Os04g0511400

From RiceWiki
Revision as of 11:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0511400| Description = Sugar transporter family protein| Version = NM_001059827.1 GI:115459383 GeneID:4336377| Length = 3601 bp| Definitio...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0511400

Description

Sugar transporter family protein

Version

NM_001059827.1 GI:115459383 GeneID:4336377

Length

3601 bp

Definition

Oryza sativa Japonica Group Os04g0511400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25966267..25969867

Sequence Coding Region

25966463..25966957,25967041..25967643,25967838..25967945,25968033..25968368,25968499..25968569
,25968800..25968932

Expression

GEO Profiles:Os04g0511400

Genome Context

<gbrowseImage1> name=NC_008397:25966267..25969867 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25966267..25969867 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagggggtgcaactctagctgataaggctgaatttaaggaatgtctgcggctgacctggagccagccttacattcttcagcttgttttctctgccggcatcggtggtcttcttttcggatatgatacaggtgtcatatctggagcacttctgtatattcgagatgattttactgcggtcgaaaagagcactgtacttagggaaacgatagtgagtatggctgtagctggagccatagttggagcaggatttggtggctggatgaacgacaagtttggaaggaagccttccatcttgatcgccgattccctgttcctcgcaggtgccttgatcatggcccttgccccaacaccgtttgtcatcattattgggaggatctttgttggtcttggggttggaatggcttccatgacagcacctttgtacatttctgaagcctctccagctagaatcagaggtgcacttgtgagcacaaatggacttcttattaccggagggcagttcatggcatacctcattaatctggccttcactaaggtaaagggaacatggaggtggatgcttggcattgcaggtcttcctgcttttattcagttcatattgatgtgtatgctacctgaatcaccaaggtggctatacagacaggataggaaagaggaggctgaagccatattaaggaagatttaccccgcggctgaggttgaagaagagatcgattcgatgcgccgatcaattgaacatgagaaacaactggagggctccatcggcgagcagagtctggttggcaagctgacgaaggcactgagcagcaaggtcgtccgccgtgggctcatggccggcgtcatcgcgcaggtcgcccagcagttcgtcggcatcaacaccgtcatgtactacagcccgacgatcgtccagctggccggcttcgcgtcgaacaacacggccatggcgctgtccctcatcacctcgggcctcaacgccatcgggtccatcgtcagcatgttcttcgtggacagggccggccgccgtcgcctgatgatcatcagcctcgtcggcatcgtcctgtggctcgccgtgctcggcggcacgttcctcggcgccgcgcaccacgcgccgccggtcagcgacctggagacgcgggtgttcgccaaccagacgtgcccggagtacagcccgagcgcccgctggaactgcatgaactgcctcaaggcccagtccacctgcggcttctgcgcccacggaggaaacaagctcctccccggcgcgtgcctggcggcgggcgaagcgtcgcggcggacgtgccacgcggggaaccgggagttctacacggaagggtgccccaacaacttcgggtggctggcgctggtggcgctcggcgcgtacatcgtctcctactccccgggcatgggcaccgtgccatggatcgtcaactcggagatctacccgctgcggttcaggggcgtctgcggcggcatcgcggcggtggccaactgggtgtccaacctcatcgtcacgcagacgttcctgagcctcaccaaggcgctgggcacgtcggccaccttcttcctcttctgcgccgtctccttcttcgcgctcgtcgtcgtcttcttcaccgtgccggagaccaagggactgcagttcgaggaggtggagaagatgctcggggagaaggactacaagccgtggaagagataccgtcccgacgtgtcgtccaaagggcgcgacatcggcctctctgttccatga</cdnaseq>

Protein Sequence

<aaseq>MEGGATLADKAEFKECLRLTWSQPYILQLVFSAGIGGLLFGYDT GVISGALLYIRDDFTAVEKSTVLRETIVSMAVAGAIVGAGFGGWMNDKFGRKPSILIA DSLFLAGALIMALAPTPFVIIIGRIFVGLGVGMASMTAPLYISEASPARIRGALVSTN GLLITGGQFMAYLINLAFTKVKGTWRWMLGIAGLPAFIQFILMCMLPESPRWLYRQDR KEEAEAILRKIYPAAEVEEEIDSMRRSIEHEKQLEGSIGEQSLVGKLTKALSSKVVRR GLMAGVIAQVAQQFVGINTVMYYSPTIVQLAGFASNNTAMALSLITSGLNAIGSIVSM FFVDRAGRRRLMIISLVGIVLWLAVLGGTFLGAAHHAPPVSDLETRVFANQTCPEYSP SARWNCMNCLKAQSTCGFCAHGGNKLLPGACLAAGEASRRTCHAGNREFYTEGCPNNF GWLALVALGAYIVSYSPGMGTVPWIVNSEIYPLRFRGVCGGIAAVANWVSNLIVTQTF LSLTKALGTSATFFLFCAVSFFALVVVFFTVPETKGLQFEEVEKMLGEKDYKPWKRYR PDVSSKGRDIGLSVP</aaseq>

Gene Sequence

<dnaseqindica>2911..3405#2225..2827#1923..2030#1500..1835#1299..1369#936..1068#tttgctcgtcgtccgtggtggaggcgcggtggggtggggaaggagtgtgtttcgtgtgctgtgctgggctcgcgcggctctcgtcccgggctcccggcagcctggggtttctctccccgtttctgtttctcggtgaggtgaagttttccgtctcagcacactgccagttcttcttcttgttcttcctactcgtggcgccgcggcgtcctcacggatcgcaaggtcgggaattatctggggttctcggggtttgtggctcctttccggtgaaaggattcttttttagcgggagatcggttgagtcggtttcttctgtagatcttatcgttgagatttcgttgtttatgttaggcgagtcggggtgagacttatccgcgttcctccctgcgatgaaacacgcgattttggattgtcgttacgtttagggattgtggttttaaggctgttcttccgttgtaaatgttggttgcgccatcctataaaagaaagggactcctgtcgagaaacacaccatgcttcttctgtcctgaaggtttggaaaggcacattctgaggagatttttctgtcctacatcgtaggtatcgagattcatctctatcttccctgattttataatcgattgatgccgctcacagttttatatgatgtgatccaaacaagtatagcaatcatgatgtttgaaacagtgaaccatcattcgtattatgaaacttctgttactgaacagaataaatagtttgctgggtttcttaatctatggcacttcttcgttgttgcgattcatagtattattataggtcctacattgacaaatcttctatttaattctgtagcattttaattctgtgtaataatacaggacaatttatgtttcattcctgcgtgaccaatctaatctgaacctacgttgggtgcgcaaaagcccttgaatgcaatggaagggggtgcaactctagctgataaggctgaatttaaggaatgtctgcggctgacctggagccagccttacattcttcagcttgttttctctgccggcatcggtggtcttcttttcggatatgatacaggtactgttacatggcataggctacaacaaaaataatttactgaattttgtcaaagttcaagttttgctattatgtccttttcaattgtccatttatttactttttaagtatctctgtagtctattaagtatcataatgttgtttatgtttccaaacatttagctccactttggaaatgcaacacagatgacaaatttcgattctttttaattaatctactgttttgctaggtgtcatatctggagcacttctgtatattcgagatgattttactgcggtcgaaaagagcactgtacttagggtacatttggcttctcctgattctcactttgatttaacttttcactttccgtagtacaactgcttttcttcagaatacagcattccgtgttgacaaaatctgatgggatttgccctgatctgaaatgcaggaaacgatagtgagtatggctgtagctggagccatagttggagcaggatttggtggctggatgaacgacaagtttggaaggaagccttccatcttgatcgccgattccctgttcctcgcaggtgccttgatcatggcccttgccccaacaccgtttgtcatcattattgggaggatctttgttggtcttggggttggaatggcttccatgacagcacctttgtacatttctgaagcctctccagctagaatcagaggtgcacttgtgagcacaaatggacttcttattaccggagggcagttcatggcatacctcattaatctggccttcactaaggttactcacctgtgtacactgaaagctcgtgctgtaccatgtctttttcaaggtgcagcagtaatcatatctcaatgactctgtcaggtaaagggaacatggaggtggatgcttggcattgcaggtcttcctgcttttattcagttcatattgatgtgtatgctacctgaatcaccaaggtggctatacagacaggtcagtatttatgtacagatgctttgcttaaagaaaaaaaaatgtacatacgtgtttagttcattgttacatggaaacgtagatgtacaagggaagtacattgttacatatgcacaaatcacaagtaaattttgtagcaaatttgactctgtcaagctaaaagattgtgctggaaattactgaattctgcacaggataggaaagaggaggctgaagccatattaaggaagatttaccccgcggctgaggttgaagaagagatcgattcgatgcgccgatcaattgaacatgagaaacaactggagggctccatcggcgagcagagtctggttggcaagctgacgaaggcactgagcagcaaggtcgtccgccgtgggctcatggccggcgtcatcgcgcaggtcgcccagcagttcgtcggcatcaacaccgtcatgtactacagcccgacgatcgtccagctggccggcttcgcgtcgaacaacacggccatggcgctgtccctcatcacctcgggcctcaacgccatcgggtccatcgtcagcatgttcttcgtggacagggccggccgccgtcgcctgatgatcatcagcctcgtcggcatcgtcctgtggctcgccgtgctcggcggcacgttcctcggcgccgcgcaccacgcgccgccggtcagcgacctggagacgcgggtgttcgccaaccagacgtgcccggagtacagcccgagcgcccgctggaactgcatgaactgcctcaaggcccagtccacctgcggcttctgcgcccacggaggaaacaaggtactaacattcttgtctcttgatgttgttcttgctgttcttgccattgatatgagaagtgagctttctggacgatcgagcagctcctccccggcgcgtgcctggcggcgggcgaagcgtcgcggcggacgtgccacgcggggaaccgggagttctacacggaagggtgccccaacaacttcgggtggctggcgctggtggcgctcggcgcgtacatcgtctcctactccccgggcatgggcaccgtgccatggatcgtcaactcggagatctacccgctgcggttcaggggcgtctgcggcggcatcgcggcggtggccaactgggtgtccaacctcatcgtcacgcagacgttcctgagcctcaccaaggcgctgggcacgtcggccaccttcttcctcttctgcgccgtctccttcttcgcgctcgtcgtcgtcttcttcaccgtgccggagaccaagggactgcagttcgaggaggtggagaagatgctcggggagaaggactacaagccgtggaagagataccgtcccgacgtgtcgtccaaagggcgcgacatcggcctctctgttccatgaaaggaagaagaacagtgtttggtttcaagttatttgggttttaactagcaataatctgtactcagtttacatgtagagtggccgttgccaatagaaattaatcagttgtttcattgtgtgacacattttagagccttttcccctgtgcttagaacgtttgatgatttttatataagtaaattgcgtcttggtcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0511400, RefSeq:Os04g0511400