Os04g0519100

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Revision as of 11:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0519100| Description = Conserved hypothetical protein| Version = NM_001187090.1 GI:297723310 GeneID:9269464| Length = 5781 bp| Definition ...")
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Gene Name

Os04g0519100

Description

Conserved hypothetical protein

Version

NM_001187090.1 GI:297723310 GeneID:9269464

Length

5781 bp

Definition

Oryza sativa Japonica Group Os04g0519100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26375472..26381252

Sequence Coding Region

26375472..26375816,26376448..26376540,26376626..26376838,26376960..26377213,26377368..26377460
,26377854..26378031,26380060..26380806,26380945..26380975,26381056..26381252

Expression

GEO Profiles:Os04g0519100

Genome Context

<gbrowseImage1> name=NC_008397:26375472..26381252 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26375472..26381252 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgatgttgaaacaagatttaatcgggagccaagaaataaaggtttctccaatgaagaagcttatggtgttgatgtttttgggcatggagttaattttacttctgcacctgaatatgtatatgatgaaaatggcattgatcaaatggtgtggtttgtgctaaacaactgtgcccaagttgagtattacgtcaatttgttcatagaagagttagagacacaagggattttgaagaagcatagtacaaatccagaagaggtggatgttgatatcttctccttggcatgcggtcctgatttgagagttagaaaatactcctcgtgcatagtgaatggtgtgcggtttaacacagttaaccgtgacaagaacaagaagacactgaatagtggagtaatgtcacaagctacacataatggtcagttaattgatttttttggaaacataaaagagataattcagttggactataacttagaggagaggtccgtagttttgtttgagtgtgactggttcaaactggatggaaagaggactgcacttaaagatgatggcttttttaaaagcatcaatgttggaagtttgtggtacaagaatgattgtttcatattggccactcatgctacgaaggttttctatttgccagatacaaagctgggtgaaaattggcaagttgtacagacatttgaccataggcatctttataacgtaagtcagatggaggttagtgctgctgcatatcaagaagacgagtgctatgatgaggaggatccacgccgaccagtttctagcattatatatgatacgcctttaaatagagatgatgagcgtggccctgtttttgaagctgctgaaattgctcggttgatgaaagaatctagcaaagaagtgaatgtcattggtgatgaagatgaagatgaagaagatgacacacttatggagtattttaacgaagaagacgactcagttatggagcagtgctctaaggagaagactcgcaagaactgtaacaacaaaacttcaagcatccagactggtggagtcaagtttcggtctcgcaagagagtttatgcagagcaaatgactcctaaagttacaaggttaaagaaaagcattgcccaacaagatgcaagtctcataccaagtgatatttatggcttcacccagcatgatgacaacacccttgtggctgatgtagttgatggcattactcaacacggtgaccacaaccagattaccaacgaagggggagtggagagaagggaccggggaaataatatgggacgttgtctccaaaggttaaaccgagcgtgccgtggcaagctgcaagttgtcataactgaagggaatataaggccagtggttcctcttgttgctgcaaagtttgcaactgaatgcaacatcatagttaggaaccatgtgcctatactcccgcattggaagctatacaaggaaaaacctgcatctgcgtacgttaatctgttcttaggaaaactaaaggccaagtttgacataaacatagaggatgatacagttaaaatggcttgtactgagatgatgaagtccgcagttcgccaacaaagatacaggctgaagcaaaaatattttgatccttttccactacatttggttacaaaaacttctcctgtcaaattcatgagtaatgaacagtggactcaactcctagaatcatggaagagtccccaaaagatggagatgtgtcaaaagaacaaagaaaaccgagggaatgttaagtaccatcacacaaccggatctcgtgcctacatggttcatgttgaaaatttgactcggatggaaaacaagctatctacaacaacagaaggtgaagaacttaagtcagcggctcaagttgttgctgatgtgcttgctgagaacaccaagaagaatcggttcttgaagaatgtggggttccataatgcccagcctagattcagtgagcagagcactgagacagaactagaagcggagaaaaggaccaatgctgagcttcgtgcacaggtggctgatttgtcaaacaaagtgcaagaatctgagcaggcaaggattaaagaccgagaggagatgaagaggagtcaatctgagatggaagcaaaacttaatcttttgctcagtcaaattcgaccaagttaa</cdnaseq>

Protein Sequence

<aaseq>MDDVETRFNREPRNKGFSNEEAYGVDVFGHGVNFTSAPEYVYDE NGIDQMVWFVLNNCAQVEYYVNLFIEELETQGILKKHSTNPEEVDVDIFSLACGPDLR VRKYSSCIVNGVRFNTVNRDKNKKTLNSGVMSQATHNGQLIDFFGNIKEIIQLDYNLE ERSVVLFECDWFKLDGKRTALKDDGFFKSINVGSLWYKNDCFILATHATKVFYLPDTK LGENWQVVQTFDHRHLYNVSQMEVSAAAYQEDECYDEEDPRRPVSSIIYDTPLNRDDE RGPVFEAAEIARLMKESSKEVNVIGDEDEDEEDDTLMEYFNEEDDSVMEQCSKEKTRK NCNNKTSSIQTGGVKFRSRKRVYAEQMTPKVTRLKKSIAQQDASLIPSDIYGFTQHDD NTLVADVVDGITQHGDHNQITNEGGVERRDRGNNMGRCLQRLNRACRGKLQVVITEGN IRPVVPLVAAKFATECNIIVRNHVPILPHWKLYKEKPASAYVNLFLGKLKAKFDINIE DDTVKMACTEMMKSAVRQQRYRLKQKYFDPFPLHLVTKTSPVKFMSNEQWTQLLESWK SPQKMEMCQKNKENRGNVKYHHTTGSRAYMVHVENLTRMENKLSTTTEGEELKSAAQV VADVLAENTKKNRFLKNVGFHNAQPRFSEQSTETELEAEKRTNAELRAQVADLSNKVQ ESEQARIKDREEMKRSQSEMEAKLNLLLSQIRPS</aaseq>

Gene Sequence

<dnaseqindica>5437..5781#4713..4805#4415..4627#4040..4293#3793..3885#3222..3399#447..1193#278..308#1..197#atggacgatgttgaaacaagatttaatcgggagccaagaaataaaggtttctccaatgaagaagcttatggtgttgatgtttttgggcatggagttaattttacttctgcacctgaatatgtatatgatgaaaatggcattgatcaaatggtgtggtttgtgctaaacaactgtgcccaagttgagtattacgtcaagtatgttctatatacttacttttagacttcttctatatgctacctttgtgttgcacactaatttatttttttttctgcagtttgttcatagaagagttagagacacaaggggtgcctaacattgaaagaatgctttgacaaggatttcagacctggtttaggaaccatgttagtgttcattgtcaagttatatattgcataatgtaacttctatttttctaatatatgtgtgttgtatgcatgtggcagattttgaagaagcatagtacaaatccagaagaggtggatgttgatatcttctccttggcatgcggtcctgatttgagagttagaaaatactcctcgtgcatagtgaatggtgtgcggtttaacacagttaaccgtgacaagaacaagaagacactgaatagtggagtaatgtcacaagctacacataatggtcagttaattgatttttttggaaacataaaagagataattcagttggactataacttagaggagaggtccgtagttttgtttgagtgtgactggttcaaactggatggaaagaggactgcacttaaagatgatggcttttttaaaagcatcaatgttggaagtttgtggtacaagaatgattgtttcatattggccactcatgctacgaaggttttctatttgccagatacaaagctgggtgaaaattggcaagttgtacagacatttgaccataggcatctttataacgtaagtcagatggaggttagtgctgctgcatatcaagaagacgagtgctatgatgaggaggatccacgccgaccagtttctagcattatatatgatacgcctttaaatagagatgatgagcgtggccctgtttttgaagctgctgaaattgctcggttgatgaaagaatctagcaaagaagtgaatgtcattggtgatgaagatgaagatgaagaagatgacacacttatggagtattttaacgaagaagacgactcagttatggaggtcgatagtgacgacgaatagttctgtttgaattttatgttttaatattttgtcgtaaggctcaattagtatttgagaccatgttctacttatttgagaccatatgttctattatttcagatagcctcaatttgtatttgagatcatgttcatctatggaatttatgtataattggttcgatgccaaactattcatatccgtttttcaagttttgattctttgttggcctaaatggcatttcaacttgcctgtgtcaatgaaactacagatttagtctctactagttgagcctttatttttttattaactagaaaaaatacccgtgcgttgcaacgggtgaaggaatccgatcgtctcaacttacttagtgtgcgagttttttatagagatttcctatacggttccttttgtatttccaaaagcaaacaaacttataaaccgactcaaatacggatttgtattttcaaaaccgaacaaacttaaaaacgactcatatacggatgacataccaaagtaccagcaaaaacatcttcaatttttataatagtagacactttgtgatgggtactagttgagcctaaaaatgtttttaaaaatataatcgtgatgcaccactcacctaggatatgtacagcaccacatgacatgataaaccatgtgcggtgcttcacatacagctctcgccggacatcggggatcgccttgtttggcgttgggcgagtgacctattgtttttagtgcttttagtgcctgattcgactgaccttctttaaaacaatcatatctttttcatacggactcgaaattagacatataatatatccacagacatctacagaaaaagttacatccgattctccccgctttgccgggttcagtgaaattagaactaccaaattccgcttacaaaattatgttttctaggcgagaagctccggaaccccttggatagaactttgaaaaaattcctcatgcttcatcttttgtccgtttgagctaagaatttctatggttggttgcagtgtgctccgagactcgaaaaaaatatcaaaaaaaaaattcgcatctctctcctcagcactagagagagaaagcaacattgactctgtgcgttcgctccgtaggtttagtacggtgtgctgtctcctcccggctgatcatgttgtgtaacataaactctgtacatattgaagtgcaatccttttgcgtgttcgcgaaaaagtaatgggatcatggggcttgtttggccaaaattcctaattcctaaatttagattagtggaatatgactaataccgatggaataagatagattcaagggaacaaatttgcttcatgcattgttttataccacttactagctagaagcactaattgggaaattatcaacacctatatagttttattaatcattatcaacatttttttaagataataatcatcaacataagggatcataacatgatgaactatgtgtatcatatatggtgcttgtctaacctgattttctaattccaacaaaaaaaattaatggagtatgaaggaatgagacagattcaatcattcaaggggaacaaattttacatagtagcaaatctcaaatataagacttattataatatatactcatctagaaggttccaaacaaaacaggggctttgagttttcaggataaggggaaatcccgcgcgcccaagcggcttggcgcgcttgatgtgcgccagcccgaaatatttcacagtccgaattaccttactacccttaggttcataaaatataaaatatagagaacacttccatcagaaaatttctcaagggtacatcggtaattatgaaacagcacttcccaattcctccaaaaacctagccgccacccatcctccaaaacccatcttccagccgccacccttagattgatgatgagaatgcaaaggttgtaattcctttatgttgacaagtcttaacttgttatttttcttcctaattcaatgtaatactatgttgaccaatccatgcttttctttccagcagtgctctaaggagaagactcgcaagaactgtaacaacaaaacttcaagcatccagactggtggagtcaagtttcggtctcgcaagagagtttatgcagagcaaatgactcctaaagttacaaggttaaagaaaagcattgcccaacaagatgcaagtctcataccaagtgatatttgtatgccagctacatcacaagctaacgctggagatctcgatggcaacttagatgaccacacacaggctgctgttgaaggccagttctactgccacatttcttggttacattccattaacatgagtcagctataaaaatgtttaacttgctgatctaagtttattgcttgtttaccttttgaaaatattaacttgagttttaagaataaaaaaaattaatgaaaccaattttcacatttttacttgacaacactcacatgaccaccgggtatgatgctatcgaccaacataatcagcacaaccatatggacaatggaggtgatgaattcttactgtcgttatgtaagttttgtttgtatgatgaatgcttttcttacttgctgcccttttttagatggcttcacccagcatgatgacaacacccttgtggctgatgtagttgatggcattactcaacacggtgaccacaaccagattaccaacgaaggtgagtttgttcatctattttccatatttcatattgtctcagttgatcaatatttgtatgcaaagctttcaattcatgatcatcttggatcaatgtttgcttcacctcaataattttagttttaatttcaactgcaatgtacatttacaactagggggagtggagagaagggaccggggaaataatatgggacgttgtctccaaaggttaaaccgagcgtgccgtggcaagctgcaagttgtcataactgaagggaatataaggccagtggttcctcttgttgctgcaaagtttgcaactgaatgcaacatcatagttaggaaccatgtgcctatactcccgcattggaagctatacaaggaaaaacctgcatctgcgtacgttaatctgttcttaggaaaactaaaggtacatgcattctctggtcctttccacatttagtctcaatagaagatccattgtttgttattttaagccataaattactgaattgatattcttttctataaatgttcttccattcgattaggccaagtttgacataaacatagaggatgatacagttaaaatggcttgtactgagatgatgaagtccgcagttcgccaacaaagatacaggctgaagcaaaaatattttgatccttttccactacatttggttacaaaaacttctcctgtcaaattcatgagtaatgaacagtggactcaactcctagaatcatggaagagtccccaaaagatggtatgttctctctgcaaaaccagattgatgccttgtgcatgctaatctatcaccaaccttacatgtattgttgtctttaatgtaggagatgtgtcaaaagaacaaagaaaaccgagggaatgttaagtaccatcacacaaccggatctcgtgcctacatggttcatgttgaaaatttggtaagtgggccattttaagcaccatataattttttgtatgaacaagctactgcttaaatacgtctgcctcagcctaaacaagatgatgtccatgctcatgttgttatgttcatgagagtccattagtttgtggaatgttcaaggacactatatctgatccgatgccaatacattgtgtgaaaggtgatgagttaggtttccatctatgtctaagttgagtgtgttaatagattaaaagttattgtttttatgtctgtgtatgcagtgaaagacctctgttgcagttgtttgtctaagtggaaaacatagtgtgactgtgtgcaacaaatgaggctagaaattagttgaacatgttcttttagattctcaattgaacagtagctgcccagattttcgtaacatcttaattcatgctagacctaatgcatatatgttgttctcaggatgacaaatacaatgatgaagaacctaatgcatttgatttgttcaaggagttccactacagcaagaaaaaaaatgctacacccctgttgtacaggaggctattgtaagataattttcagactttgatctttgtagtgcttatttttaattctctcaacatcaaccatgtttgctactttcttgctagactcggatggaaaacaagctatctacaacaacagaaggtgaagaacttaagtcagcggctcaagttgttgctgatgtgcttgctgagaacaccaagaagaatcggttcttgaagaatgtggggttccataatgcccagcctagattcagtgagcagagcactgagacagaactagaagcggagaaaaggaccaatgctgagcttcgtgcacaggtggctgatttgtcaaacaaagtgcaagaatctgagcaggcaaggattaaagaccgagaggagatgaagaggagtcaatctgagatggaagcaaaacttaatcttttgctcagtcaaattcgaccaagttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0519100, RefSeq:Os04g0519100