Os04g0514500

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Revision as of 11:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0514500| Description = Protein prenyltransferase domain containing protein| Version = NM_001059842.1 GI:115459413 GeneID:4336394| Length = ...")
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Gene Name

Os04g0514500

Description

Protein prenyltransferase domain containing protein

Version

NM_001059842.1 GI:115459413 GeneID:4336394

Length

5033 bp

Definition

Oryza sativa Japonica Group Os04g0514500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26100954..26105986

Sequence Coding Region

26102876..26105959

Expression

GEO Profiles:Os04g0514500

Genome Context

<gbrowseImage1> name=NC_008397:26100954..26105986 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26100954..26105986 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgctccgccgcccgcgtccgcctcgcgcccaaaccgagagccaaccagcctcctcctcctcctcctcctccgtttcggctcgcccccgccgccgtcgcggcgctcggatcccaccccgacgcctcctcctacgccagcctcctctcctccctctccagagagtgccacgcccgccacccgttcgacgcaagtcccccgagagcccgccactcgcagacatgcagggccttgcacggccggatactgcgcggcggatcacccctcctgggacgcctcggcgactcgctcgtcgaactgtactgcaagtccggccgtgtgggctatgcctggagcgccctgggatacgccggggagcgggcttcaggcgcggcgagctccctgctgtcctgccatgcgcggtcggggtcccctggggatgttctcggcgcgttccggtatatcaggtgcactgccggtggccggccggaccagtttggtcttgcggtcgttctgtcggcgtgttccagggtgggtgttcttgcttacggcaggcaggtgcattgcgatgtggtcaagagcgggttcagttccagtgtcttctgcgaagcggcgttggtggacatgtatgccaaatgcggtgatgtgcccaatgctcgcagggtgtttgatgggattgcttgcccagacacaatatgctggtcaagcatgattgcttgctatcatcgagttggatgctaccaggaagcgttggctttgttttctaggatggataagatgggctctgctccggatcaagtgacacttgttaccatcatttccacacttgcaagctcgggcaggctggaccatgcaacagctttgctgaagaagatgcctacaccaagcacagttgcttggaatgctgtcatctctggtcacgcacaaagtggactcgagtttaatgtgcttggcttgtacaaggatatgaggagctgggggttatggcccactagatcaacttttgcaagcatgctaagtgcagcggctaacatgaaagcttttgttgaaggccagcagatgcatgctgcagcagtaatgcatggcttggatgcaaatgtatttgtgggaagttctctgatcaacctgtatgctaaatgtggctgccccagtgacgcgaagaatgttttcgacttgtcctgtgaaaagaacattgtcatgtggaacgctatgctcacaggttttgttcagaatgaattgccagaggaagctattagaatgtttcagtatatgatgaggtatacccttcaaaccgatgaatttacgtttgtcagtattcttggtgcatgcacctacttgagttccttttatctgggaaaacaagtacattgtgtaacaatcaagaactgcatggatataagcttgtttgttgctaatgcaacactagatatgtactcaaaatatggagcaattggtgatgcaaaggcactattcagtctaatcccttacaaggatagtatatcctggaatgcccttacagtaggacttgcacagaacctagaggaggaagaagcagtgtgtatgctcaaaaggatgaggctgcatggtataacacccgatgatgtatctttttctactgcaattaatgcttgttccaatatccgagccactgaaactggaaagcagatccattgcctggccatcaaatatggtatctgctcaaatcatgctgttggtagctctctgattgacttgtattcaaagcatggagatgtagagtcttctaggaagatttttgcacaagtagatgcgagtagtatagtgccaataaatgctttaattgcaggttttgtgcagaacaataatgaagatgaagcaatacaactgtttcagcaagttctaaaagatggtttaaagccctccagtgttacattttcaagcattctttctggctgtagtggatctcttaattcagctattggcaagcaagttcattgttacacactgaagtctggtgttctatatgatgatactctccttggtgtttcattggctggaatatatttgaagtccaaaatgcttgaggatgcaaataaactcttaacagaaatgccagatcacaaaaacctgtttgagtggacagctatcatttcagggtatgctcaaaatggttatggtgatcactctttggtgtcattttggagaatgcgtcattgtaatgttcgctcggatgaggcaacatttgcaagtgttcttaaagcttgttcggatgtaacggcttttgcagatgggaaagagatacatggcctcatcactaaatctgggtttggttcttatgaaactgcaactagtgccctcatagacatgtattccaagtgtggggatgtcatttcttcctttgaagccttcaaagaattgaaaaacaaacaagatataatgccatggaactctatgattgttggatttgcaaaaaatggttatgctgatgaggcacttctgcttttccagaagatggaggagttgcagataaagcctgacgaagttacattcctaggtgtcctaattgcttgtactcattctgggctaatttctgaaggtcggcatttctttggttccatgagaaaagtttatggattaacacctagactagatcattatgcctgttttattgatctccttggacgtggtggtcatcttcaagaggcccaagaagctattgaccagttgcctttcagacctgatggtgtggtctgggctacgtatcttgcagcatgcagaatgcacaaggatgaagaaagggggaaaattgcagcaaggaaacttgttgagttggaaccacaatactcatctacatatgtgttgctttcaagcttacatgctgctactggtaactgggctgaagctaaggtaaccagagaatcaatgcgagaaaaaggagtggcaaaatttccaggatgtagttggattaccgtgggaaacaagacaagcttgtttcttgtacaggataaataccaccctgacaatcttagaatctatgaaatgcttggtgatctaactggaatgatgaagaaagataacgatattgatgagtatggtctactttattcagctgaaatgcttgcttga</cdnaseq>

Protein Sequence

<aaseq>MRSAARVRLAPKPRANQPPPPPPPPFRLAPAAVAALGSHPDASS YASLLSSLSRECHARHPFDASPPRARHSQTCRALHGRILRGGSPLLGRLGDSLVELYC KSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFG LAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDG IACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLD HATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSA AANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIV MWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEE EEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGS SLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL KPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLED ANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKA CSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDI MPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFF GSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMH KDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGC SWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKKDNDIDEYGLLYSAEMLA</aaseq>

Gene Sequence

<dnaseqindica>28..3111#tgcggcggcggccgcggccgtgcacacatgcgctccgccgcccgcgtccgcctcgcgcccaaaccgagagccaaccagcctcctcctcctcctcctcctccgtttcggctcgcccccgccgccgtcgcggcgctcggatcccaccccgacgcctcctcctacgccagcctcctctcctccctctccagagagtgccacgcccgccacccgttcgacgcaagtcccccgagagcccgccactcgcagacatgcagggccttgcacggccggatactgcgcggcggatcacccctcctgggacgcctcggcgactcgctcgtcgaactgtactgcaagtccggccgtgtgggctatgcctggagcgccctgggatacgccggggagcgggcttcaggcgcggcgagctccctgctgtcctgccatgcgcggtcggggtcccctggggatgttctcggcgcgttccggtatatcaggtgcactgccggtggccggccggaccagtttggtcttgcggtcgttctgtcggcgtgttccagggtgggtgttcttgcttacggcaggcaggtgcattgcgatgtggtcaagagcgggttcagttccagtgtcttctgcgaagcggcgttggtggacatgtatgccaaatgcggtgatgtgcccaatgctcgcagggtgtttgatgggattgcttgcccagacacaatatgctggtcaagcatgattgcttgctatcatcgagttggatgctaccaggaagcgttggctttgttttctaggatggataagatgggctctgctccggatcaagtgacacttgttaccatcatttccacacttgcaagctcgggcaggctggaccatgcaacagctttgctgaagaagatgcctacaccaagcacagttgcttggaatgctgtcatctctggtcacgcacaaagtggactcgagtttaatgtgcttggcttgtacaaggatatgaggagctgggggttatggcccactagatcaacttttgcaagcatgctaagtgcagcggctaacatgaaagcttttgttgaaggccagcagatgcatgctgcagcagtaatgcatggcttggatgcaaatgtatttgtgggaagttctctgatcaacctgtatgctaaatgtggctgccccagtgacgcgaagaatgttttcgacttgtcctgtgaaaagaacattgtcatgtggaacgctatgctcacaggttttgttcagaatgaattgccagaggaagctattagaatgtttcagtatatgatgaggtatacccttcaaaccgatgaatttacgtttgtcagtattcttggtgcatgcacctacttgagttccttttatctgggaaaacaagtacattgtgtaacaatcaagaactgcatggatataagcttgtttgttgctaatgcaacactagatatgtactcaaaatatggagcaattggtgatgcaaaggcactattcagtctaatcccttacaaggatagtatatcctggaatgcccttacagtaggacttgcacagaacctagaggaggaagaagcagtgtgtatgctcaaaaggatgaggctgcatggtataacacccgatgatgtatctttttctactgcaattaatgcttgttccaatatccgagccactgaaactggaaagcagatccattgcctggccatcaaatatggtatctgctcaaatcatgctgttggtagctctctgattgacttgtattcaaagcatggagatgtagagtcttctaggaagatttttgcacaagtagatgcgagtagtatagtgccaataaatgctttaattgcaggttttgtgcagaacaataatgaagatgaagcaatacaactgtttcagcaagttctaaaagatggtttaaagccctccagtgttacattttcaagcattctttctggctgtagtggatctcttaattcagctattggcaagcaagttcattgttacacactgaagtctggtgttctatatgatgatactctccttggtgtttcattggctggaatatatttgaagtccaaaatgcttgaggatgcaaataaactcttaacagaaatgccagatcacaaaaacctgtttgagtggacagctatcatttcagggtatgctcaaaatggttatggtgatcactctttggtgtcattttggagaatgcgtcattgtaatgttcgctcggatgaggcaacatttgcaagtgttcttaaagcttgttcggatgtaacggcttttgcagatgggaaagagatacatggcctcatcactaaatctgggtttggttcttatgaaactgcaactagtgccctcatagacatgtattccaagtgtggggatgtcatttcttcctttgaagccttcaaagaattgaaaaacaaacaagatataatgccatggaactctatgattgttggatttgcaaaaaatggttatgctgatgaggcacttctgcttttccagaagatggaggagttgcagataaagcctgacgaagttacattcctaggtgtcctaattgcttgtactcattctgggctaatttctgaaggtcggcatttctttggttccatgagaaaagtttatggattaacacctagactagatcattatgcctgttttattgatctccttggacgtggtggtcatcttcaagaggcccaagaagctattgaccagttgcctttcagacctgatggtgtggtctgggctacgtatcttgcagcatgcagaatgcacaaggatgaagaaagggggaaaattgcagcaaggaaacttgttgagttggaaccacaatactcatctacatatgtgttgctttcaagcttacatgctgctactggtaactgggctgaagctaaggtaaccagagaatcaatgcgagaaaaaggagtggcaaaatttccaggatgtagttggattaccgtgggaaacaagacaagcttgtttcttgtacaggataaataccaccctgacaatcttagaatctatgaaatgcttggtgatctaactggaatgatgaagaaagataacgatattgatgagtatggtctactttattcagctgaaatgcttgcttgagtgtgctggtgctgcttaagagcaaagggccttaattcatcttctggatcatcgaggaccttcaataaatgcatgtttagttgagagatttggaatgttatgcatattatttattcaaaagtacatatactcgtaccaataattgctttacttgctgcaattgcagcaccagactttgaaaaggatcagcaccgctaggtgatattggattggcaaatatcagaagtggacatgacaatgggcctgctatttttcatctgtaagcagtatttcaatacctaggttgttagaacattgtattgcttttgccccaacttttttccctgctctcgttcaaaaaccctactttggtcatcttacttcacctttgcctatgtttcttgttccagaaatgatcctcagaggattatttggacggaggacaactggccatatttggaaaagaacctactcaagttaattgttatgtcagaaacagtccaaacagcaaagtaagattctatttagttttcacataaaattattctctcaacgaatatatgtgaaaggccacattttgtcactatcagctaagtcactgtaattccaaaaatatgcaagatgttgtctgctatttggcaaaatcctatcacaaatcactttctcctcagtgatttctgttcctgacttcatagtccaaaatttaaagaattctttattgaattgctggcaaataaagttctcattactttgttaatcaaaggaagaattataaagttaaatactaagttatcaaagaagaaataattgtagttaagctccaagttattactcccagatagtaatttagtgatggttcaagaacaaatgaacaatagaaattatgctgaatacaattttccaatataaactgaattggcacaaattattactttttctgaaattaaacttgatcttccaagtagggaaaaccaccaagcaacatagcctcatagaataccacatacttgttgacaaggttttttttttttctgaaaagaatatgatgtgagaactaacaatcagcatgcaaatatttcaagcctgatttgacaaagcagtcaacctttcgttaatatttcctatcctattatacaaaaacaaaattgtctcaaacgtgactaccttttgtatagggcactaacactggccatgtgaatactattcttcaactgttgtgaaaaagaacttgaataattggcaagtatctatctacataaactgttatagatgttcacaaatgaaacagcatgttggtccagcacgttgcttagttcgtggctactgtcttcccttcacaaacatcacatacaattgaaccaaggccttcacagtatggacacttcgtatcttcaccgacccactccaaaaactgcattttgaggggtaaacagaaaggtgcatatcagagaataaatagcatacttatattcactatatgatgcgatcctgcaactggaactcgagcttacctgtggttcaatgttcggctcacctgttccatcacattctgcaggaagaaagaaaaaggtcttgtcaggagtcgcaactcacaagcagctcatttctcaatacattacaaatgctgtacatgttgtgccaccaagcagcaaatgttattacctacgcacatgaggcggccttcaccccgacaagagatgcacttcttagttgatgcattggtagcgctgctgattggtttattcttctgtgttagcctagatgggtcttcccacctgttttcaccgatgagaaacactctattttcagacaaccctactcctgagacaccatttcctttcacaacagtttgttgaatctctgcaatttctgttatggagggaatggctgctccatttatgccatcctacaagagagttggattagaatatcatgccatgact</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0514500, RefSeq:Os04g0514500