Os04g0501500

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Revision as of 11:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0501500| Description = BTB domain containing protein| Version = NM_001059764.1 GI:115459257 GeneID:4336310| Length = 1365 bp| Definition =...")
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Gene Name

Os04g0501500

Description

BTB domain containing protein

Version

NM_001059764.1 GI:115459257 GeneID:4336310

Length

1365 bp

Definition

Oryza sativa Japonica Group Os04g0501500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25433764..25435128

Sequence Coding Region

25433764..25435128

Expression

GEO Profiles:Os04g0501500

Genome Context

<gbrowseImage1> name=NC_008397:25433764..25435128 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25433764..25435128 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaggcgggcgggtgcggttcaacgtgggcgggcaggtgttcgagacgaccaccaccacgctcgccaacgccgggagggagtccatgctcggggcgctgctggactcgtcctggaaccttgcccccaccgccggcggcggcggcggcggtggtggtggaggaggaggaggaggcgtggcggagtatttcatcgaccggaacccggcgtgcttcgcggtgctgctcgacctgctccgcacggggagcctgcacgtgccgccgcagctgccggagaagctgctctacagggaagcgctctactacggcctcctcgaccacgtccgcgccgcgcggtggggcgcgttcgacggcgaccgcctccgcctcgcggcgtcggtgccagggcgggcgcccggggacggcacggccatccgcgccgcgcccgacggggggtgctgcgtcgcgcacgggggcgccgtgcacgtctacaactggatgctcgacgagcgccgcccggtgtcgctcgaccactcgcaggtcaacgacgtggcgtacctcgacgaggccacgctcctgatcgccgcgcgcgagcgcctggggaagtgcgacggcgggatggccgcgttctccgccgtctccggggacctgcggcaccgcttccgcgtcgcgcacgaccgccaggccaagtccttcaccgccggcgcgctggcgttcgaccaggactcgagcatcttcgccagctgcaagggcaggctcaacgagtacggcatcggcgtctgggaccgcgccaccggcgagcaggccgacttcttctacgagccgcctggctgcgccttgggcgacgccgacaagctccaatggctggacgccaccaacgcgctcatggtggcgaccctgttccccaagaccgacaactgtttcatcggcctgctcgatttccgggacaagaacgtggcctggtcgtggtccgacgccggcatggccgcgtcgctcgacgacaagcgcgtgctccacgccatcgccatggaggacgagcggtccgtctgcgtgatcaaccagtacgacgacctcgggttcctcgacctgaggagcaacgccggcggcgtgcggtggagctcccggagcaagttcatgaaccggaaggtgcccagcgaggagagctgctacccgaagctcgccacgcacggcgggcagctcttctcgtcgatgaacgacagcatctccgtcttcagtggccccgagtgcgtcctgacgtccacgctgcggaggagccacggcggcgccatctgcgacttctccatcggaggcgatcgcctcttcgccctgcacaacgaggagaatgtgttcgacgtctgggagacgccgccgccgccgatcatctga</cdnaseq>

Protein Sequence

<aaseq>MGGGRVRFNVGGQVFETTTTTLANAGRESMLGALLDSSWNLAPT AGGGGGGGGGGGGGGVAEYFIDRNPACFAVLLDLLRTGSLHVPPQLPEKLLYREALYY GLLDHVRAARWGAFDGDRLRLAASVPGRAPGDGTAIRAAPDGGCCVAHGGAVHVYNWM LDERRPVSLDHSQVNDVAYLDEATLLIAARERLGKCDGGMAAFSAVSGDLRHRFRVAH DRQAKSFTAGALAFDQDSSIFASCKGRLNEYGIGVWDRATGEQADFFYEPPGCALGDA DKLQWLDATNALMVATLFPKTDNCFIGLLDFRDKNVAWSWSDAGMAASLDDKRVLHAI AMEDERSVCVINQYDDLGFLDLRSNAGGVRWSSRSKFMNRKVPSEESCYPKLATHGGQ LFSSMNDSISVFSGPECVLTSTLRRSHGGAICDFSIGGDRLFALHNEENVFDVWETPP PPII</aaseq>

Gene Sequence

<dnaseqindica>1..1365#atgggaggcgggcgggtgcggttcaacgtgggcgggcaggtgttcgagacgaccaccaccacgctcgccaacgccgggagggagtccatgctcggggcgctgctggactcgtcctggaaccttgcccccaccgccggcggcggcggcggcggtggtggtggaggaggaggaggaggcgtggcggagtatttcatcgaccggaacccggcgtgcttcgcggtgctgctcgacctgctccgcacggggagcctgcacgtgccgccgcagctgccggagaagctgctctacagggaagcgctctactacggcctcctcgaccacgtccgcgccgcgcggtggggcgcgttcgacggcgaccgcctccgcctcgcggcgtcggtgccagggcgggcgcccggggacggcacggccatccgcgccgcgcccgacggggggtgctgcgtcgcgcacgggggcgccgtgcacgtctacaactggatgctcgacgagcgccgcccggtgtcgctcgaccactcgcaggtcaacgacgtggcgtacctcgacgaggccacgctcctgatcgccgcgcgcgagcgcctggggaagtgcgacggcgggatggccgcgttctccgccgtctccggggacctgcggcaccgcttccgcgtcgcgcacgaccgccaggccaagtccttcaccgccggcgcgctggcgttcgaccaggactcgagcatcttcgccagctgcaagggcaggctcaacgagtacggcatcggcgtctgggaccgcgccaccggcgagcaggccgacttcttctacgagccgcctggctgcgccttgggcgacgccgacaagctccaatggctggacgccaccaacgcgctcatggtggcgaccctgttccccaagaccgacaactgtttcatcggcctgctcgatttccgggacaagaacgtggcctggtcgtggtccgacgccggcatggccgcgtcgctcgacgacaagcgcgtgctccacgccatcgccatggaggacgagcggtccgtctgcgtgatcaaccagtacgacgacctcgggttcctcgacctgaggagcaacgccggcggcgtgcggtggagctcccggagcaagttcatgaaccggaaggtgcccagcgaggagagctgctacccgaagctcgccacgcacggcgggcagctcttctcgtcgatgaacgacagcatctccgtcttcagtggccccgagtgcgtcctgacgtccacgctgcggaggagccacggcggcgccatctgcgacttctccatcggaggcgatcgcctcttcgccctgcacaacgaggagaatgtgttcgacgtctgggagacgccgccgccgccgatcatctga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0501500, RefSeq:Os04g0501500