Os10g0116900

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Revision as of 08:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0116900| Description = Conserved hypothetical protein| Version = NM_001070590.1 GI:115480923 GeneID:4347990| Length = 4274 bp| Definition ...")
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Gene Name

Os10g0116900

Description

Conserved hypothetical protein

Version

NM_001070590.1 GI:115480923 GeneID:4347990

Length

4274 bp

Definition

Oryza sativa Japonica Group Os10g0116900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:1064246..1068519

Sequence Coding Region

1064650..1065379,1065796..1065950,1066029..1066141,1066238..1066345,1066773..1066890
,1066996..1067069,1067595..1067690,1068062..1068455

Expression

GEO Profiles:Os10g0116900

Genome Context

<gbrowseImage1> name=NC_008403:1064246..1068519 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:1064246..1068519 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcgccggggccggggtgggtggtgccgccgccgccgcagccgcagccgcagcagcagcagcaggcggtggtggtggacggccgggacggcctcgtcgcgtggctgcgcggcgagttcgcggcggccaacgccatcatcgacctcctcctcgcccacgcccgcgacgccgccgatcccgccgggttcgacgccgttgccgccgccgtccagcgcaggcggcaccactgggcccccgtcctccacctccagcattacttccccgtcaccgaggtcgccctcgcgcttcaccacgccgccgcgcgccaggggccgccgcctcctcctccgccgccgcgccccccgagcggtagcgccggtgccgagggagatgatgctgcgattgccagtggaggtgtgaaggaagtggagacatcggctgaagcaactcagaattctcagttggtttctcatatttcacatgctacagaagcccaacctcagaaaggacttcatgtaatcagtaatgtggttccagtcccaacttgctttgtggttaatgaagtaattgatggcaggatggtgaatgttctagaggggcttaagttgtataaagggtatgtagatctaactgagataggaaaggttctttcttttgtgaatgaagctaagactatgcggcgtaaaccaggactggaagggcaaacagttgtagttgccaaaaggccaatgaagggtcatggaagagaaattattcagcttggtcttcccatcacagaaggccctcctgaagatgaacatttaagagaggtaaaggtggatcctattcctggtgtgcttcaaaatctgtttgatagcttggttcatcagaaagttgtcccttccagtccagattactgtgttatcgatatcttcaatgagggagattattctcaccctcatcatcatcctccttggtatggtagacccatttgtacactctgcctgactgactgcgacatggtatttggccatgttattgcagcagatagccgaggcgatcatgcaggtccactgaaactctcactctctacagggtctgttctagtttttgagggaaagagcgctgatatagcaaaacgggcactccctgctacaagtaagcagcgtatcttactaagttttgggaagtctgtgtcaaggaagcacgttcagtcggaaagcagcttgcttatcactcccccattgacacctcctccgatgccttgggctgcaccattgaggccagggaacatagcaattcatccctcaagtcctaaacagcttgtctacaaccctagcaatagagtacctgcagtttcaacccctggacttcaccatattccatccaatggcatccagacagttttcgttgcaccacttcctatcactccaaaagctgttccatttgcatcagctgtcacattgccaaacagtacagccgcatggatcgcagaagctgctcccaggcccgcttcacctcgtttacctcttcagggtacaggggtattccttcctcctggatcaggcaatccacccccagctcagaagttgggcgtaaaacatgctgatgctaaaccattttttccacaagaatcatctgcctcttcatctggtgtaagtgctcgtgcacataaggctaatggtagtgtttcttccaaaccaacaaggaaagatgatatggctgaagctaagccaaagtgcaatgggagttcagatggtggtagctctgttgcccatgccaaggcaactggaggtttagaggagcagaatgttgtcgcaaagtag</cdnaseq>

Protein Sequence

<aaseq>MAAPGPGWVVPPPPQPQPQQQQQAVVVDGRDGLVAWLRGEFAAA NAIIDLLLAHARDAADPAGFDAVAAAVQRRRHHWAPVLHLQHYFPVTEVALALHHAAA RQGPPPPPPPPRPPSGSAGAEGDDAAIASGGVKEVETSAEATQNSQLVSHISHATEAQ PQKGLHVISNVVPVPTCFVVNEVIDGRMVNVLEGLKLYKGYVDLTEIGKVLSFVNEAK TMRRKPGLEGQTVVVAKRPMKGHGREIIQLGLPITEGPPEDEHLREVKVDPIPGVLQN LFDSLVHQKVVPSSPDYCVIDIFNEGDYSHPHHHPPWYGRPICTLCLTDCDMVFGHVI AADSRGDHAGPLKLSLSTGSVLVFEGKSADIAKRALPATSKQRILLSFGKSVSRKHVQ SESSLLITPPLTPPPMPWAAPLRPGNIAIHPSSPKQLVYNPSNRVPAVSTPGLHHIPS NGIQTVFVAPLPITPKAVPFASAVTLPNSTAAWIAEAAPRPASPRLPLQGTGVFLPPG SGNPPPAQKLGVKHADAKPFFPQESSASSSGVSARAHKANGSVSSKPTRKDDMAEAKP KCNGSSDGGSSVAHAKATGGLEEQNVVAK</aaseq>

Gene Sequence

<dnaseqindica>3141..3870#2570..2724#2379..2491#2175..2282#1630..1747#1451..1524#830..925#65..458#attccatcagaattggcgaaaccctagcagcagattgccccgccatgctctgagcccgccgacgatggccgcgccggggccggggtgggtggtgccgccgccgccgcagccgcagccgcagcagcagcagcaggcggtggtggtggacggccgggacggcctcgtcgcgtggctgcgcggcgagttcgcggcggccaacgccatcatcgacctcctcctcgcccacgcccgcgacgccgccgatcccgccgggttcgacgccgttgccgccgccgtccagcgcaggcggcaccactgggcccccgtcctccacctccagcattacttccccgtcaccgaggtcgccctcgcgcttcaccacgccgccgcgcgccaggggccgccgcctcctcctccgccgccgcgccccccgagcggtagcgccggtgccgagggagatgatgctgcgattgccagtggtattcacctttttgtgatttatgccccctctcctttattatgaatacattgtatacgaactacttttgggggaagggaatgcgtctaatctatccaattgcaattaattggagtagtaactttttttttatcttagtgaggatacactttttaagggcacgattgatgccgcagaaacggcttctttatctatgatgattcttagaagaaccaaaccaactcacattaggtgctatgggaatgaaaattaataatgtagtctgcacctaatgctctttatgttaggcatttatggatgctcgatctttacactttactgttgatgcgcttgggtctcatcaatctcgtactcatgtattcttgcctacaggaggtgtgaaggaagtggagacatcggctgaagcaactcagaattctcagttggtttctcatatttcacatgctacagaagcccaacctcagaaaggtatatggcgttcatggcttgtgttaaaaccgtctgtgagctcacaagatccttgtattcaatgtatctattttgatctgacttggcttcctttctcatatttgaatatacctgagtgagccatgccaacaacaatatcagctgatcaataagtgctgggcgcatagttgtgttgtgtccattcaataattttatggcactactgctttcttcttgttctaaattctatataatctttaagacacaatggtcacatcaacagcctatgtccctcttccattactgcctatacctcaacaagctctgccatcattctttcagtgactatgaggcgcatttggtgcttttgaaatgtcagctatagttttcaaaaattgctgtttgtaaagttaactaggttgtaaaggtgctctatttttcttaaagctatactggtattctgtgtgtaatacaacaaaatgcctggatgattgaatcacatctaatacattttgtatgttcatgtcttgtttggcctccatataggacttcatgtaatcagtaatgtggttccagtcccaacttgctttgtggttaatgaagtaattgatggcaggatggtatgtcacttctctggacagattcccaatttccactttgaagtaattatttcagtacatcaagtttaccttattatcttgtatgtaacatttgcttctttttaggtgaatgttctagaggggcttaagttgtataaagggtatgtagatctaactgagataggaaaggttctttcttttgtgaatgaagctaagactatgcggcgtaaaccaggactggaaggtacggcattgttggttcctttgctctatatggttattgagttggagatgcacggtcaccatttttcttttgtattgtcgggttttatcaaattatttacactagatcccctatttatgtaaaatgattttggatatgtatgtatgtacttattatgcaaccatagggatcgtcgcaactttgtctattttcatcttagccttaggagttcctttatggtctattgaccctatggaagaagcattcccccttttgttttctgtatggggttgcgctggtctgaaaagttagacaatatgttgtttgctgcatcatagtgactgcctccagcatttcgttttagtgtcagcagatagtgtcctgtctgaccttcacagtgcatctttgtaaaatgtgctgtgttatataattctatgataaaaagcagggcaaacagttgtagttgccaaaaggccaatgaagggtcatggaagagaaattattcagcttggtcttcccatcacagaaggccctcctgaagatgaacatttaagaggtacatcaagccaggttgtcaatatttactctattgtaaattcatgatagctctaagattttatgacctgtcatctgtcttgggattggaatgcagaggtaaaggtggatcctattcctggtgtgcttcaaaatctgtttgatagcttggttcatcagaaagttgtcccttccagtccagattactgtgttatcgatatcttcaatgaggtaaattctcattgaagtgggctaggagttgattctttctgaagtttatagtgatgctgattaagttactattttcagggagattattctcaccctcatcatcatcctccttggtatggtagacccatttgtacactctgcctgactgactgcgacatggtatttggccatgttattgcagcagatagccgaggcgatcatgcaggtccactgaaactctcactctctacagggtaaggatgctaaatcagccatctttctttaattaaaggaatatttcatcatggattacttgtcacaccttttacctgtctacctatcatgtttttgcatcatctgttccacttcaatggccatattttagactgaacaaatcaactcattcttaactgaagtggatatcctaattagggtaaaaattctaaaagtagtaaacaaaagtacgccagtcaaacttcattaatgcaaatgtgctgcttgctctgttcttgttttctagttcgcatttatcatgaaaagtatatctagtttgtttattgccatccaccaatatgagtaaatgtgtattacctccatggctcggggacaggacatatctgatgggcaagctgaccattctaaattaatgatcgttttatgttgattccaggtctgttctagtttttgagggaaagagcgctgatatagcaaaacgggcactccctgctacaagtaagcagcgtatcttactaagttttgggaagtctgtgtcaaggaagcacgttcagtcggaaagcagcttgcttatcactcccccattgacacctcctccgatgccttgggctgcaccattgaggccagggaacatagcaattcatccctcaagtcctaaacagcttgtctacaaccctagcaatagagtacctgcagtttcaacccctggacttcaccatattccatccaatggcatccagacagttttcgttgcaccacttcctatcactccaaaagctgttccatttgcatcagctgtcacattgccaaacagtacagccgcatggatcgcagaagctgctcccaggcccgcttcacctcgtttacctcttcagggtacaggggtattccttcctcctggatcaggcaatccacccccagctcagaagttgggcgtaaaacatgctgatgctaaaccattttttccacaagaatcatctgcctcttcatctggtgtaagtgctcgtgcacataaggctaatggtagtgtttcttccaaaccaacaaggaaagatgatatggctgaagctaagccaaagtgcaatgggagttcagatggtggtagctctgttgcccatgccaaggcaactggaggtttagaggagcagaatgttgtcgcaaagtaggctggctacaagatctctgttatcttaaaagtagatagctgaagatattgaaatttctttttgtccaagtggttacaggagtttccaaacacaggctatattcttgagtaagtgctatgctcttggaaatgttgcacgacagcgtgatgctcaagatcaaatagttttgaacattgtagctatctgaaagcaaaactgcactcaccacacaacttcatcttctctacggcgtcattagagcagcgggaccaattatgatgctttttttttttggtcagagcttaagcatcaatttttgtatgttatgagcctcccatttgctcatggagtgcaatttgaggagaaattcgaaagaaaattttgtatatgatgctatatatgtcatctttgttgcataacgaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0116900, RefSeq:Os10g0116900