Os09g0250700

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Revision as of 07:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0250700| Description = ABC-1 domain containing protein| Version = NM_001069214.1 GI:115478167 GeneID:4346513| Length = 7504 bp| Definition...")
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Gene Name

Os09g0250700

Description

ABC-1 domain containing protein

Version

NM_001069214.1 GI:115478167 GeneID:4346513

Length

7504 bp

Definition

Oryza sativa Japonica Group Os09g0250700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:4421172..4428675

Sequence Coding Region

4421710..4422312,4422502..4422645,4422927..4423052,4423609..4423696,4423905..4423998
,4424570..4424663,4425033..4425087,4425575..4425666,4425796..4425966
,4426117..4426173,4426263..4426346,4426431..4426515,4426846..4426907
,4427159..4427233,4427352..4427456,4427824..4427965,4428212..4428285

Expression

GEO Profiles:Os09g0250700

Genome Context

<gbrowseImage1> name=NC_008402:4421172..4428675 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:4421172..4428675 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatgatgatggctgatctcagcttctcatcatctatctccaatgtgaagctccaaaggttcagggcatcatcgaatgagacatctttgattaagagatctccggtgttccgtgcagaagctcggtcaactgaaactgagaaattccgtaccaatggccgcgcgataaagatggtcccgacaacagagttgaaaaggagcaagagtggtgtccgagtaaggccagacacagttaatggctctccaagtggtgctgtcaatggctcaaccaaggtggccatcaatggttctcctaatgctgctgtcaatggttcgatgaaagcggtaactaatggttctgttaatgggactagtttggttaaaggtagcaatatgtctgctctagtgaagacccaaaagcgaatgagacccaatgatgatccctttgaagaggagctgaaggttttgccctctgatgaaggattcagttgggcaaaagataattacaactcgtggcagaggagtgcagatatctggtcttttgttctttcttttcgaatccgcgttctattcgacaatgccaaatgggcctacgcaggtggattctcggaggaaaaacagaaagttcggaggaggaaaactgcttcatggttaagagaacaagtattgcagcttggcccaacttttattaagcttggacagttatcttcgacaagatctgatctgtttccaagggaatttgtggatgaacttgcaaaattgcaggatagagtacccgcattttctcctgagaaggcaaaggctttcatagagaaagaaatgggttgcccaattgaagttgtgtacaaggaatttgacaatcgtccgatagctgctgccagtcttggtcaggtacatcgtgcagtgcttcacaatggagagagagttgcagttaaagtgcagcgaccagggctcagaaaactttttgacattgacctaaggaatctaaaactagtagctgagtattttcagagcagtgaggcatttggtggtccttcaagggattggattggtatttatgaggaatgttccaaaattttgtatgaagaaattgattacatcaatgaaggaaagaatgctgacagatttcgccgagatttcagaaatataaagtgggtccgtgtgccacttatcatgtgggactacacaactgaaaaggtgttaaccctcgagtatgttcctggtattaagataaacaacttgactttgttggataatcggggatatagtcgttccctgattgcatctcgttcaatagaatcttatcttattcagatactgaagaccggtttcttccatgctgatccgcatcctggaaaccttgctatagacacggatggctctcttatatattatgattttggaatgatgggtgaaataaaatcattcactcgggagagattactttccttgttttatgctgtgtacgagaaggatgcaaataaggttatgaaagctctaattgacctagaagccctccaggcaacaggagacctttcaccggttagaagatccatacaatttttcttggacaatctgctgagtcagacgccagaccaacagcaaactttggctgcgattggagaggacttgtttgcaatatcacaggatcaaccttttcgtttcccatccacatttacatttgtcataagggcattctcaactcttgaagggattggatatatattggatccagatttttcctttgtgaaagttgccgcaccttatgcacaggaacttctagacttgaaacagagacgaacaagtgcacctgaactagtccgggagataagaaagcaagcaaacagtgctcgtgactctaccatctcaatgccctacagaatacagcgaattgaggattttgttgggcaacttgagtccggtgatctgaaacttagagtcagagtacttgagtctgaaagagctgctcgtaaggcgaatgtacttcaaatggcgaccatgtatacagccattggtggcacgctgttgaacgttggggtcacattgagtagccaagggaaccaaatagtggcaaacgggtcttttgttggcgcaggcatattcttggcattgctcataagatctatgcagagagtgaagaaactcgacaaattcgagacaatgatataa</cdnaseq>

Protein Sequence

<aaseq>MAMMMADLSFSSSISNVKLQRFRASSNETSLIKRSPVFRAEARS TETEKFRTNGRAIKMVPTTELKRSKSGVRVRPDTVNGSPSGAVNGSTKVAINGSPNAA VNGSMKAVTNGSVNGTSLVKGSNMSALVKTQKRMRPNDDPFEEELKVLPSDEGFSWAK DNYNSWQRSADIWSFVLSFRIRVLFDNAKWAYAGGFSEEKQKVRRRKTASWLREQVLQ LGPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPAFSPEKAKAFIEKEMGCPIEVVY KEFDNRPIAAASLGQVHRAVLHNGERVAVKVQRPGLRKLFDIDLRNLKLVAEYFQSSE AFGGPSRDWIGIYEECSKILYEEIDYINEGKNADRFRRDFRNIKWVRVPLIMWDYTTE KVLTLEYVPGIKINNLTLLDNRGYSRSLIASRSIESYLIQILKTGFFHADPHPGNLAI DTDGSLIYYDFGMMGEIKSFTRERLLSLFYAVYEKDANKVMKALIDLEALQATGDLSP VRRSIQFFLDNLLSQTPDQQQTLAAIGEDLFAISQDQPFRFPSTFTFVIRAFSTLEGI GYILDPDFSFVKVAAPYAQELLDLKQRRTSAPELVREIRKQANSARDSTISMPYRIQR IEDFVGQLESGDLKLRVRVLESERAARKANVLQMATMYTAIGGTLLNVGVTLSSQGNQ IVANGSFVGAGIFLALLIRSMQRVKKLDKFETMI</aaseq>

Gene Sequence

<dnaseqindica>539..1141#1331..1474#1756..1881#2438..2525#2734..2827#3399..3492#3862..3916#4404..4495#4625..4795#4946..5002#5092..5175#5260..5344#5675..5736#5988..6062#6181..6285#6653..6794#7041..7114#agtgaaggattagttgctgatgtatgcattgtttcttgggttttgtttctgggtcgatggaatggaatatagcaagaatgggctaatttggtggctgcttgctcctagttgttatgtcgatctgtgtttatagatgaattgacaagcagtttggagaaaaaaaatattcacattttgacagttaatttgtagttcgatcaggaattaatttttgatatttgctccttaatctgttggagtatgagcacttctcatgaatctctttggctaatccattccgaacaagatattagatgattttctaagaacgtctgctgaatatctgtatagcaattatgcaaccatgtggtgcctatgtaatccagtccttaatttcttggaaatggaaattgaattttatagtttaggacatttacacaattatctcaaggctttagtttcatttggtaggctggcatttcattgcaattacatttctttttgttctgctgtggatactgatgaggaaatgtttacgaacaggagcttttgattagccatggcgatgatgatggctgatctcagcttctcatcatctatctccaatgtgaagctccaaaggttcagggcatcatcgaatgagacatctttgattaagagatctccggtgttccgtgcagaagctcggtcaactgaaactgagaaattccgtaccaatggccgcgcgataaagatggtcccgacaacagagttgaaaaggagcaagagtggtgtccgagtaaggccagacacagttaatggctctccaagtggtgctgtcaatggctcaaccaaggtggccatcaatggttctcctaatgctgctgtcaatggttcgatgaaagcggtaactaatggttctgttaatgggactagtttggttaaaggtagcaatatgtctgctctagtgaagacccaaaagcgaatgagacccaatgatgatccctttgaagaggagctgaaggttttgccctctgatgaaggattcagttgggcaaaagataattacaactcgtggcagaggagtgcagatatctggtcttttgttctttcttttcgaatccgcgttctattcgacaatgccaaatgggcctacgcaggtggattctcggaggaaaaacaggtatgcttttatggtacaaataagctttagttaaagaattctgcattccctttaaagtttcctatgcgaaagctttaccttttttgtggagtaactggtaattataatggatcacagagatttgggttgctaaaatgaaaagatatttattttttgtatgcgtggactaaatcatcccatatatcacagaaagttcggaggaggaaaactgcttcatggttaagagaacaagtattgcagcttggcccaacttttattaagcttggacagttatcttcgacaagatctgatctgtttccaagggaatttgtggatgaacttgcaaaattgcaggtatttattttttgtgattccatatcaaattcttaatttatttgctaactctactgtgtttgtgttaacctccaactgctctagtattttctgtattcctcttgttgattttttagctctacagtaaactgattgtaatttcataataatgaatgaaaggacacaattattattgtaatgatgaccgacaagagaattatctatagtagtaaaccaaaatcaaaacagttcattagaacttagaaaagtatatatattgtaacttccggttttttgtgcaggatagagtacccgcattttctcctgagaaggcaaaggctttcatagagaaagaaatgggttgcccaattgaagttgtgtacaaggaatttgacaatcgtccgatagctgctgccagtcttggtcaggtgcttagttttgcactctatcaaaacataaatctgatcttctcagtaccaatcagtgtatatcatactatatcacctttttctcaaggattttttctatacattttacttgttcaattcctctatatcatacattttctatacattttttctatatcttactatatcacctttttctcaaggattttttctatacattttacttgttcaattcctctatgaaagccaacagctgctgctagtcctctgcatgtttttgtttcaagttgtaaaattacacttcactatatgcttttcatatcgtattggccaatattttcttcactacatgtttctcatatctgtatatgtcaataaatgcctaccatttctgctcattctcacctgattcaggttgtcctttcctgttatactactggtccatgtttgttttttgaggggaaacagcgatacttattaataagctacaaaatttggtgtccttgacaatcttcatcctatcttctttatttataaataaaatctgcttacaggttccttcatatatattgttcaggtacatcgtgcagtgcttcacaatggagagagagttgcagttaaagtgcagcgaccagggctcagaaaactttttgacattgacctaagtaagagaaattattaccttttgacattctacccttttgcgtttgtttattatccttttactctttactatttttttctcaaaatatgataataacgtaatttaaaatgcttgtttttcaagaaaaaaattagatggctttaatatgaaataactcagttgttgtttaatgttgataatagttttgattattctttggaatcttgtagggaatctaaaactagtagctgagtattttcagagcagtgaggcatttggtggtccttcaagggattggattggtatttatgaggaatgttccaagtaagtagcaatatagtcttcttggatcattgaatgtattctattgacttgatatttttattatttgacatctctagaatacatcccaaccttttctgccaaaaactttgttggaattgtgtggaataactagttccctaccatagcacctgatattgcaacctctatcgttcttcaaataaaaacagtagtacagtactacctcagtcccgaaatataaaggattttggcaatgcacctggataagtgtttgtcaaggtacgttatcagaacaccttatatttcgacggaggtagtattgcttatgctgttcaccatgtgagtccattattaaatcaataaatgaacctgtcctttggaggggaacaaagaccttgaatacgtcatagattgaggtataaggactaatggatggaagatatttggttagaaactttttgcaatatctgtagggctatgccaatttttgtttatttacagatttctgaaattattgtagcttccacagtccatatatttcttcagaaagtgagttgacataagaattgaccatcatgatttgtgatttcagaattttgtatgaagaaattgattacatcaatgaaggaaagaatgctgacagatttcgccgagatttcagaaatataaagtgggtccgtgtgccagtacgtttcttcaaactcaaaacacaacttgtttttgggttttgtttccatgcttgacttcgcttatatcttttaagaggccatatattaatctgcctagtcctgtttcaaacccatatttgtaatcaatctgattgtgtcgacattcttccaccaccatggcatcctcctataatcacctccttgatctcattgacatctgcatgaaaaccatggttagttgttaaaaaacatgcagcaatgtctttttttccccgtttattactgtagtgccatgtctcttgtcaacattgaaggcatcatttgggtgtgtgtggtgtgtctttttcctgaagttttacatgaataatcgttatgttatttttctagcttatcatgtgggactacacaactgaaaaggtgttaaccctcgagtatgttcctggtatgtgctagttatttcttgtaacagaaattagtatgtatagtgttgaattggactgactattgttctttggatagtttgtacataacaattatctcaatttcatttgttaattgctaatatatgaaaataaaattatgacagcattcaaaattagattatttattttaatgtgttcttatacttcctccatttcatggttgtcaaatccatattatcagtttcttgttattcaaatctgacaataaaatttctgtgcttcattaatctgattattttcatactcaagtattgctactacacatatttttccttctaaaatatacaattaagatctgacagtgattgtgagaggatggttgtcctttcaatcaaaacttggtagaatatgtttttttattaagagaatgcttttatttgtagaacctgctcttaccgcaactttatcttaactatttggctttactcaatctcttaatttttacaggtattaagataaacaacttgactttgttggataatcggggatatagtcgttccctgattgcatctcgttcaatagaatcttatcttattcaggtagatatatttcaagaatttgacttccgatggtttgtatattttttaatgctcaatgtctattagagacgagttgaatatcatttaatgtggtggttttcctctaaagttcttcattgtaccacacagatactgaagaccggtttcttccatgctgatccgcatcctggaaaccttgctatagacacggatggctctcttatatattatgattttggaatgatgggtgaaataaaatcattcactcgggagagattactttccttgttttatgctgtgtacgagaaggatgcaaataaggtatctcaatattttcatacgaacagctcatatacagcaacatttctctctattttttatgattttacctagcatgctattgcaagttaagttgcccaaatcactaggcacttcatctttctctcagtctcattcagctctatcttgcaggttatgaaagctctaattgacctagaagccctccaggcaacaggagacctttcaccggtttgtagaacattgtagttatcagatgggaattcctggaataattgcatttaaaatatgccctttcccccttttctttggttatttaggttagaagatccatacaatttttcttggacaatctgctgagtcagacgccagaccaacagcaaactttggctgcgattggagaggttgtctggccttacaattttcttaggattagctttataaactgggatattttagttaatatattatttttcttccctttgcaggacttgtttgcaatatcacaggatcaaccttttcgtttcccatccacatttacatttgtcataagggcattctcaactcttgaaggttctctttttctttatatatctatattccggagataattatcattatctgcatttctcttcttactattttttttgtcataaatcaatatcaaaggcaaatgtgtatctacctaatgctacaaaatatgtaaggttcactgatggaaaactaggctgttaataagatttgatgtctgttcaaacaatctgctaattgatcggcttttctaacttccctctgattgtgacatctctgttagtgtacaatattattatgtatgtgattgaccacggaaaagtttacatatttataggttaatgaccttgttgttataattatatttgatagggattggatatatattggatccagatttttcctttgtgaaagttgccgcaccttatgcacaggttagaattattgtccatccttttattgtccctatatctgtattgtgtatttgggaagtgcattgatacaactattttagaaaagttagtgtatgtcaaaataaagtaactaataattcgaatcatacacgcttctttgttatttttgctgagacaattttctttctttcctttatcttagcagcgtagtcactatcttcagactttgcctgtgcatgcaatgctaatgaataatttattttgaacttcaggaacttctagacttgaaacagagacgaacaagtgcacctgaactagtccgggagataagaaagcaagcaaacagtgtaaggacacaaatatttttctagtattccagtagatgtgcattttttcccttttgatctgcatattgtgacaatggcacatcatactgatcaatgttctgctgggtgtacatgacaggctcgtgactctaccatctcaatgccctacagaatacagcgaattgaggattttgttgggcaacttgagtccggtgatctgaaacttagagtcagagtacttgaggtaagattattctggtaacaagttcttttactatctagcatcttgttaaggttgttggagattgataggaataaaaaaaacaatctgctttacacatttttgcattatgttaatgaatgattttaagcactaaaccgtctgtcatacataaatattcaatacttttaattaaaagaatatgcaagtattattcttgatggacagagaataactacaaaattattctttttttaatcccataccgatatttaccaaaagctcatccattcgcttgtttagcatcactacctgcaattatcagaaaactagtgcttcttttttggctgtcctgaatctgaaaacatgctgaacttaatgccattttcagtctgaaagagctgctcgtaaggcgaatgtacttcaaatggcgaccatgtatacagccattggtggcacgctgttgaacgttggggtcacattgagtagccaagggaaccaaatagtggcaaacgggtcttttgttggcgcaggtggggttctcttttttgtttggtgaactttgtttcatacattctccatatcattgcggacgattcagtcttttgttagtctttgttacttcttatgtgatatattactagaacatcgaggttgatccttttgatccgaaaatgtccaacttgatcaagctacttcatgcaggctctaaggatgtgaaaaaaaaagtacatgttcttgattcggtctaattgctgttcccaactgaaaccatgcaggcatattcttggcattgctcataagatctatgcagagagtgaagaaactcgacaaattcgagacaatgatataattgtcaacttgtcatatcattccaattggctttgctggaagctcataatctgtaccagaagcatggcaagacaatactccctctatcccaaaaagtgtccaactctagggattaatatacacacaccccctgtccttgtctagattcatcactagagttgaactctttttgggatagagtgaataggtcacctctcttttattctgtaaaaaaattacatgggggagtttatccctttatagccatacatatatagtttggtaggagatgccattcttttttttagaaaaaaacaatggaatcaacttgttacagcctgtaaatctgtacaattgtatcatttttgagccgtaaggtctctctcagaaatgaaacgaaatctaggtattc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0250700, RefSeq:Os09g0250700