Os04g0519700

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Revision as of 11:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0519700| Description = Similar to Auxin response factor 10| Version = NM_001059865.1 GI:115459459 GeneID:4336419| Length = 2825 bp| Defini...")
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Gene Name

Os04g0519700

Description

Similar to Auxin response factor 10

Version

NM_001059865.1 GI:115459459 GeneID:4336419

Length

2825 bp

Definition

Oryza sativa Japonica Group Os04g0519700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26411916..26414740

Sequence Coding Region

26411959..26413137

Expression

GEO Profiles:Os04g0519700

Genome Context

<gbrowseImage1> name=NC_008397:26411916..26414740 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26411916..26414740 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcaccttcatggagctcgcggggccgacggaaggcgacggcggcgggtccgtggactcccagctgtgggcggcgtgcgcggggagcatgtcgtcggtgccgcccgtgggcgcggcggtgtactacttcccgcagggccacgcggagcaggcgagcgcggccgtggacctgtcgtccgcgcgcgtcccgccgctcgtgccgtgccgggttgtcgccgtgcggttcatggccgacgcggagagcgacgaggtcttcgccaagatacgcctcgtcccgctacgccccggcgacgcggtggtggacgtgggcgaggcggccgcggccgaggcgcggcgggaggaggagaatagtaggccgaggccgacgtcgttcgccaagacgctgacgcagtccgacgcgaacaacggcggggggttctccgtgccgcggttctgcgccgagaccatcttcccggagctggactacagcagcgagccgcccgtgcagtccgtctgcgccaaggacgtgcacggtgtggagtggacgttccggcacatctaccggggcaccccgcgccggcacctgctcaccacggggtggagtcccttcgtcaacaagaagcagctcacggccggcgactccatcgtgttcatgcgtgacgagggcgggaacatccacgtcgggctccgccgcgctaaacgcgggttctgcagcatcggcggcgacgacgagagcctctcctcgattcccgggtgggaccagtacaggggcttgatgcggcgcaatgcgaccgcgaccgcgaccggtgggagaaccccgcccaaggggaaggtcccgccggagaacgtgctcacggcggcgacgagggccaccaccgggcagccgttcgaggtgctgtactacccgcgggcgagcacgcccgagttctgcgtgagggcggccgcggtcaggacggccatggccgtgcagtggtgccccggcatgcggttcaagatggcgttcgagacagaggactcgtcgcggatcagctggttcatgggcactgtcgccggcgtccaggcctccgaccccgtccgttggccgcagtcgccatggcgtctccttcaggtacacctacacggcaccaacatgagacaaccccaactcgatcacgatagagtcgtagagttcttgatcaattggcctcctcgcaggtga</cdnaseq>

Protein Sequence

<aaseq>MLTFMELAGPTEGDGGGSVDSQLWAACAGSMSSVPPVGAAVYYF PQGHAEQASAAVDLSSARVPPLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVD VGEAAAAEARREEENSRPRPTSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEP PVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGN IHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRGLMRRNATATATGGRTPPKGKVPPEN VLTAATRATTGQPFEVLYYPRASTPEFCVRAAAVRTAMAVQWCPGMRFKMAFETEDSS RISWFMGTVAGVQASDPVRWPQSPWRLLQVHLHGTNMRQPQLDHDRVVEFLINWPPRR </aaseq>

Gene Sequence

<dnaseqindica>44..1222#tggaaaccacctcattagtcatcccatcgagttgggttgagagatgctcaccttcatggagctcgcggggccgacggaaggcgacggcggcgggtccgtggactcccagctgtgggcggcgtgcgcggggagcatgtcgtcggtgccgcccgtgggcgcggcggtgtactacttcccgcagggccacgcggagcaggcgagcgcggccgtggacctgtcgtccgcgcgcgtcccgccgctcgtgccgtgccgggttgtcgccgtgcggttcatggccgacgcggagagcgacgaggtcttcgccaagatacgcctcgtcccgctacgccccggcgacgcggtggtggacgtgggcgaggcggccgcggccgaggcgcggcgggaggaggagaatagtaggccgaggccgacgtcgttcgccaagacgctgacgcagtccgacgcgaacaacggcggggggttctccgtgccgcggttctgcgccgagaccatcttcccggagctggactacagcagcgagccgcccgtgcagtccgtctgcgccaaggacgtgcacggtgtggagtggacgttccggcacatctaccggggcaccccgcgccggcacctgctcaccacggggtggagtcccttcgtcaacaagaagcagctcacggccggcgactccatcgtgttcatgcgtgacgagggcgggaacatccacgtcgggctccgccgcgctaaacgcgggttctgcagcatcggcggcgacgacgagagcctctcctcgattcccgggtgggaccagtacaggggcttgatgcggcgcaatgcgaccgcgaccgcgaccggtgggagaaccccgcccaaggggaaggtcccgccggagaacgtgctcacggcggcgacgagggccaccaccgggcagccgttcgaggtgctgtactacccgcgggcgagcacgcccgagttctgcgtgagggcggccgcggtcaggacggccatggccgtgcagtggtgccccggcatgcggttcaagatggcgttcgagacagaggactcgtcgcggatcagctggttcatgggcactgtcgccggcgtccaggcctccgaccccgtccgttggccgcagtcgccatggcgtctccttcaggtacacctacacggcaccaacatgagacaaccccaactcgatcacgatagagtcgtagagttcttgatcaattggcctcctcgcaggtgacctgggacgagccggagctcctacagaacgtaaagcgcgtgtgcccgtggctggtggagctcgtgtcgagcatgcccaacctccacctgccatccttctcgccgccgcgcaagaagccgcgcaacccgccttacgcggagctccccctcgagggccagatcttcaccggcccggtgttcccgcccaatccaatggcgcacgaccaccaccaccaccatggtttccctttcctccccttcccggacagtagtgctcaacctgcaggcatacagggagccaggcatgcgcagttcgcttcaccgttcccggagttccacatcggcaacctgcagccgaatctgatgctctacgccggcatccgcctcccgcccgccgatcgcgccgcccccgctcctcgcccgccgagaatcatcatcagcaccgacctgacgattggcagcccgggtaaacccgacgacgccgcgtgctctccctcatccggcggcaagaagatcgacgacaccaagccgcgggggtttctcctctttggacaggcaattctaaccgaggagcagatcaagaacggcaactccgatggtcgtccggcctcgccgaactgggacgccgagaaggcgcctaacacctcggaaggctccgactccggcgtcacccagggcagccccaccaagaacaccacgccgtcgtggagcctaccgtattttggaggcaacaacatcagccgcgcatccgagtacgagctgaatcccgggcagtgcaaggtgttcgtcgagtcggaaaccgtcggccggagcctcgatctctcggcgctgagctcgttcgaggagctgtacgcctgcctgtctgatatgttcagcattggcagcgatgaactgaggagccatctggtgtaccgcagccccgccggcgaagtcaagcacgccggcgacgagccattctggtgagcacactagccgttcgcccgttcctcgtcaatactagttgtatttaccactcggttatcaattcttgatctgaaacttagcgacttttctgtcatttgcagcgcgttcgtgaaatcggcgcgtaagcttaggatactgacagatgctggcagtgacaacctgggagattagaagaagtaataaatcagccgaataacttagggcgctactcctagtcttttagaagcaaaaataagccgagagctgcatgcacgtacagctgcatgagctgcggtttctccttgctccagtccagtctagagatttttattcagggtaaagctgatgcagtcttcagttaattaggtgttttttagtcctttttacagctttctcgctaggggtttcaggtaacaactactagcgcaaagtgcagacagaatgtagtctttgcaccttggtcatcaaatcaaatgtactggtacttcttttattctcattcggcggatattgagccttaatttgtttcacgaaattgaatgcttctgccgcaccagaccaaggtgacaggattagtgcaggtgcaggcttacctgtatgcagtaattactatctgccggaatatttactcggcgctggcactgctgattctgaattctgtatagaggctctcagctccaggc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0519700, RefSeq:Os04g0519700