Os04g0515900

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Revision as of 11:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0515900| Description = Similar to NAM / CUC2-like protein| Version = NM_001059847.1 GI:115459423 GeneID:4336400| Length = 2837 bp| Definit...")
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Gene Name

Os04g0515900

Description

Similar to NAM / CUC2-like protein

Version

NM_001059847.1 GI:115459423 GeneID:4336400

Length

2837 bp

Definition

Oryza sativa Japonica Group Os04g0515900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26171888..26174724

Sequence Coding Region

26172058..26172226,26173670..26173935,26174043..26174444

Expression

GEO Profiles:Os04g0515900

Genome Context

<gbrowseImage1> name=NC_008397:26171888..26174724 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26171888..26174724 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtctgagggagatcgagtcgacattgccgccggggttcaggttctacccgagcgacgaggagctggtctgccactacctctacaagaaggtgtccaacgagcgcgcctcgcaggggacgctggtggaagtcgacctccatgcgcgcgagccatgggagcttcccgacgtggcgaagctgacggcgagcgagtggtacttcttcagcttcagggaccgaaagtacgcgacggggtcgcgcacgaaccgcgccaccaagacaggctactggaaggccaccggcaaggaccgcgaggtgcgcagcccggccacgcgcgccgtcgtcggcatgcggaagacgctcgtcttctaccagggccgcgcccccaacggcgtcaagtccggctgggtcatgcacgagttccgcctcgactcgccgcattctccaccaaaggaggattgggtgctttgcagggtgtttcagaagagcaagggagacggcgagcaagacaaccccaccagcgcagcctccccggcggcgaccttcgccggctcgtcgcaggcggcggtgcctggccaagccgcgtacagcagcgacgaccatacgggctcgtcgatgggattcgcgccgaggcagaacgagatactcgacagctcgagccatcagttgctgaacttggcgatgctgcagtgcaactcggttctcgatcatttcccgcaggaggtgaacagctcgccgatgatggggttggcagggtccatcggaattggggatgaatacggcttcttctacgataccggcttcgaggagacggcgagcctcgggggcatgaggttcccacaagggtggagttga</cdnaseq>

Protein Sequence

<aaseq>MGLREIESTLPPGFRFYPSDEELVCHYLYKKVSNERASQGTLVE VDLHAREPWELPDVAKLTASEWYFFSFRDRKYATGSRTNRATKTGYWKATGKDREVRS PATRAVVGMRKTLVFYQGRAPNGVKSGWVMHEFRLDSPHSPPKEDWVLCRVFQKSKGD GEQDNPTSAASPAATFAGSSQAAVPGQAAYSSDDHTGSSMGFAPRQNEILDSSSHQLL NLAMLQCNSVLDHFPQEVNSSPMMGLAGSIGIGDEYGFFYDTGFEETASLGGMRFPQG WS</aaseq>

Gene Sequence

<dnaseqindica>171..339#1783..2048#2156..2557#aaaatttacacctatatctatctatatttctcgtttgtgctcgggctagctcaccatatgcgtaaaattctgtagccaaaaggagcaagcaaactaggaggaggattagttcttgcgcatcgcttctgagctcgatctacgtcgtccggccggccgggagggatcgatcgatgggtctgagggagatcgagtcgacattgccgccggggttcaggttctacccgagcgacgaggagctggtctgccactacctctacaagaaggtgtccaacgagcgcgcctcgcaggggacgctggtggaagtcgacctccatgcgcgcgagccatgggagcttcccggtgagtcatgaattaatatatcctgcatgttgctgctaattctcatcgttctatatatctctcccctcgatctcgcacaggttgctttatcactagtaactcttatgttagcatgtttccggattagatatatagatcatagatgtgatgatctcgatcgagatgcttacagaaaacagcaaaaaccatgcatctgattttcttcatgatgcgataggctagcagattaattagcatgctctgttccattgaagatatatttgcaaaaaaaaaaaaagcttgcccctttaatttggtagcaccgtagcagcaagtactgatgatgtcacaattataatgatgaacaagaaaataactacctgatcgaagaattttctacttagtatatatatttgaattattttaacttgaatgaatcctaaagattcgatttctgtcagttaatggccttgagctccataatttatcacggaataatccacaataatttcgtccaataatacattaactgatacgaaagcaaagtgttatactcgtcgccatcttgatgacgactccgataccgtctgtttctttgctacgtcacatgagtaacagttccttccgtttttctgttccttttttctctgaaaaaccatttccctttttcctccagaaattagttcagtttgagcactttacggccgtcaatctaaactctcctcggtgtatcagaacggatttgctagtttactggcgacagtaaacgaggggaaaaactgccgaatttttgaacgtcggattcgcctcaagattagtgctggcgcgttcgtgcaaaagatccacgcgatatgtaaagaaaaactgccgaatttttgaacgtcggattcgcctcaagattagtgctggcgcgttcgtgcaaaagatccacgcgatatgtaaagaaaaactgccgaatttttgaacgtcggattcgcctcaagattagtgctggcgcgttcgtgcaaaagatccacgcgatatgtaaatttgtgtgttgcatggggttcgaacccaggacttcaatcccactagctatgcgtggtagccacttcgtctcatgcaagttttttaaaaagtttgcaagttacagttagttatactccagttacactctagttacattgtagttaccattgtaactatagtgtaactacactataactatattgttatctctatataaattagatataaagttgcatatattattttaatacatatatacaagttattattattatagtatataattctagtaaaatttcccctcaaaaaacactcgacagttttttagctaatccctatcagaaattagtttcacttcatgtatgcaaagccagactaattcgcatgcactatctcaacttctcaagcccctctctaacaacgcattcgttcttgctattctttgcgcacatgcagacgtggcgaagctgacggcgagcgagtggtacttcttcagcttcagggaccgaaagtacgcgacggggtcgcgcacgaaccgcgccaccaagacaggctactggaaggccaccggcaaggaccgcgaggtgcgcagcccggccacgcgcgccgtcgtcggcatgcggaagacgctcgtcttctaccagggccgcgcccccaacggcgtcaagtccggctgggtcatgcacgagttccgcctcgactcgccgcattctccaccaaaggtacgtacatagcacgagctagctcttctctctacccgccaaaacgtgctacttcttgttgccgctaattgctaacctggacacggatcgatatgcgtttcttgcaggaggattgggtgctttgcagggtgtttcagaagagcaagggagacggcgagcaagacaaccccaccagcgcagcctccccggcggcgaccttcgccggctcgtcgcaggcggcggtgcctggccaagccgcgtacagcagcgacgaccatacgggctcgtcgatgggattcgcgccgaggcagaacgagatactcgacagctcgagccatcagttgctgaacttggcgatgctgcagtgcaactcggttctcgatcatttcccgcaggaggtgaacagctcgccgatgatggggttggcagggtccatcggaattggggatgaatacggcttcttctacgataccggcttcgaggagacggcgagcctcgggggcatgaggttcccacaagggtggagttgatgccaattgatcgtgcatgcagtgagatcatcgtgcctgcgcgcatttgcgaaggaaaatgattgaattaattccattgatacagttatttcgtcctaaaaaaataaactattgctactgtaggtagtgtttggtttagcatagaacctgcatgagatggttcggtcacttgaactgtatatatattgtgtgagtcaaaatgtatcgctctactcgtatgcaagttgatacaatccatcccaaagttccagttcatagatcaaacgatctatgagctatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0515900, RefSeq:Os04g0515900