Os04g0508000

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Revision as of 11:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0508000| Description = Protein of unknown function DUF231, plant domain containing protein| Version = NM_001059802.1 GI:115459333 GeneID:433...")
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Gene Name

Os04g0508000

Description

Protein of unknown function DUF231, plant domain containing protein

Version

NM_001059802.1 GI:115459333 GeneID:4336351

Length

3230 bp

Definition

Oryza sativa Japonica Group Os04g0508000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25780257..25783486

Sequence Coding Region

25780517..25780859,25781155..25781313,25781425..25781621,25781710..25781902,25782152..25783395

Expression

GEO Profiles:Os04g0508000

Genome Context

<gbrowseImage1> name=NC_008397:25780257..25783486 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25780257..25783486 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggcgcgtggaggaaggcgtggctgtcgatgctggaccgaggcggcggatcaggcgcgggcggcggaggcggcgggagcagcgggtcgctgcacgtgcacctccacggcctcctctccccgtcctcgtcgtcgtcgtcgctcaacggttacaagcgcggcggcggtaagcacggcggcggtggtggttgcggcggcggccatgtgatgacgagtagcaaggccgtgctggcatgcttctccgtcgcgctcgtggtggccttcttctacgtctccgtcgccagcggccccaccgcggacgccgcctcgttcccttccccgacgggggcgtcgtcgtcgtcactcctgtcgtggctgtcgtcgaactcgacgtcggcggcggcgctgccgaggaggtctctcccgcctcacccgcccattcctcctgccggcggcggcgctgatctgcgtaacaccgcgcgtagaacgcagagcggcgccgagggctcggggttgccggcgccggcggcggagcaaacggccaaaccgcgggtttctgatctccggtcgggcgccgggaacgccaccgtcggtgacgtcgacggggatcaacgcgtcgggaatggcacgcgatcacgacagcagcgagaggaaaccgcaacaccaatgccgcgatggcagagaagggacgaggagaagaactccacccaccacgccatcgtcgccgctcccggcaactccaccgacgccccggccccaccactgaactcgacggcgacgccgcgagccgcagcagcagccgcagccacgccatcgacgccgccggagaggaaggctgacacccaccacagccatcggagaggcatcaggcacaagcagcagcagcatcaccagcacccgaggcggcgaaaggacaccgtcctcctcgcggcggcggcggcgcgccaagaagctcccgatcgccgcgacgacggcgccgccatgccattgcccgccgcgacgatcatcaacaccagcaccgtcggcgacaaccgcgtcgtctggacgtccggcgtgcagagtggcctggtctccttcgccaagtgcgacgtgttcagtggccgctgggtgcgcgatgacgacgagggcggcggcgcctacccgttctacccgccgggctcgtgcccccacatcgacgacgacttcaactgccacaagaacggccgcgccgacaccggcttcctcaggtggaggtggcagccgcacggctgcgacatccccaggctgaacccgattgattttctggagaggctgagagggcagaggatcatattcgtcggcgactcactgaaccgcaacatgtgggagtctctggtgtgcattctgcggcatggtgtcagggacaagaggaggatgtatgaagcgtcagggaggaaccagttcaagaccaggggatactactccttcagattcagggattacaattgctccgtggatttcataagatcaatatttctagtcaaggagatgatcaacgagaccaaaggcggcgccgtggtggacgctaagttgagattggatgaactcgatgaaacgactccggcgtaccggactgccgacatcgtcgtcttcaacaccggccactggtggacgcactggaaaacatcaagagggctgaattactaccaagaaggtaactacgtgcaccccagcctcgaggtgatggacgcatacaagagagctctgaccacctgggctagatgggtcgacaagaacatcgactccacaagaactcaggtggtgttcagaggatactccctcacacatttcaggggagggcagtggaactcaggagggagatgccacagggagacggagccgatcttcaaccggacgcacctcgccgagtacccggagaagatgaggatcctggagcaggtgctggggcggatgaggacgccggtgatctacctcaacatcagcgccatgacggactaccgcaaggacgcccacccgtcggtgtaccgggtgcggtacgagacggaggaggagcggatggcggcggtggcgaagcaggactgcagccactggtgcctgcccggcgtgccggattcctggaacgagctgctgtacgcctcgctgctccaggcagggagaggatcgtggagactatga</cdnaseq>

Protein Sequence

<aaseq>MAGAWRKAWLSMLDRGGGSGAGGGGGGSSGSLHVHLHGLLSPSS SSSSLNGYKRGGGKHGGGGGCGGGHVMTSSKAVLACFSVALVVAFFYVSVASGPTADA ASFPSPTGASSSSLLSWLSSNSTSAAALPRRSLPPHPPIPPAGGGADLRNTARRTQSG AEGSGLPAPAAEQTAKPRVSDLRSGAGNATVGDVDGDQRVGNGTRSRQQREETATPMP RWQRRDEEKNSTHHAIVAAPGNSTDAPAPPLNSTATPRAAAAAAATPSTPPERKADTH HSHRRGIRHKQQQHHQHPRRRKDTVLLAAAAARQEAPDRRDDGAAMPLPAATIINTST VGDNRVVWTSGVQSGLVSFAKCDVFSGRWVRDDDEGGGAYPFYPPGSCPHIDDDFNCH KNGRADTGFLRWRWQPHGCDIPRLNPIDFLERLRGQRIIFVGDSLNRNMWESLVCILR HGVRDKRRMYEASGRNQFKTRGYYSFRFRDYNCSVDFIRSIFLVKEMINETKGGAVVD AKLRLDELDETTPAYRTADIVVFNTGHWWTHWKTSRGLNYYQEGNYVHPSLEVMDAYK RALTTWARWVDKNIDSTRTQVVFRGYSLTHFRGGQWNSGGRCHRETEPIFNRTHLAEY PEKMRILEQVLGRMRTPVIYLNISAMTDYRKDAHPSVYRVRYETEEERMAAVAKQDCS HWCLPGVPDSWNELLYASLLQAGRGSWRL</aaseq>

Gene Sequence

<dnaseqindica>2628..2970#2174..2332#1866..2062#1585..1777#92..1335#gctcgcttcactccccagcaagttgcggcggcggcgcgcggctagccggacacaccgatcacgctgactagctagtactagtagctattgaatggccggcgcgtggaggaaggcgtggctgtcgatgctggaccgaggcggcggatcaggcgcgggcggcggaggcggcgggagcagcgggtcgctgcacgtgcacctccacggcctcctctccccgtcctcgtcgtcgtcgtcgctcaacggttacaagcgcggcggcggtaagcacggcggcggtggtggttgcggcggcggccatgtgatgacgagtagcaaggccgtgctggcatgcttctccgtcgcgctcgtggtggccttcttctacgtctccgtcgccagcggccccaccgcggacgccgcctcgttcccttccccgacgggggcgtcgtcgtcgtcactcctgtcgtggctgtcgtcgaactcgacgtcggcggcggcgctgccgaggaggtctctcccgcctcacccgcccattcctcctgccggcggcggcgctgatctgcgtaacaccgcgcgtagaacgcagagcggcgccgagggctcggggttgccggcgccggcggcggagcaaacggccaaaccgcgggtttctgatctccggtcgggcgccgggaacgccaccgtcggtgacgtcgacggggatcaacgcgtcgggaatggcacgcgatcacgacagcagcgagaggaaaccgcaacaccaatgccgcgatggcagagaagggacgaggagaagaactccacccaccacgccatcgtcgccgctcccggcaactccaccgacgccccggccccaccactgaactcgacggcgacgccgcgagccgcagcagcagccgcagccacgccatcgacgccgccggagaggaaggctgacacccaccacagccatcggagaggcatcaggcacaagcagcagcagcatcaccagcacccgaggcggcgaaaggacaccgtcctcctcgcggcggcggcggcgcgccaagaagctcccgatcgccgcgacgacggcgccgccatgccattgcccgccgcgacgatcatcaacaccagcaccgtcggcgacaaccgcgtcgtctggacgtccggcgtgcagagtggcctggtctccttcgccaagtgcgacgtgttcagtggccgctgggtgcgcgatgacgacgagggcggcggcgcctacccgttctacccgccgggctcgtgcccccacatcgacgacgacttcaactgccacaagaacggccgcgccgacaccggcttcctcaggtggaggtggcagccgcacggctgcgacatccccaggtgagcccaacaacctcagctcctgtgaacttcccagtaactccaagagaaccggaggtcagtgggacccacatgtcagcgaccatgtctttctgacgttacgttgcgtaacgttagaggatcttgttccgtcacgtacactgtaatatgcacgcgacacctttctgaattcgcttcggaattataaaaatttcaagatcatttcgagtgcatttgtgatcgaagcttaattctcttctgcttcatcaggctgaacccgattgattttctggagaggctgagagggcagaggatcatattcgtcggcgactcactgaaccgcaacatgtgggagtctctggtgtgcattctgcggcatggtgtcagggacaagaggaggatgtatgaagcgtcagggaggaaccagttcaagaccaggggatactactccttcagattcagggtacacagctaggctggctcactgaacaacactagctctgaattttgtcaacatttgtatctcatggctaatttcactgcacttgtaggattacaattgctccgtggatttcataagatcaatatttctagtcaaggagatgatcaacgagaccaaaggcggcgccgtggtggacgctaagttgagattggatgaactcgatgaaacgactccggcgtaccggactgccgacatcgtcgtcttcaacaccggccactggtggacgcactggaaaacatcaagagggtatatcacaccgttctccaaactgaacttccacatgaaactttacacaaaatctgtcatttcaccctctcctgccaaaccattgatcaaacgttgttcttgtctccacaggctgaattactaccaagaaggtaactacgtgcaccccagcctcgaggtgatggacgcatacaagagagctctgaccacctgggctagatgggtcgacaagaacatcgactccacaagaactcaggtggtgttcagaggatactccctcacacatttcaggtaagagatcgaatcacacatctccgtcgcaccatccgatcatcaccagggttcaatctttcgttttcagtgtttgtatcagagggtgtcgatataccgaaattttagaaaattcagttgtatcagaccccgatatgatattatttcagccaaaatatttaaagtttttcatgtttttttggtgaatttggtaatattttgtccaaattttgttccggaattttgaactctaatcatcacacggcgtattcttcttctcctccatctcatctgatgatccatcttcaccttccaggggagggcagtggaactcaggagggagatgccacagggagacggagccgatcttcaaccggacgcacctcgccgagtacccggagaagatgaggatcctggagcaggtgctggggcggatgaggacgccggtgatctacctcaacatcagcgccatgacggactaccgcaaggacgcccacccgtcggtgtaccgggtgcggtacgagacggaggaggagcggatggcggcggtggcgaagcaggactgcagccactggtgcctgcccggcgtgccggattcctggaacgagctgctgtacgcctcgctgctccaggcagggagaggatcgtggagactatgagaagttgatttctcaaaatctcttgacagttgacacacaaggcacaggcgaaaaaaaaaagatgagtggtaacatggttcatgttagaggtgcacataaacacaggaaaatcctgcagtgagtagatcaggtagaagcagattaatcgttaataagatgatgaggttttaattctttcctcccggtagttcatgtacatatgagagcttaataactgatgtaccatctgaagaatatcatcacatattcatatcgaaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0508000, RefSeq:Os04g0508000