Os04g0501100

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Revision as of 11:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0501100| Description = Similar to MRS2-5| Version = NM_001059762.2 GI:297603003 GeneID:4336308| Length = 3334 bp| Definition = Oryza sativ...")
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Gene Name

Os04g0501100

Description

Similar to MRS2-5

Version

NM_001059762.2 GI:297603003 GeneID:4336308

Length

3334 bp

Definition

Oryza sativa Japonica Group Os04g0501100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25410527..25413860

Sequence Coding Region

25410527..25411069,25411715..25411843,25411926..25412261,25413630..25413860

Expression

GEO Profiles:Os04g0501100

Genome Context

<gbrowseImage1> name=NC_008397:25410527..25413860 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25410527..25413860 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaccacgatcccaaggagcggctcctcctgccgccccgcgccgcggcggcggcggcggccaatgggccccaccgccgcgccgcgcccgcggcgggcggcggcgggggcggcgtggccatcgacgtccacgggctgaagaggcgcggcggcgggcggcggtcgtgggtgcgcgtggacgcggcgacgggggcgtcggaggcggtggaggtcgccaagccggcgctcatgcggcggctcgacctgcccgcgcgcgacctccgcctcctcgacccgctcttcgtctacccctccgcgatcctcgggcgcgagcgcgccgtcgtctgcaacctcgagcggatacggtgcatcatcaccgccgacgaggcgctcatcctgcgcgaccccgacgtggcggggggaggagctgagacggaggaggccgtgcggaggtacgtcgctgagctgcagcgccgcctcgtggaccgcgccgacgatctgccgttcgagttcatcgccctggaggtcgcgctcgaagctgcctgctcgttcctcgacgcacaggctgtcgaattggaggctgacgcttatcctttactggatgaattgacaacgaaaatcagtacccttaacttggaacgtgtgcggcgcctaaagagtaagctggttgcattgactagaagggtccaaaaggtcagagatgagatagagcagctgatggacgacgatggtgatatggctgaaatgtacctcacagagaagaagaggaggatggaagcatcattgctagaggagcaggcgtttcaggggatgggcaatagtggatttggttcatctttctctgctccagtttcgccagtttcctcaccccctgcttctcgaaggcttgagaaggaattgagttttgccagaagtaggcatgacagcttcaagagtgcagacagtagtcagtacagcatagaagaacttgaaatgttgttagaggcttatttcgtggtcattgattacaccctcagcaagttaacttcggacaacgtccgaaaccaactgatccaatttgaactgctgctgaccacggctacattcgtggtggccatcttcggagttgtctcgggagtttttggcatgaactttgaggtggacttgtttaatgtaccacatgcgttcgaatggacgcttgtcattacaggcgtatgcggcttagtcatattctgctgcttcatctggtacttcaagaagagaaggtttttccccttgtaa</cdnaseq>

Protein Sequence

<aaseq>MDHDPKERLLLPPRAAAAAAANGPHRRAAPAAGGGGGGVAIDVH GLKRRGGGRRSWVRVDAATGASEAVEVAKPALMRRLDLPARDLRLLDPLFVYPSAILG RERAVVCNLERIRCIITADEALILRDPDVAGGGAETEEAVRRYVAELQRRLVDRADDL PFEFIALEVALEAACSFLDAQAVELEADAYPLLDELTTKISTLNLERVRRLKSKLVAL TRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMEASLLEEQAFQGMGNSGFGSSFSAP VSPVSSPPASRRLEKELSFARSRHDSFKSADSSQYSIEELEMLLEAYFVVIDYTLSKL TSDNVRNQLIQFELLLTTATFVVAIFGVVSGVFGMNFEVDLFNVPHAFEWTLVITGVC GLVIFCCFIWYFKKRRFFPL</aaseq>

Gene Sequence

<dnaseqindica>1..543#1189..1317#1400..1735#3104..3334#atggaccacgatcccaaggagcggctcctcctgccgccccgcgccgcggcggcggcggcggccaatgggccccaccgccgcgccgcgcccgcggcgggcggcggcgggggcggcgtggccatcgacgtccacgggctgaagaggcgcggcggcgggcggcggtcgtgggtgcgcgtggacgcggcgacgggggcgtcggaggcggtggaggtcgccaagccggcgctcatgcggcggctcgacctgcccgcgcgcgacctccgcctcctcgacccgctcttcgtctacccctccgcgatcctcgggcgcgagcgcgccgtcgtctgcaacctcgagcggatacggtgcatcatcaccgccgacgaggcgctcatcctgcgcgaccccgacgtggcggggggaggagctgagacggaggaggccgtgcggaggtacgtcgctgagctgcagcgccgcctcgtggaccgcgccgacgatctgccgttcgagttcatcgccctggaggtcgcgctcgaagctgcctgctcgttcctcgacgcacaggtgccactgcgtattatctggaaacctttgcttgcgaattattgatttcattaacaattgagaagtattgacttgcgtggcgtctgctactactacttcattaacaattgcactgctctagcaattatgatttaatataaagtgaagcatttgcatctgcaatgtctattagaccagtagattccactaaacgatatctttttttacttaccaggacactgtatgatgtaaacaatagcttttattttagctattctctgtttaaacagcggtaggaaggtgacatgtgaatcaggcagtgggcaagatcactgtccacaacgttcattatgtcgatactaagtattcatatgatcttacattgttgcatacaactaaacggtagtgtctgaccccaatgataaaagttcaggaatgtagcaactactaatttttcaggatctcatacttagttgttcctttgccttcaagagtgattgcctataacctgaatgtgaacaaaatgaagtaatgcatcacagatttgctgatcaattggcaaatcctgcagtgatcgtcttgtgctacgctcttttaatagtgttcttttgtgcataatgatacggtatctaactggagaaccaaaaacatttgcatatttgtcaggctgtcgaattggaggctgacgcttatcctttactggatgaattgacaacgaaaatcagtacccttaacttggaacgtgtgcggcgcctaaagagtaagctggttgcattgactagaagggtccaaaaggtaaatggactgtgtcaatgtagttttgtttttggcaaacattaaattggttttcaataattggtctatttcccccattaaggtcagagatgagatagagcagctgatggacgacgatggtgatatggctgaaatgtacctcacagagaagaagaggaggatggaagcatcattgctagaggagcaggcgtttcaggggatgggcaatagtggatttggttcatctttctctgctccagtttcgccagtttcctcaccccctgcttctcgaaggcttgagaaggaattgagttttgccagaagtaggcatgacagcttcaagagtgcagacagtagtcagtacagcatagaagaacttgaaatgttgttagaggcttatttcgtggtcattgattacaccctcagcaagttaacttcggtacgaagcctcgctttttatgcccttctgtttattttttacaactacatgggctaataaattttatgttttatatatatatatatatatatatatatatatatatatatatatatattccaacagctgaaggagtatattgatgatacagaggatttcatcaacatacaactggtatagtccccaaatatcttcttcatacttgatagttaatttggtagcagatcaatttccaatctcacaacagaattggcttgtttcttatccaatactgcgagtgcttgcttctcatctgaaactgctatttaatttctctatactcaaagtaaaccgtatgcctcttgccttgtgtattcttgaaactgatatggcaaatgcataattgttggaatcaggagtacaattatctgaccatcatactatgtttactttgacatatatatagcttcttttaacccgtcatttagttgttacagttgactagaaaaaggcacaagacaaactaagatacattcacaagtgtctccaaatattatctaaaaaggtgtctccaaatgggaatgatagattgtactaaagaaaaaatattggacaacgttactgctgattactccctagcattttggaggatgcatgataatacagtaagactaagttagtaaatataaagtataatccgctcacaataacattagttccatttaagctaatgaaaatctattaacatgctaactgagattaacttaaagttgggactggggtgagacagtagacagattgtaagttgggtcagatgtcagaagattacaacagttgacaggctgttggagcatgtggttagcttattttcaatgtcaacaaaaagatcttctgtatcactacatctgttcactataacttcaaatgtctgtaggccagattttttccctattacagaggacagccagtggtcagtttctgtacaacatgcatgtttgcatatgccccttattcaccaatattctggttggtattataggatgcacaatcgtattctgctgtggtggtatttcttttgcacaaagggcctgttggtaagaataaaccgaaggtcctatcttagactaacatcattacagatatgggtttccaccatgtatttaccccagatatcatgtctatcatatatttctgcaaggtttagtagctcggctagagatatgatttcacagactttcatattgctgatattagcagtgtgcaactgctattaggttcagtatgtaagagaaatgaaagttgtttttcatttcttttagcctgtttggtcactctctatctggacaagaaaatatgctcacatgatcatcacaaatgttgttcttacaggacaacgtccgaaaccaactgatccaatttgaactgctgctgaccacggctacattcgtggtggccatcttcggagttgtctcgggagtttttggcatgaactttgaggtggacttgtttaatgtaccacatgcgttcgaatggacgcttgtcattacaggcgtatgcggcttagtcatattctgctgcttcatctggtacttcaagaagagaaggtttttccccttgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0501100, RefSeq:Os04g0501100