Os04g0510200

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Revision as of 11:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0510200| Description = Similar to STYLOSA protein| Version = NM_001059819.1 GI:115459367 GeneID:4336368| Length = 4443 bp| Definition = Or...")
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Gene Name

Os04g0510200

Description

Similar to STYLOSA protein

Version

NM_001059819.1 GI:115459367 GeneID:4336368

Length

4443 bp

Definition

Oryza sativa Japonica Group Os04g0510200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25925213..25929655

Sequence Coding Region

25925685..25925716,25925804..25925901,25927913..25928022,25928105..25928400,25928506..25928581
,25928684..25928795,25929062..25929111,25929197..25929499,25929583..25929655

Expression

GEO Profiles:Os04g0510200

Genome Context

<gbrowseImage1> name=NC_008397:25925213..25929655 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25925213..25929655 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcagagcaactgggaagcggataagatgcttgatgtgtatatctatgactatttgctgaagcggaatttgcaggcgacggccaagtcgttcatggcggaggggaaggtctccgccgatccagttgcaattgatgctcctggagggtttctctttgagtggtggtctgttttttgggatatatttattgcaagaactaacgagaagcattctgagatcgcagcagcatacctagaggcacagcaaacaaaagcaagagagcatcaacagcagatgcaaatgcaacagttgcagctaatacaacaaagacatgctcaactgcagcgaactaatgccactcatccttcacttaatggtccaataagtggcctaaactctgatggcattctgggaccatctacggctagtgttttagctgccaagatgtatgaagagcgcttaaagcactctcatcccatggactctgatgggtcacagcttcttgatgctagtaggttggctcttctcaagtcggcgtcaacaaatcactcagggcaatcagtacctgggactcctggaagtgtgtctacgacgcttcaacaaatccaagctcggaatcagcaaaatattgatataaaaagtgaaggtaacatgagtgtagcacaaagatctatgcccatggacccatcatcattatatggtcagggaataatccagccaaagcctggattgggtggtggagttttaaaccaaggagtgagtggtctaccattgaagggctggccgctaactggaattgaccaactgcggccaaatttaggtggtcaaatgcagaagccatttctttcaacacagtcgcagtttcaacttatgtcgccacagcagcagcagcaattcttagcacaagcccaagcacagggaaatcttggcaactctaccaatttaggggatatggatccccgaagattgtcagcgctaaccaggagcgtgttgaatggtaaagatggacaacctgctggaactgatgggtgcattacttccccaatgcaatccagttcacccaaagtcagaccagaccaagaatatctcatgaagacatcttctcagcaaacacaggaacaacttcagcagcagcataatcagcaacagcaacagcaaacacaacagg</cdnaseq>

Protein Sequence

<aaseq>MAQSNWEADKMLDVYIYDYLLKRNLQATAKSFMAEGKVSADPVA IDAPGGFLFEWWSVFWDIFIARTNEKHSEIAAAYLEAQQTKAREHQQQMQMQQLQLIQ QRHAQLQRTNATHPSLNGPISGLNSDGILGPSTASVLAAKMYEERLKHSHPMDSDGSQ LLDASRLALLKSASTNHSGQSVPGTPGSVSTTLQQIQARNQQNIDIKSEGNMSVAQRS MPMDPSSLYGQGIIQPKPGLGGGVLNQGVSGLPLKGWPLTGIDQLRPNLGGQMQKPFL STQSQFQLMSPQQQQQFLAQAQAQGNLGNSTNLGDMDPRRLSALTRSVLNGKDGQPAG TDGCITSPMQSSSPKVRPDQEYLMKTSSQQTQEQLQQQHNQQQQQQTQQ</aaseq>

Gene Sequence

<dnaseqindica>473..504#592..689#2701..2810#2893..3188#3294..3369#3472..3583#3850..3899#3985..4287#4371..4443#accgtctcttcccccccctcccttcccttcccttccctcccctttctctctccttcccgatctctctctctctctctctcctcgagctctcgccgcacgctcccaaaagcggcgccgcgccgagctcgagctcgagctcgcggcgggcgacgagctccggcgagcgcgcgcgcgcacgctgaccagcgggggtttccccgtccgagctcgcgcgggcgtcgtctcgtcgggcccccttttcacctttctatcggtcattgaggggtgttctctctccccccaggccaccgcttcgcctggccgctcgggcgctcgccgcggattttcctggcccgccgagtggcgggatcgcggccaaccggtaatgtgggctctgatccctacgttctgctgtgaattaggactgattgtgctggctatggtgctgatttgtgtcgtgtttggttcggtttgctcggggttgtgcagcggaatggcgcagagcaactgggaagcggataagatgtaggcgatttctctgtcttttggtgcctggtttctgcggattttttgttgttgtgttaggattaatttccggtgcttgtcgtgcaggcttgatgtgtatatctatgactatttgctgaagcggaatttgcaggcgacggccaagtcgttcatggcggaggggaaggtctccgccgatccagttggtattcatctccgctgcttctgtagccgcctccttttggggttcccctttggtttttgccttgctagcttttgatagcaaatggagtttgtgaccacaggaaaattctggattttaagtagaggggcaggtttccatttttattttatttttttgagatggcaggtttcgagcattagtaggaacgaaaatttgggtttcgatctggaatgggagtcttgtgccatgaaatttgaaatcttcacacaggggttgtttctgatcaaatcagaacagaaaatttggaacgtggaagtatttgggagactttttcttccttcaaaatttaagaagaggtgctcacggttagagcttcgagctaatgcagggtatagctttcgatgtttgggggaaaagtaacttggagaatggagacgcttggtgttcggttcacttgggtgtctagctttcgtggttttcattcagctagtcatgtgctacttccattttttaatatatgacgcatttaacttttgtgattcgtttggctattcatcttttctagaaatatctgtgcatataggcaaacatacaatgcatgatagttgtgtacatccactttggatgtagaggcctggttttttattttctttcttaaaaaaacatacaacgcacgcttaagtacttttgatggcagatctagtggtactcttttcactttaactaagtaactgaataaatattgtaggtaaaatttgaaggaaataatgaatcatgttatatattaaaaatggaggtagtaaataatagtttcaacaactatcttattgagtggatggcgggattgggcggcttgctttggacattcatgcatgcttgtagacaacattggattttgatggtggagtacagatgtattaaaagcagaaaccgcatagatctttttagttgtggctcttttcatatatctatcataatgtaattgacatatatagccagaaatgatctattaatggtatttagctaacttagctattgttcagccatttctttcagcactcgatgaactgaattatgtcaaattgtcagctgtgttcaaataagaatagatgcatacatttagaaaagttgtaaagggttttgagttttggtagtaaaactccagatgtatagtagaacaggatgcttaactttctagaaactactgttttgttctgtgacatgagaaataataattgatacagagtacattatattttgtggccctaaggagccctaacatggataggaatacatgtgcatagtgggaccagaactacagaacaaagtaatactaatacaatttgcatatttctcacacatgtagtaggtagttctagactactagtactatacagtcaacaactgatacagtgccaaactagggagctgaactaaacttagaaaataaagagaaaaactttgcttttgcccttttagttccaaatacacgtctcgctaagaccaggcctgttagaaaagggctagcttcatctttcacgcattactcaaaatgataattcattaatttgtcacctttgaaccctccatgatgtttgaccctagttgcttttcccagcttaaatggttcagttctgtcacataaaaaacagcatgcgatttacaaaaatctttaaatcctcatgaaacgtaccatcacctttaattccaaataaacttctcacttactaaaattggcatgtgagaaaagggttaggtagtatgtttttgttttgctaggttcttcagatgtgataactaccacatctgaaccttccaattcaactttggcatgtggatatcttcaaagatgccaaaaaccctaggtgatgataatatatttaatgcaaaacacctagaactaataattcaatatagatttgtgtcactccaagaacttatgcatgctgtttacctgtgacccatttactacattagtttcaattcataggagattcattcaagcatcataattgtaaattcttgtattgcagcaattgatgctcctggagggtttctctttgagtggtggtctgttttttgggatatatttattgcaagaactaacgagaagcattctgagatcgcagcagcatacctagaggtacctttggaattgtaaatttttaatcaccatgcatgtcttttttagcttgtccaatgtaaatttccttttggaaatataggcacagcaaacaaaagcaagagagcatcaacagcagatgcaaatgcaacagttgcagctaatacaacaaagacatgctcaactgcagcgaactaatgccactcatccttcacttaatggtccaataagtggcctaaactctgatggcattctgggaccatctacggctagtgttttagctgccaagatgtatgaagagcgcttaaagcactctcatcccatggactctgatgggtcacagcttcttgatgctagtaggttggctcttctcaagtcggcgtcaacaaatcactcagggtaatcctccatgtcatttttttctgatatgtgaaagcaaaattgaagaaattgaatttgatgtgctatcagcattctcactatttgtatattttatggaaataggcaatcagtacctgggactcctggaagtgtgtctacgacgcttcaacaaatccaagctcggaatcagcaaaatattgtgggtttattggttaatttatgctgtgtattttaagttcactactttgtccattagtccattaaatgtatacaatgatgacccaaatatcatctctaacaggatataaaaagtgaaggtaacatgagtgtagcacaaagatctatgcccatggacccatcatcattatatggtcagggaataatccagccaaagcctggattgggtggtggaggtcagcccattcctctctgtatataagttcgcttttgttgctaaagtagcactctgaaataaatgcagtgaacgtggaacttatatactacatcgatttatatgttgtttctgtggtgactatattgtgggcatattctgaaacattaaaagcaaatgctattgttctcaagggagaaaaatatcctattcttgctttgtccattctgattttgttgagaaatctctttgctgctaaatgattgagattcatttttctgttaacagttttaaaccaaggagtgagtggtctaccattgaagggctggccgctaactgtaagcttcatgaatataaattgcctcatctgttcatgcatttattttggatctactgattaatattggtgctatcatcttacagggaattgaccaactgcggccaaatttaggtggtcaaatgcagaagccatttctttcaacacagtcgcagtttcaacttatgtcgccacagcagcagcagcaattcttagcacaagcccaagcacagggaaatcttggcaactctaccaatttaggggatatggatccccgaagattgtcagcgctaaccaggagcgtgttgaatggtaaagatggacaacctgctggaactgatgggtgcattacttccccaatgcaatccagttcacccaaagtcagaccagaccaagaatatctcatgaaggttggtttttcttctggaagtgtgctgcttctttgttttgcaaaaaaatctagttatacctaaaaggtacccacatgcagcagacatcttctcagcaaacacaggaacaacttcagcagcagcataatcagcaacagcaacagcaaacacaacagg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0510200, RefSeq:Os04g0510200