Os04g0508900

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Revision as of 11:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0508900| Description = Ssl1-like domain containing protein| Version = NM_001059809.2 GI:297603025 GeneID:4336358| Length = 3609 bp| Defini...")
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Gene Name

Os04g0508900

Description

Ssl1-like domain containing protein

Version

NM_001059809.2 GI:297603025 GeneID:4336358

Length

3609 bp

Definition

Oryza sativa Japonica Group Os04g0508900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25833870..25837478

Sequence Coding Region

25835134..25835655

Expression

GEO Profiles:Os04g0508900

Genome Context

<gbrowseImage1> name=NC_008397:25833870..25837478 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25833870..25837478 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcagcttcagagatggattatcgacctagtcgaatggctgttgttgcaaaatatgctgaggtattcataagggaattttttgaccagaatcccttgagtcatgtggggatagtgacaatgaaagatgggatttcccatcgacttacagagattggaggtagtcctgaatcacagattaaagcattgatggggaagcttgagtgttctggtgaaccatctctgcagaatgctctagagcttgtccatggttatttagaccaggttccttcatatggtcacaaggaagtattatttttgtactcggccctgaatacctgtgatcctggagatatcatggagacaatagcaaaatgcaagaaatccaaaatacgatgttcggttattgggcttgctgcagagatttttatctgcaaatatctgtgtgaagagactggcggatcctacacagttgcactggatgaggtcttaaaatatgctttgtgtgtttacctttccttattcagttattgtgaagataaataa</cdnaseq>

Protein Sequence

<aaseq>AASEMDYRPSRMAVVAKYAEVFIREFFDQNPLSHVGIVTMKDGI SHRLTEIGGSPESQIKALMGKLECSGEPSLQNALELVHGYLDQVPSYGHKEVLFLYSA LNTCDPGDIMETIAKCKKSKIRCSVIGLAAEIFICKYLCEETGGSYTVALDEVLKYAL CVYLSLFSYCEDK</aaseq>

Gene Sequence

<dnaseqindica>1824..2345#atctccccggtccccgacctcgcctctccttcctcctctgctcccactccgcctcgccgccgcctccaccatgtacggcgtcggcggcggcggcggggggttcaacgcgccctacacggcatcggcccggcggcgcaaccacgaggacgacgacgacgaggaggaggaggagtccggcgaggggcgcgtcctcgaggcctgggagcgcgcgtacgcggacgaccggtcatgggaggcgctgcaggaggacgagtcgggcctcctccgcccgatcgacaccaagaccctcgtccacgcgcagtaccgccgccgccttctcctccgctctgccgcctccgccgccgcccgcatccagaagggcctcatccgctacctctacatcgtcatcgatctctcccgggttcgttcccccgtgccttctcctaagcttgtcctcgggtcagtcactccgtcgagcacttggtgagtgcggagttttccgtgagctcgggttaggatcactggggatggcgggcaatgctgatcgtgctaacctctcagtgtttgttaaatgcaacacctcgtgccgaggctgatctggtggtattgcccatggcctcaatttggttcgtgtgaaatgtggactggaggcagtattgttgaatcggtgatcactatgtagtgcttttagcttgatttcatatgctagctatttcagtgactagctgcgcaatcctctccacttccacatcaaggtttgatgtttgagttgatgatctcatcactcatgtatgatttgctagcttgtcttcttgcttaggtgttctgcttttagtccctgagagtgggtgttataatcggtgcatatcagggcaatactggaatctagccatttttgtttgccattgaccagggccataaccagagattgaatggggggttttcgccaaccattgaacgcaatgaagttcacaaactaaaatgaaattgtatatggtttgtattaaaaatggttcttctacaattataatagtttgttttgtaaaggaaaaaaattcttgtgccaaagggtctcctgagatctgtggtaaataaaattctttctataaattactgcactatgactcttatgagcaagctaaaaaggaaaagacatatttcataccccatccctgttaggctcatgctaatagcaattttctcttggttctgtcctatctgaaaacttcataggaatcggaggagcgtgaggtttttcattatcaagattctgaagcggtaaagcgttttggttgatcgtcatttgttttatgtcaaaggaaaggggcaccgtactgcattactgctccataccatttgacattgttggaaagtgttttctgttgatttgagaacactacgtatattttgtgtatgcattcatgtggaaaaagccctttcttcctttgggtgataggtagtaaataagatcctctttggcacagctccagatcttagatccatggtagatttgaagtttataaattaaattataatggtttaaaattctaaatttcatttgaaatgtgcacgaaataatttatttaaatgttattaacgtaatcgtagatctagatccatggatttatggagctagaaatacctagctccaagaaatcttggagagggcctataccatttattttagcatatgtacattttcttctcacaaagtaggctgctcatgattgttctggtgatgaagatatttttactgcaaattgatatgctgcccacgacttcttttacttctttgcattcggttgtaatctccatttatcctggttgtatctttgatcatgtaggcagcttcagagatggattatcgacctagtcgaatggctgttgttgcaaaatatgctgaggtattcataagggaattttttgaccagaatcccttgagtcatgtggggatagtgacaatgaaagatgggatttcccatcgacttacagagattggaggtagtcctgaatcacagattaaagcattgatggggaagcttgagtgttctggtgaaccatctctgcagaatgctctagagcttgtccatggttatttagaccaggttccttcatatggtcacaaggaagtattatttttgtactcggccctgaatacctgtgatcctggagatatcatggagacaatagcaaaatgcaagaaatccaaaatacgatgttcggttattgggcttgctgcagagatttttatctgcaaatatctgtgtgaagagactggcggatcctacacagttgcactggatgaggtcttaaaatatgctttgtgtgtttacctttccttattcagttattgtgaagataaataatgcctgttttattttggcagtcccatttcaaggaattgcttctggaacatgctcctccaccacctgcaattgctgagtatgctgcagctaatttgattaagatgggttttccgcagagaggagcagaggatcttatctccatctgctcttgtcacaagaaaataaagtcgggggctgaaggttacatatgtcctagatgcaaagtcaatgtatgtgagcttccaacagaatgtcgaacttgcgggctgacactagttagctctccacatctggcaaggtcctatcatcatctcttccctgtacaaccatttgatgaggtgtcctccgtgcacccaaatagactaggtcaaaagggaggacaaaagtgttacggctgccagcaaagctttattaaccctggtatgcagttctttaacacgtctaacagtacatgctaccttttcaatgcattttcatacaaggaaagatatccttattgtgctacatatgttgcagttggtagaaaaaagaagagaaaatacataatacaaagcttacatttgtttgttattacatggcatcatgttcttcaattaccaatcctcatacttctcttacatttaatgtttttcactggtttttgtgctagattatactccctctgtcccataaaaaaccaacatagtactagatgtggcatatcctagtactatgaatctggacatacctctgtttatattcgttgtactagaatgtgttatatacagtcctaggttcgttattttttgagacggagggagtactttgcaattatcaggtttattaattatttatccaatatccttgcagatagtcaatctagcctccatgttcgctgtccaaaatgcaaccaacacttctgccttgattgcgatatttacatccatgagagcttgcacaattgcccaggttgcgagagtcagcgtagttcttcatagggatgccattgtggtgttaatctttgtctttttaactcaagaagctacccgttgctgtaagctttctcgtacactgacattggtaggcgatgttgtgaggtaatcaaacagtgtacagatgatatagtgcccggcctccattttgttgacgcttcctgttcatttagatggagtagctagttaagctattttgatacagagtactggtcaaagagttgttgaagccatagcattgttgctgaggggaggtgttagaaatgtacaatgcgactgaaaagtgaaaacttgtaactcttgccgtttttctg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0508900, RefSeq:Os04g0508900