Os04g0505400

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Revision as of 11:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0505400| Description = Protein of unknown function DUF247, plant family protein| Version = NM_001059788.1 GI:115459305 GeneID:4336336| Leng...")
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Gene Name

Os04g0505400

Description

Protein of unknown function DUF247, plant family protein

Version

NM_001059788.1 GI:115459305 GeneID:4336336

Length

2109 bp

Definition

Oryza sativa Japonica Group Os04g0505400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25630974..25633082

Sequence Coding Region

25631259..25632938

Expression

GEO Profiles:Os04g0505400

Genome Context

<gbrowseImage1> name=NC_008397:25630974..25633082 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25630974..25633082 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtcgccgtcttcaacaaggacgtcctgagctggtacctgatcacggtcaagctcaaggagaccgtcgatgccaacctcaacaagtccgcgccgccgcccggcgcgctgccgctgtggcaggcgctgaaccgcaacctgccgctgctcaccaacggcgaggccgccggagcgggaggcgacgcgctgccgccgcgccaggagcgggagcgggaggtgaaggtccaggtgcagtcgccggcgcacagcccgaagccgcaggacccggaatgggtggtggccatccgcgggaagctggcgcaggcgcgcgccgaggaggcagcgtgcccgtgggcgcggctgtccgtgtaccgcgtgcccaagtcgctccgcgacggcgacgagcgcgcgtacatgccgcaggtggtgtccatcggcccgctccaccgcggccggcggcggctgcgggagatggagcggcacaagtggcgcgcgctgcaccacgtcctgaagcgcacggggcacgacgtcaccgcctacctcgacgcgctgcggccgatggaggagcgggcgcgcgcctgctacgacggccgcgtcgccgggatgcaggggaacgagctcgtcgagtgcctggtgctggacgggaccttcgtgctggagctcttccgcggcgcgcaggacggcgggaaggggttcggcgacgacctggggtactcgcggcacgaccccatcttcgccatgcgcggcgcgatgcacgccatccgcaacgacatgatcctgctcgagaaccagatacccctgttcgtgctcgacctcctgctcggcctccagctcggcaacccggagcagaccggcgccgtcgccggcctcgctgtgcgcttcttcgacccgctcatgccgaccgacgagccgctgctccgcaaggaccggtccaagctggagtcctccatcggcgcctcaccggcggcggcggcgttcgagttcgacccgctgtccggcccgatgctccattgcctcgacgtgttccggcgcagcctcctccgcgcggggctgcagcccaccccgccgccccccgcgcggctgtggctcaagaagtggtcggggctccggcgcgtggcggacaagcggcggcagcagttcgtccactgcgtgtcggagctccgggaggccggcatccggtgccggcggcggaacacggaccgcttctgggacatcaggttccacgacggcgtgctccagatcccgcgcatcctcatccacgacggcaccaagtccctcttcctcaacctgatcgcgttcgagcaatgccacatggacatcgccaccccgggcggcaacaacatcacctcctacgccatcttcatggacaacctcatcaactccgccgacgacgtcaagtacctccacgaccgcggcatcatcgagcactggctgggcagcgacgccgaggtggccgacctcttcaaccggctgtgccaggaggtggtgttcgacatcaacgacagctacctctcggggctctcggaccaggtgaacaggtactacgaccacaagtggagcacctggatcgccagcctcaagcacaactacttcagcaacccatgggcgatcgtctcggtggtcgccggtgtcttgttgctgctgctcaccatgacgcagaccttctacggcacctacagctactacaggccgatgcattga</cdnaseq>

Protein Sequence

<aaseq>MVAVFNKDVLSWYLITVKLKETVDANLNKSAPPPGALPLWQALN RNLPLLTNGEAAGAGGDALPPRQEREREVKVQVQSPAHSPKPQDPEWVVAIRGKLAQA RAEEAACPWARLSVYRVPKSLRDGDERAYMPQVVSIGPLHRGRRRLREMERHKWRALH HVLKRTGHDVTAYLDALRPMEERARACYDGRVAGMQGNELVECLVLDGTFVLELFRGA QDGGKGFGDDLGYSRHDPIFAMRGAMHAIRNDMILLENQIPLFVLDLLLGLQLGNPEQ TGAVAGLAVRFFDPLMPTDEPLLRKDRSKLESSIGASPAAAAFEFDPLSGPMLHCLDV FRRSLLRAGLQPTPPPPARLWLKKWSGLRRVADKRRQQFVHCVSELREAGIRCRRRNT DRFWDIRFHDGVLQIPRILIHDGTKSLFLNLIAFEQCHMDIATPGGNNITSYAIFMDN LINSADDVKYLHDRGIIEHWLGSDAEVADLFNRLCQEVVFDINDSYLSGLSDQVNRYY DHKWSTWIASLKHNYFSNPWAIVSVVAGVLLLLLTMTQTFYGTYSYYRPMH</aaseq>

Gene Sequence

<dnaseqindica>145..1824#acattgcttgcctcgcctccctctcgagttggcttgctctctctgtcccggggccactgatcttggcaaccacgagacgctactgcggcgagccccacgccgccggcgaagccgctgcacctgccactgccagcctccatctcgatggtcgccgtcttcaacaaggacgtcctgagctggtacctgatcacggtcaagctcaaggagaccgtcgatgccaacctcaacaagtccgcgccgccgcccggcgcgctgccgctgtggcaggcgctgaaccgcaacctgccgctgctcaccaacggcgaggccgccggagcgggaggcgacgcgctgccgccgcgccaggagcgggagcgggaggtgaaggtccaggtgcagtcgccggcgcacagcccgaagccgcaggacccggaatgggtggtggccatccgcgggaagctggcgcaggcgcgcgccgaggaggcagcgtgcccgtgggcgcggctgtccgtgtaccgcgtgcccaagtcgctccgcgacggcgacgagcgcgcgtacatgccgcaggtggtgtccatcggcccgctccaccgcggccggcggcggctgcgggagatggagcggcacaagtggcgcgcgctgcaccacgtcctgaagcgcacggggcacgacgtcaccgcctacctcgacgcgctgcggccgatggaggagcgggcgcgcgcctgctacgacggccgcgtcgccgggatgcaggggaacgagctcgtcgagtgcctggtgctggacgggaccttcgtgctggagctcttccgcggcgcgcaggacggcgggaaggggttcggcgacgacctggggtactcgcggcacgaccccatcttcgccatgcgcggcgcgatgcacgccatccgcaacgacatgatcctgctcgagaaccagatacccctgttcgtgctcgacctcctgctcggcctccagctcggcaacccggagcagaccggcgccgtcgccggcctcgctgtgcgcttcttcgacccgctcatgccgaccgacgagccgctgctccgcaaggaccggtccaagctggagtcctccatcggcgcctcaccggcggcggcggcgttcgagttcgacccgctgtccggcccgatgctccattgcctcgacgtgttccggcgcagcctcctccgcgcggggctgcagcccaccccgccgccccccgcgcggctgtggctcaagaagtggtcggggctccggcgcgtggcggacaagcggcggcagcagttcgtccactgcgtgtcggagctccgggaggccggcatccggtgccggcggcggaacacggaccgcttctgggacatcaggttccacgacggcgtgctccagatcccgcgcatcctcatccacgacggcaccaagtccctcttcctcaacctgatcgcgttcgagcaatgccacatggacatcgccaccccgggcggcaacaacatcacctcctacgccatcttcatggacaacctcatcaactccgccgacgacgtcaagtacctccacgaccgcggcatcatcgagcactggctgggcagcgacgccgaggtggccgacctcttcaaccggctgtgccaggaggtggtgttcgacatcaacgacagctacctctcggggctctcggaccaggtgaacaggtactacgaccacaagtggagcacctggatcgccagcctcaagcacaactacttcagcaacccatgggcgatcgtctcggtggtcgccggtgtcttgttgctgctgctcaccatgacgcagaccttctacggcacctacagctactacaggccgatgcattgatccgcacaaaatgcaggggctcgaggcaatccaaaatttgatatttttattttttgggtttggcattgtgcgataggcatcaagtttagctgattttgtgacagcgtgagattgctggctttgcaattacagctttgatggggagaattcttccttggacttcggagtgcgttgtgtgggagagaaggatttgattagcaaatccttttgtcaaaaagttgcatgttgtgtacatttcaaaaacacagccacatacaaaggttaaaaagggttttttgcataggg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0505400, RefSeq:Os04g0505400