Os04g0522500

From RiceWiki
Revision as of 11:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0522500| Description = Isopenicillin N synthase family protein| Version = NM_001059876.1 GI:115459481 GeneID:4336431| Length = 3646 bp| De...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0522500

Description

Isopenicillin N synthase family protein

Version

NM_001059876.1 GI:115459481 GeneID:4336431

Length

3646 bp

Definition

Oryza sativa Japonica Group Os04g0522500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26529263..26532908

Sequence Coding Region

26529471..26529716,26529897..26530239,26532285..26532772

Expression

GEO Profiles:Os04g0522500

Genome Context

<gbrowseImage1> name=NC_008397:26529263..26532908 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26529263..26532908 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggccttcgccgacatcgccatcgacccgcctctggccgacagctaccgcgcgctggcgctgctccgccgcgaccgcgacggtggcattgcgccgccggctgtgcagatggtcggctcgggcggcgccgtgctggagcgcgacctgccgatggtggacctggagcggctgacgaggggcggcgcgggggagaggaaggcgtgcgcgggcgccatggcgagggcggcgtcggagtgggggttcttccagctgaccaaccacggcgtgggccgggagctgatggaggagatgaggcgggagcaggcaaggctgttccgtctgccgttcgaaaccaaggagaaggccggcctgctcaacggctcgtaccggtggggcaaccccaccgccacgtcgctccgccacctctcgtggtcggaggcgttccacgtcccgctcgccagcatctccggggcggattgcgactttggagacctcacctccttaaggggcgtgatgcaggaggtggccgaagcgatgtcgcgggtggcgaacacggtggcagcggcgctggcggaggagctgaccgggcgcggaggcggcggggcatcggcggcgccgtggttccctgcggggtgcgacgagacgacgtgcttcctgcggctcaaccggtacccggcgtgccctttcgcggcggacacgttcgggctggtgccgcacacggacagcgacttcctcaccgtcctgtgccaggaccaggtcgggggcctgcacctgatgaaggactcccggtgggtggccgtcaggccacgccccgacgccctcgtcgtcaacatcggcgatctgtttcaggcgtggagcaacaacaggtacaagagcgtggagcataaagtggtggccaacgccaagacggaccggctatcggtggcctacttcctgtgcccgtcctacgactcgcttgtcgggacatgcggcgagccatcgccatacagggccttcaccttcggggagtacaggaagaaggtgcaggaagacgtcaggacaaccgggaaaaagattggcctcccaaactttttcaagcattcttcagtacaataa</cdnaseq>

Protein Sequence

<aaseq>MPAFADIAIDPPLADSYRALALLRRDRDGGIAPPAVQMVGSGGA VLERDLPMVDLERLTRGGAGERKACAGAMARAASEWGFFQLTNHGVGRELMEEMRREQ ARLFRLPFETKEKAGLLNGSYRWGNPTATSLRHLSWSEAFHVPLASISGADCDFGDLT SLRGVMQEVAEAMSRVANTVAAALAEELTGRGGGGASAAPWFPAGCDETTCFLRLNRY PACPFAADTFGLVPHTDSDFLTVLCQDQVGGLHLMKDSRWVAVRPRPDALVVNIGDLF QAWSNNRYKSVEHKVVANAKTDRLSVAYFLCPSYDSLVGTCGEPSPYRAFTFGEYRKK VQEDVRTTGKKIGLPNFFKHSSVQ</aaseq>

Gene Sequence

<dnaseqindica>3193..3438#2670..3012#137..624#atcccagcagcattcgtcgacgcgcgctctgcgatagccagaagctagcttagcatacgtgcaactgcgtgtgcgacgcgtacacggctgtacagacacagataagcctctcgcctacgtagacgtcttcccgaccatgccggccttcgccgacatcgccatcgacccgcctctggccgacagctaccgcgcgctggcgctgctccgccgcgaccgcgacggtggcattgcgccgccggctgtgcagatggtcggctcgggcggcgccgtgctggagcgcgacctgccgatggtggacctggagcggctgacgaggggcggcgcgggggagaggaaggcgtgcgcgggcgccatggcgagggcggcgtcggagtgggggttcttccagctgaccaaccacggcgtgggccgggagctgatggaggagatgaggcgggagcaggcaaggctgttccgtctgccgttcgaaaccaaggagaaggccggcctgctcaacggctcgtaccggtggggcaaccccaccgccacgtcgctccgccacctctcgtggtcggaggcgttccacgtcccgctcgccagcatctccggggcggattgcgactttggagacctcacctccttaaggtacgtacagtacgtactatgcttaattactagctcgtatatactcgttaatatacgtagtggagtagtgtacagtgtgcactgcagtactccatgttgctttttatatgttagcttggtttttcttaattagctcgctcgcgcaagcacactttagtcattttgatgaaacaggccggtgaggcgatccgtgagtatttgcatatcggcatatgcatgcatgtgacaagctggatatatgctaacaaaattggcaattaagttgtttttagttataactactcccttcgtcttaaaatatactagtaatttaggactagacgagacatatccaatccaatgaaactggagaagggattgtctagattcgttggactcgaatatatcttatctaattctagtgttgctatattttgaggtaggatagatctcatccagttttagattgatatattatatgatggaggtaggagtaacttgcggtttcacactcgtacgtacaagctctgtagctagctagaccgggccgtcacagttacagtgtcagcgtctaagtactagtactagcttagtacaaaaggcgctaacagggcactgctcatcagaaaaggaggtatctctgttaattgcgatcgttcacgggatatttctcgtgtacacgtactcgccgcgactgtctgacacatacgcgagcgagcgcgatcgctgctatattcgcgcgtgctcgctgtccttacgatcgaacaaattaagctataaaagtctctggggtctacaataagctccaagcgagcagcaaacttgcctgtcacctgtatatattccgctcatgtgagtcaatgagtgatgatatcatgtgtgcggtggcgtatgtgcccacgaaacatgcgtgccttttagtacactaaccgaatttaacgccttcgtgtccatcgaaccagcctaccaacgccgtcccccacgtcggtgatatatatactcgcttattaattactccctcattattttaatgtatgacgccgttgaccatttgttttattcgaaatttttgtgcaaatatgaaaatatttatgtcatacttaaaggacatttgataacgaatcaagtcataataaaataaatgataattacataaaatttttttaataagacgaatggtcaaacgttagataaaaagtcaatggcgtcatacattaaaatatggagatagtattatattgtgtgtcgtgtacattccgaggcgtgtctagctttcatacacagtgaaggaaatactgtgagaaatatctcgggcacaagaaatatctgagtcacacacgtaggcgtaggaggatgcataaatcggagttgtaacctctaatatataacctttcccgtctaaatcgagggtagatccagtaaattgagccactagctaggtcactgagcttatggatcctatgcttgctagcgacaccaatgactaacttgtatgaacattgacttgctactgattcctctttatatatagcgttaattgatatttggataatacgtttgactgtttatcttacttaaaagttagcgaaaaatatgtattttttatggcatattctattattaaaggtactttacgtgtcgtttacatatttatataatattttaataaaacatcacgtttaaatatcagcatcatctcgtacattctaaaaacagaggaatatttagttgaccctaccaaatcatgtccccttcacagttgctttgtagattaatctaaactgaccactaaagttggatggtgataaggtttctagcgtcgtatcaggttataaagaaatctaattaagcttctattagttctttatcggatcaacagtgaataacatatatataaccggtttccgttgtcctaccggttagccgagaggttattaacctggctgatcagtacttttactgttttactgccggttggtgcacatggactctagtacggattatgatcgagtggttgtactcgattactaacaagcggaggttgttgtggtggtgacggcgtgcaggggcgtgatgcaggaggtggccgaagcgatgtcgcgggtggcgaacacggtggcagcggcgctggcggaggagctgaccgggcgcggaggcggcggggcatcggcggcgccgtggttccctgcggggtgcgacgagacgacgtgcttcctgcggctcaaccggtacccggcgtgccctttcgcggcggacacgttcgggctggtgccgcacacggacagcgacttcctcaccgtcctgtgccaggaccaggtcgggggcctgcacctgatgaaggactcccggtgggtggccgtcaggccacgccccgacgccctcgtcgtcaacatcggcgatctgtttcaggtaacagtccgccgattagctcgctcgggcatcattgtgtgtaccagctttgaccaccaaggcgggagaaacagagatgtcatcagatcgacgtgtctttgtgtggatgcattgattttaactttcgatgtcccatgaggccatgaatcattagctaattaattctctgctctgctataggcgtggagcaacaacaggtacaagagcgtggagcataaagtggtggccaacgccaagacggaccggctatcggtggcctacttcctgtgcccgtcctacgactcgcttgtcgggacatgcggcgagccatcgccatacagggccttcaccttcggggagtacaggaagaaggtgcaggaagacgtcaggacaaccgggaaaaagattggcctcccaaactttttcaagcattcttcagtacaataatgatcgcatcaatgacagcaaccgcttgttctatatatgttcgttataatttatggtcgatgtgaactcgaccgtaccatcaatccatctcactgtacaattgtgtgtgcggtgttcggggttggaggttctttccttatcatttccgtggccttttttggtttgtagattgtaattggcaaggtagtactatacaagtgattaaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0522500, RefSeq:Os04g0522500