Os04g0501600
| Gene Name |
Os04g0501600 |
|---|---|
| Description |
HMG-I and HMG-Y, DNA-binding domain containing protein |
| Version |
NM_001059765.1 GI:115459259 GeneID:4336311 |
| Length |
6843 bp |
| Definition |
Oryza sativa Japonica Group Os04g0501600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:25437475..25444317 |
| Sequence Coding Region |
25437820..25438324,25438407..25438478,25439009..25439043,25439114..25439182,25439302..25439353 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:25437475..25444317 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:25437475..25444317 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgtcggacggcgcgcagatggaggtggagcggcggcttcgcgacatcggcgcccgcttcacctcgctcccggacgccgacgacgagctgctcagattaatcgaggaggcagaaacctggttggccagggttgaccagtcgccgccggagagcatgcacaaggctctccggccaacaatgagtgctctgattaagaaggagttactggatcacagtgtccctgacataaagcttgctgttgcctcctgtttaacggaggttaccaggatcactgccccggaggccccctatgacgatgatgtcatgaaggatgtatttaccagagttgttgaggcctttgagaagttggatgatatggaaagcccctcctatgcaaggagggttgcgatgcttgaaaccgttgcgaaggtccggagctgtgtcttgatgctagatcttgactgcgacgatctgatacgggacatgtttcaccacttcttcagaaccatatccaatactcatcaagagaatgtcatcacctcgatggaaactgtgatgaagtttgtaattgatgagagcgaagatgtccagcaagatatgccatcctgcctgcttcaagatctagcatcttaccttctgaagaaccttaaaaaggaagaaaaagaaactcttccagcatctttcgaacttgcagagaaggtaattaataagtgttatgagaagttaaagccagtgtttactcctttacttcggggcactcccttggatgagtacagcgaagttgttacatcattgttcgaagatgctttagatgctggagtagccgacaattctgatgcccctggaaaggatatggtggctgatgggaaattatctcataagattgtttcagatgagtcagctcaggaatcatcaaaattagagcaagatgccaattgccctggaaaagacggtactcctccaaacaatacttccacttcggcggttagcaatggttgtgctttaatagacagggtcaagtctccaagtggaccatcctcttctgataagaaggctgaactgccttctgatgacaatcaggcaaaagacactgatgatttgatatccggtgctaaagaaataccagaaccaatcaccacagagcctgaaaagccatctgatcacaatttaaagaaaagccataaacttgatacttccactgattctgaagtggttgatcattctaaggctgttaacaacaacgaggatattttagtctctagggagttatccccagagactgatgatggggataataagctgccaccagagactgggaatagagctgctgatgacaaatcgaaacatgttgataacacacctgctggcaagggaaagcggggccggcctcctgcatcaaagtcgcatgagaagaagaatgttggaaaaggcaaagtatcaggtttagagtctaaaaaagctgacgcagttagtgattctggtggaagggctacaaggcgactagctaaagatgatgatatcaagtcttcattcaaaaagactggtgaaggggaatcttcgaagaagaagcagaaggaaaatttgaaacagcaggaagatactccacccgatgaagacactgatgaggatctcagtttaaaggatatcgtatctcccaagtcttcggccaaaacaggtaaaaacaaaggccaggcaggtgacagtgggggctcaaaaaggaaacgtgcacaggaagctgaagagactccccagcccaagaagaacaaaattcttaaaggaaatcttgttggctcaagaatcaaagtgtggtggcctgatgacagaaagttctataaaggtgttgttgagtcatttgatgttgcttcaaaaaagcacaaggttgtttatgatgatggagatgttgaacgcctacaccttaagaatgaaaaatgggaattcattgatgaggggcgagacaacaatcctgacgcatcgtctgatatgccgcacggcagaaggggtagagttagcttgggtgagcaaacaaaggaaggaaaaatagaaacacccagcagtgggaaacatcgtggcactgatgtcgctgatcctcccaagaaaagaggacgccctaaaggtgtgcgctccagcaatagttcacaaaatgatgacagtcctttgaaggggaaaagtgcagaaaacgatgatgaagatatatccaagacacctaaaagtggcagtgccctcaagaatgaaggtggaagatcatctcgatccactggcaagacaaaggatggcctgctaaagggaagcaacaaggatgagactggtaacactaaaagcgcaagcaaatcaaaaaatgatggtggcagcaaacacaaggattcaaaagatgaagctaaatccagcggatcaaatccaaaaggtgcaagcactcccaaagctgctgatggatccaagacaaatggtctttcgaccaaaagaaagcaaaaggagaaagaaggcgagtcatctgaagaggaagagcatgtgtctgctaaaatttctactggaaagaagcgcagaaggaaggctcataactaa</cdnaseq> |
| Protein Sequence |
<aaseq>MASDGAQMEVERRLRDIGARFTSLPDADDELLRLIEEAETWLAR VDQSPPESMHKALRPTMSALIKKELLDHSVPDIKLAVASCLTEVTRITAPEAPYDDDV MKDVFTRVVEAFEKLDDMESPSYARRVAMLETVAKVRSCVLMLDLDCDDLIRDMFHHF FRTISNTHQENVITSMETVMKFVIDESEDVQQDMPSCLLQDLASYLLKNLKKEEKETL PASFELAEKVINKCYEKLKPVFTPLLRGTPLDEYSEVVTSLFEDALDAGVADNSDAPG KDMVADGKLSHKIVSDESAQESSKLEQDANCPGKDGTPPNNTSTSAVSNGCALIDRVK SPSGPSSSDKKAELPSDDNQAKDTDDLISGAKEIPEPITTEPEKPSDHNLKKSHKLDT STDSEVVDHSKAVNNNEDILVSRELSPETDDGDNKLPPETGNRAADDKSKHVDNTPAG KGKRGRPPASKSHEKKNVGKGKVSGLESKKADAVSDSGGRATRRLAKDDDIKSSFKKT GEGESSKKKQKENLKQQEDTPPDEDTDEDLSLKDIVSPKSSAKTGKNKGQAGDSGGSK RKRAQEAEETPQPKKNKILKGNLVGSRIKVWWPDDRKFYKGVVESFDVASKKHKVVYD DGDVERLHLKNEKWEFIDEGRDNNPDASSDMPHGRRGRVSLGEQTKEGKIETPSSGKH RGTDVADPPKKRGRPKGVRSSNSSQNDDSPLKGKSAENDDEDISKTPKSGSALKNEGG RSSRSTGKTKDGLLKGSNKDETGNTKSASKSKNDGGSKHKDSKDEAKSSGSNPKGAST PKAADGSKTNGLSTKRKQKEKEGESSEEEEHVSAKISTGKKRRRKAHN</aaseq> |
| Gene Sequence |
<dnaseqindica>5994..6498#5840..5911#5275..5309#5136..5204#4965..5016#4483..4565#4283..4384#3125..3859#2997..3047#2026..2217#1793..1943#816..997#477..680#150..257#gctgctctcgccctctcctccccctccccctccccctccagtcccctcgcgaaaccctaactgtctccccctcctcctcctcctcctcctcggggtagatcttcgcgcgggctctcccgctggggcggcaccgcgcgcgccccgccgtgatggcgtcggacggcgcgcagatggaggtggagcggcggcttcgcgacatcggcgcccgcttcacctcgctcccggacgccgacgacgagctgctcagattaatcgaggtgagcgcccctgaccctgcttttttttttcttcttattattttctctcgcgttgttcgtttctaggttgccgtggagattggagcctggcatgataggatgtactggttgttatattgatgtgaagtttaatcctcgctgtttggatctgtataaatagaatgttttatttatttattaattgggtagaaacttagaactgctcattcgtttatgcaggaggcagaaacctggttggccagggttgaccagtcgccgccggagagcatgcacaaggctctccggccaacaatgagtgctctgattaagaaggagttactggatcacagtgtccctgacataaagcttgctgttgcctcctgtttaacggaggttaccaggatcactgccccggaggccccctatgacgatgatgtcatgaaggtaaatgtcttcttgtcgtcatggaattgttgtgcttgcttgtagtgacccttgtcactggctctgctgcaagatttatcgctacggaattgttgtgcctgctcacactgaccattgtcacttgctttgttgcaggatgtatttaccagagttgttgaggcctttgagaagttggatgatatggaaagcccctcctatgcaaggagggttgcgatgcttgaaaccgttgcgaaggtccggagctgtgtcttgatgctagatcttgactgcgacgatctgatacgggacatgtttcaccacttcttcagaaccatatcgtgtgtaacttcttttgctggttcatttcgtattttcttcaccttgagaatgccgattctttcgggttcttaaattgactagggatatgttgtggttctggtattgacttgcaagatgcctgattaatattatgctgctaatttggcatgattatgtacatggagaagaagttagaactgcatttgcaattacactcaccagttaagattactttaagggaaacatcatgtattagtattactatggtttgtcgatatcattgggcgttgttgcgtttgattttttacttgaagcaccaaattgaccgcagctatcagttctgattgcaaatctttggggaataacattttttacatgcatatcgatgctaaattttacataccgaggagttgccatatcccattccccagtttttcattgttagcttatgttcatcatttattttaaaaccgacaagcggttgttccctgcgtaaaatataatggcacaatctgccatgaagtaattttaatcctttgttgtcctctgtctgtttgtctagaacctgctaatttctgcttttctcttatcacataataatgtgcaaaagcatgcatgatgatttgttccaacaagtttacacagttcacaatttgctttgacgtgaaaactcataaagtcacaatagttcctatgtgttttcctgtgtatatttgctttatgtctatgttcatggttctgccctgcgtatgttctgttaattttcttaagtcttctttatcctataattcattactttgttatatttatttcagcaatactcatcaagagaatgtcatcacctcgatggaaactgtgatgaagtttgtaattgatgagagcgaagatgtccagcaagatatgccatcctgcctgcttcaagatctagcatcttaccttctgaagaaccttaaaaaggaagaaaaagtaattcgaattcacttacatctttcatattaaaattaatagatctgatcatcttcactaaaatttcaaatttgctctgtaggaaactcttccagcatctttcgaacttgcagagaaggtaattaataagtgttatgagaagttaaagccagtgtttactcctttacttcggggcactcccttggatgagtacagcgaagttgttacatcattgttcgaagatgctttagatgctggagtagccgacaattctgatgcccctggaaaggatatggtcagtcaaactactaacaaatttcctttttgaatattaattaaggtttgctcaccatagagttagtgcattttgtggcattctcaatgtattttcagatgtgttcaaatgggcaaagactgctcatgttctttttattagaggtggtcaacctttaacacatatttttagtcttacacattgagttcaactatttgctactggaaatggttagatctgtcactctatagaggtataatatggtttatgctatatagccaccactgggacttgggagaggaacacgagacatagaaatgttttgacaggcatttctttgtatgatcaactgtattttaatttaaatatcatgctgtatataaactattttgacaggcaattctatggcattctttctggagtaatatgtatgttaaatttaaaatgtcacgttgcccatcaggtaataactagaatttggaccctggaatgctgtcttagcggttgaaagttatattgactgaaaaagtatcaactgtgaaatatcaagcagtggtcttgggattaattttgtttttttggtgttattcaaagatatgcttgattgtatgttagtatattttttggtttctggtagagtcaatagaatggtccatgacctggtgttatcaactgtgtgatctgtaaaagtttgtagtgtaaattctctcaatctgatatgatatcataccggccaatgttcttctgatatactaattagtttatttcagccaagctgactatgaaagcttgtgatgcaggtggctgatgggaaattatctcataagattgtttcagatgagtcagctcaggtatgtcgctactgacattcaatctgaagttcttgaaagtgagatagatatcacaatgaacatattttattccttaggaatcatcaaaattagagcaagatgccaattgccctggaaaagacggtactcctccaaacaatacttccacttcggcggttagcaatggttgtgctttaatagacagggtcaagtctccaagtggaccatcctcttctgataagaaggctgaactgccttctgatgacaatcaggcaaaagacactgatgatttgatatccggtgctaaagaaataccagaaccaatcaccacagagcctgaaaagccatctgatcacaatttaaagaaaagccataaacttgatacttccactgattctgaagtggttgatcattctaaggctgttaacaacaacgaggatattttagtctctagggagttatccccagagactgatgatggggataataagctgccaccagagactgggaatagagctgctgatgacaaatcgaaacatgttgataacacacctgctggcaagggaaagcggggccggcctcctgcatcaaagtcgcatgagaagaagaatgttggaaaaggcaaagtatcaggtttagagtctaaaaaagctgacgcagttagtgattctggtggaagggctacaaggcgactagctaaagatgatgatatcaagtcttcattcaaaaagactggtgaaggggaatcttcgaagaagaagcagaaggaaaatttgaaacagcaggaagatactccacccgatgaagacactgatgaggatctcagtttaaaggtagtttctttgtcaacagtagatgatttgaggttttgctttgcacataggtcgtgcataagtatatcactagcagaaggttggatttctgttttacatattcatagttttatatctgtctgactccatgttctaaggtttcctggtaggagtgttatttagaaatagtggaacctcaaaacattttatgctttccaaaactataacatgttgggtcgatggctctcatatttttaaacttctctgcctttcatccttttaacttcctgattggcttggcaacctgccaccaactattttgtatctacggcgaaattcatagagctttatttgcatttggtgtaaatctgatgggtttgtgttgaaatgtttgtgcatgcgatgatgatgatcgaccacaatgactgttttatcataacgcaggatatcgtatctcccaagtcttcggccaaaacaggtaaaaacaaaggccaggcaggtgacagtgggggctcaaaaaggaaacgtgcacaggaagctgaagaggtatatgcatacttgattcttattgctgttagtgaatagtcttgttgcaagctgatttctgtttcagttgttcaaatctttttctttgctttcatcagactccccagcccaagaagaacaaaattcttaaaggaaatcttgttggctcaagaatcaaagtgtggtggcctgatgacagaaagtaagttctataaccatcatttatgtttctcaaatgtaggagtttgttaagattgtgtttgtaggctaactagtacccattgcttcattggttatgatgatattttcatatgtatgaacattattttctaaataaatttcttgatctagattgacatggcatattcttttgcagacgacgcttcagttgcattattcgttactttgatatgatgtttctaaatatgtaccttttctttaataatatatgcagtacaattattcattctagattgagttacacacctatattttatctatcctggtctcctcactcttttttgctacgatatgtgatttcttacatgagttttactggtgtgttgtttggcttgttctgaatctgtttcttgctctgcaggttctataaaggtgttgttgagtcatttgatgttgcttcaaaaaagcacaaggtgtgcattgggaaatgagctctgacttatgcctttttgctgtccaaatcactacaaatgctagttttttttttgagctcagtttcatctttggataccttcatttttttggcacccaggttgtttatgatgatggagatgttgaacgcctacaccttaagaatgaaaaatgggaattcattgatgaggtatgtccatgcagtttgacgccattatctatcctttctagccactttctgattcatctgctacctgcaggggcgagacaacaatcctgacgcatcgtctgatatgtatgtaaataaatattctactttgcatcatcgatatcctcttaaagttttgatgactttcttagttacatcagcactaaaatcttttatatgattcggattgtcattcctataaacctgcaatctccttatcttgaatctttgatatgggggttcaagatgcttggaatgcttcttgaatgggttaacggagacaaaataagttgctctagcatgaatgaccttgattttctgagctttgagttgtggttgattggattattcccagcatccattatcttcagtttatgtttctaccatatagattataagatttactgtgtttctgtttgtattgtaactttactatttatgatcaggagttccaactgtaatcacataatttatttgttcattttgctgcgacatgcatactgctggcagatgttacctaatgctccagtttcgttcatcatcagctattatcctttataatatggttttgttttctttctttttatatatttgagttctttgatcatttttaccaggccgcacggcagaaggggtagagttagcttgggtgagcaaacaaaggaaggaaaaatagaaacacccagcaggttcttttcatatggatgtgccatattgatccagcctacatgcaacaccttaactgaaactgttgtcttgttttgtatgcagtgggaaacatcgtggcactgatgtcgctgatcctcccaagaaaagaggacgccctaaaggtgtgcgctccagcaatagttcacaaaatgatgacagtcctttgaaggggaaaagtgcagaaaacgatgatgaagatatatccaagacacctaaaagtggcagtgccctcaagaatgaaggtggaagatcatctcgatccactggcaagacaaaggatggcctgctaaagggaagcaacaaggatgagactggtaacactaaaagcgcaagcaaatcaaaaaatgatggtggcagcaaacacaaggattcaaaagatgaagctaaatccagcggatcaaatccaaaaggtgcaagcactcccaaagctgctgatggatccaagacaaatggtctttcgaccaaaagaaagcaaaaggagaaagaaggcgagtcatctgaagaggaagagcatgtgtctgctaaaatttctactggaaagaagcgcagaaggaaggctcataactaatttgctctggccttgtgcagttcttccaaggggtacttatgaggcatgcagtctgaaggtttttggcatgagcagcctagcaatttatatggcttccatcccttggctggttgcctgccaagtcttgccctaatcgaccgtcacgaaacagctggtagttgtagcagttgcagtggtagttgtaatgtaggtgttacttttgttccttgtggtcagctgtgagcctctagcaaatatggtttcttgcttgctgtcgttcaacccttattagattgtattttctgctggagctatttgagacgtcaattttgcagcaagcatgaatggagagaaatgtcgtagttc</dnaseqindica> 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| External Link(s) |
