Os04g0521600

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Revision as of 11:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0521600| Description = Conserved hypothetical protein| Version = NM_001059872.1 GI:115459473 GeneID:4336426| Length = 3159 bp| Definition ...")
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Gene Name

Os04g0521600

Description

Conserved hypothetical protein

Version

NM_001059872.1 GI:115459473 GeneID:4336426

Length

3159 bp

Definition

Oryza sativa Japonica Group Os04g0521600, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26506715..26509873

Sequence Coding Region

26506986..26509015,26509188..26509314,26509432..26509533,26509675..26509731

Expression

GEO Profiles:Os04g0521600

Genome Context

<gbrowseImage1> name=NC_008397:26506715..26509873 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26506715..26509873 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgagttcttcatcgggctcgaatcccggctgcggcgctcggtgaaggtggcggactccgtcatgatggggctcgtgaacgccgccatggaagacgcctacaagaagagcctctggaaggacggcgacctggagcgcctcgtccagaagctccgcttcgccgagctcgccatcatgcagctcgagtggagcctccgcttcgtgcgcggcgagatggagtccggctccggcggcggcggcgacggcgactgccacgagcagctgctcgacgacctcctcgagacgcgcgaccggatccaggcccgcctcgacgaggccgagctcgccgtcgccgacaaggaccgcgactacatgctccggaagcacgaggagcttgcctcgtcgcgccgcgaggcggcggtgcccgccgtctccggccgtgccagcgcgctccgccgggaagccgacgacgacgagaaacgccgcgtgttcggggagctgaagggctcggtggaccggcagatggcgaggatgaggttcaggctcgaggacgcgcggtccacgctcatggcgctcatggagacggtcagcggcgaggcgtcgccgatggcgaggctgcaggaggccgggcacgagggcgacggggtgaaatgcttgtcaggattctacagcatggcgcagctgctcatggagttccaggagatggtcctcgacgccggcgcagtgagcgacagcgtcacatcctcgttcgagttcatggagaggtccgtctcctcgttgaaggaggccatggacgagcagcagtggctggctaacgtcgagaaggagatgtacgcagcgaccatcaatggttttctcagagagatcagtgcgggatttccagttctgaatgattgttcttctccgggagagaggcagccacctactgagaatatttgggaggaaactgaacatctgaaggaaaaaaccgagcacaatcagaagagcctgaagggagatcaatgcgggatatctggttctgaatatctgacaacaacaaggcctgcggcaacagggcaatgttattcagaagagcctagcatctgtcatgaggaggttgagaggcttatagaagaaaagattgattcggagatcagatgtgaactgcaacatgtgttacattcagaaatattcagagacttggtgaggaaattggctgttctggatgttcagaagctaactgaagaaaatggtgaactgaacatcagagttgaactactctgtgaaatatatactacagtatttaaagatttggtgagtaaactaagttcagaatctgctgaacattttatcaggaccttcatcaaagatgaagtagaagctgtcatttttgcccggactttaaaagaaattaagagtgtgactgaaatggttcgcagtgagaagcatatcaaggaagaaaacaattgcagttttcctggggaaatagaaaagggtttagaacaaaatattgattttaatgtgctcagattcccagatgaaaatgcatgcaccaataatttgggaagattcagtatgattggcaatattgaacaactatatactatgaagatgcaaactagtggtgctagtgaagataaatgtacagattattatcaggtacctcttgagaaagagattttaagcagccctggtaattgtgacaggcaagattcagaagaaaattatctgctagctgaaatatcaacaggaaaagatggtgtttctgatgcatggaatggcaatgttgagcagtctttgcagcaacaggatcataggaagctgcacgtgggagacacagctttaaatctgagcatacctcctgaagaagcgaatacagagaatgccgaaatgaccttgattcttaatgagaaacttgatgtgattcactcaacaggttcaaattccatgcttgctgaacaggatcactttgatctgcaaatggctctagtttcattcactggtttccaggaagtgttcatgaattttgaagctgttacctgcgaaaagttagaaacagctatgctgagattgaattatttgaaaaagcaacagggaaatctgattgaacagatgcgctctcttaaaatgagcgaacagagttatcagatagctttcatcaggcgatgccacgatctccaaactgcggaagcagaggtggatctgcttggtgatgaggtggaactgcttcttggacttctcaggaagacatataaagcgttggatcgctattcaccggttttagaacactatctcggggttagggagatgctgaaactgcttgggaaggagctagccctgaggcatcaggtttag</cdnaseq>

Protein Sequence

<aaseq>MDEFFIGLESRLRRSVKVADSVMMGLVNAAMEDAYKKSLWKDGD LERLVQKLRFAELAIMQLEWSLRFVRGEMESGSGGGGDGDCHEQLLDDLLETRDRIQA RLDEAELAVADKDRDYMLRKHEELASSRREAAVPAVSGRASALRREADDDEKRRVFGE LKGSVDRQMARMRFRLEDARSTLMALMETVSGEASPMARLQEAGHEGDGVKCLSGFYS MAQLLMEFQEMVLDAGAVSDSVTSSFEFMERSVSSLKEAMDEQQWLANVEKEMYAATI NGFLREISAGFPVLNDCSSPGERQPPTENIWEETEHLKEKTEHNQKSLKGDQCGISGS EYLTTTRPAATGQCYSEEPSICHEEVERLIEEKIDSEIRCELQHVLHSEIFRDLVRKL AVLDVQKLTEENGELNIRVELLCEIYTTVFKDLVSKLSSESAEHFIRTFIKDEVEAVI FARTLKEIKSVTEMVRSEKHIKEENNCSFPGEIEKGLEQNIDFNVLRFPDENACTNNL GRFSMIGNIEQLYTMKMQTSGASEDKCTDYYQVPLEKEILSSPGNCDRQDSEENYLLA EISTGKDGVSDAWNGNVEQSLQQQDHRKLHVGDTALNLSIPPEEANTENAEMTLILNE KLDVIHSTGSNSMLAEQDHFDLQMALVSFTGFQEVFMNFEAVTCEKLETAMLRLNYLK KQQGNLIEQMRSLKMSEQSYQIAFIRRCHDLQTAEAEVDLLGDEVELLLGLLRKTYKA LDRYSPVLEHYLGVREMLKLLGKELALRHQV</aaseq>

Gene Sequence

<dnaseqindica>272..2301#2474..2600#2718..2819#2961..3017#gtcttcccctccgtctccgatggccggagcgacgcctccgcagccttcggggttcggatctctccactccgtatcctcgcctacttgggttccgttctaccaccatcttttaggaccccttttctcgtcctcgcggtctccttgtggtcacctgaattgaaggattggggatttcgccttcctctccacgaactcaccttgccgcgcgtcgagggaggagggaattactaccaccgggtgactcgtggtttcgtacgcagaaggtggcgaaatggacgagttcttcatcgggctcgaatcccggctgcggcgctcggtgaaggtggcggactccgtcatgatggggctcgtgaacgccgccatggaagacgcctacaagaagagcctctggaaggacggcgacctggagcgcctcgtccagaagctccgcttcgccgagctcgccatcatgcagctcgagtggagcctccgcttcgtgcgcggcgagatggagtccggctccggcggcggcggcgacggcgactgccacgagcagctgctcgacgacctcctcgagacgcgcgaccggatccaggcccgcctcgacgaggccgagctcgccgtcgccgacaaggaccgcgactacatgctccggaagcacgaggagcttgcctcgtcgcgccgcgaggcggcggtgcccgccgtctccggccgtgccagcgcgctccgccgggaagccgacgacgacgagaaacgccgcgtgttcggggagctgaagggctcggtggaccggcagatggcgaggatgaggttcaggctcgaggacgcgcggtccacgctcatggcgctcatggagacggtcagcggcgaggcgtcgccgatggcgaggctgcaggaggccgggcacgagggcgacggggtgaaatgcttgtcaggattctacagcatggcgcagctgctcatggagttccaggagatggtcctcgacgccggcgcagtgagcgacagcgtcacatcctcgttcgagttcatggagaggtccgtctcctcgttgaaggaggccatggacgagcagcagtggctggctaacgtcgagaaggagatgtacgcagcgaccatcaatggttttctcagagagatcagtgcgggatttccagttctgaatgattgttcttctccgggagagaggcagccacctactgagaatatttgggaggaaactgaacatctgaaggaaaaaaccgagcacaatcagaagagcctgaagggagatcaatgcgggatatctggttctgaatatctgacaacaacaaggcctgcggcaacagggcaatgttattcagaagagcctagcatctgtcatgaggaggttgagaggcttatagaagaaaagattgattcggagatcagatgtgaactgcaacatgtgttacattcagaaatattcagagacttggtgaggaaattggctgttctggatgttcagaagctaactgaagaaaatggtgaactgaacatcagagttgaactactctgtgaaatatatactacagtatttaaagatttggtgagtaaactaagttcagaatctgctgaacattttatcaggaccttcatcaaagatgaagtagaagctgtcatttttgcccggactttaaaagaaattaagagtgtgactgaaatggttcgcagtgagaagcatatcaaggaagaaaacaattgcagttttcctggggaaatagaaaagggtttagaacaaaatattgattttaatgtgctcagattcccagatgaaaatgcatgcaccaataatttgggaagattcagtatgattggcaatattgaacaactatatactatgaagatgcaaactagtggtgctagtgaagataaatgtacagattattatcaggtacctcttgagaaagagattttaagcagccctggtaattgtgacaggcaagattcagaagaaaattatctgctagctgaaatatcaacaggaaaagatggtgtttctgatgcatggaatggcaatgttgagcagtctttgcagcaacaggatcataggaagctgcacgtgggagacacagctttaaatctgagcatacctcctgaagaagcgaatacagagaatgccgaaatgaccttgattcttaatgagaaacttgatgtgattcactcaacaggttcaaattccatgcttgctgaacaggatcactttgatctgcaaatggctctagtttcattcactggtttccaggaagtgttcatgaattttgaagctgttacctgcgaaaagttagaaacagctatgctgaggttggtacgtttcttcgataacttttcatactcatttttttttgaacgccggcaaaagctttgccttttatataacttttcatactatagcacacacggaggataatctcaaaattacatttgaagtgaagttaggtatgcaattgcaaactcagtagggatgattatgcagattgaattatttgaaaaagcaacagggaaatctgattgaacagatgcgctctcttaaaatgagcgaacagagttatcagatagctttcatcaggcgatgccacgatctccaaactgcggaagcagaggttagagacattgacactttttatctcagggggaaaacggcttagtactgattcccaataccaaaatgattcagtgcaataggaagatgctttatctttgtttgctctgaatgataggtggatctgcttggtgatgaggtggaactgcttcttggacttctcaggaagacatataaagcgttggatcgctattcaccggttttagaacactatctcggggtaatgttatgattttgtgccattatgagttagatttataaagcaaagctattgcagatactactgagtacggcattgctcgaatatctaaataatcatacctgaaatggtatagttgagtttgttcatttactttttcaggttagggagatgctgaaactgcttgggaaggagctagccctgaggcatcaggtttagtacagtgttgttcgtatcagtctgttgatcagtgaaacatatgcttcatacacccagattaacccatagacctggttcaggtgcatgtattttctttcgcttgtagcttgtttatattttaaagaaaacattaggatcagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0521600, RefSeq:Os04g0521600

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os04g0521600&oldid=16595"