgcttgcgctagtttttgtatcacttgtactcttgtttgaaaatttttttttggctgatggcagattctatggcacattttttatggtagaatcagaaatcgggaatttgatggaggatgttgtcatttgtatgcattattacatgacaaaagtttgtatagaagcacaaatttgagtttatatgtttatggttgcagtcaacaattttggtggcaatgcttatgtcttgcatcctaagtcttggaaattcaattagaaatccagtacccagtatagtatggaactgagtttcagttcaacaatataacttgcagatttttgaagagttgtgtcagtacatagttaatttctgacatccagaatgtttatgcctattggtgtaagcaacttctatctgtgtcattcatgtactatctatctcaatacttgtaatgttgctataatggtatatgcagttgaaaatatgaattatatttatcttagtaagtgaaacatttcaagacactgattctccttggttttgttattttgttccaggtgacctacttcaagtgcggaggtgtctcccttggagttggtatgcaacaccatgtggcggatggcatgtccggtttgcactttattaactcatggtctgacctctgccgaggaactcaaattgccatcatgcccttcattgaccgcactctcctacgagcccgagatccaccaactccatcatacccacatgttgagtaccagcctgccccagccatgctgtcctccgtaccccagtctgttactgctaataagacaacaccacctccaactgctgtggacattttcaagcttacccgctcagaccttggtcgactgcgttcgcagctcccatcaggagaaggtgcaccacgtttcagcacatatgcagttcttgctgcacatgtctggcgatgcgtatctcttgcacgtggcctgccttctgaacagcccactaagctgtattgtgccactgatgggcgacaacggttgcagcctccacttccagaaggttactttgggaatgtcattttcaccgccactccacttgctgaggcaggcaaggtgaccagtgggctggcagatggagcagcagtcatccaagaggcgctagataggatgaacgatagctactgccgctcagcattggactacctggagctgcagcctgatttatcagcattggtccgtggagcacacactttccggtgtccgaacctcgggctcaccagctgggtgcgcttgccaattcatgatgcagattttggatggggaagaccagtgttcatgggtcctggtggcatcgcctatgaagggctggcgtttgtcctcccaagcgcgaacaaggatggtagcctatccatagccatctcattgcaggctgagcacatggagaagttcaggaagctgatcttcgaggtgtaagcagactacttatgttatgtcagggagaagttgtagagctagagttctcaggtaaaataccttcaagtgagtcatgggggctatgctcttgctcctgttgagcaaattgtctggccacgttctcttgtaccttagcttgcaaggatatttggccatcaccacagccgtgtgacgatgtgagcaaccaataatgagctgtttttttgttttcgtttaggataggaatcaacaatgaagaaaaggtgctgtattctgtgaaactacatggcagtgttgttcttaccaaaaatacatgacaagtgaattgggtcaagttattgcctgttgtagctcaagtcgatagatgaacatcattgtacagtacgaatgtacgatacgactataacagcctgattgcctatgaactgcaagtaaatgcatgtgaataactg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0500700, RefSeq:Os04g0500700