Os09g0250800

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Revision as of 07:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0250800| Description = Similar to ABC transporter| Version = NM_001069215.1 GI:115478169 GeneID:4346514| Length = 3056 bp| Definition = Or...")
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Gene Name

Os09g0250800

Description

Similar to ABC transporter

Version

NM_001069215.1 GI:115478169 GeneID:4346514

Length

3056 bp

Definition

Oryza sativa Japonica Group Os09g0250800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:4432408..4435463

Sequence Coding Region

4432408..4433058,4433844..4433930,4434024..4434212,4434375..4434503,4434817..4434903
,4435026..4435463

Expression

GEO Profiles:Os09g0250800

Genome Context

<gbrowseImage1> name=NC_008402:4432408..4435463 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:4432408..4435463 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgctcacggtgcgcgaggctatttactactcggcgcagatccagctaccggacaccatgacagtggcaaacaagctggcgcgtgctgaggacacggtgagagagatgggactcactagcgctctggacacgcgaatcggagggcggtcgagcaagggcattagcggcgggcagcagaagcgtctcagcatatgccttgagatcctgacacgtccccggctgctcttcctcgatgagcctaccagcggcctcgacagtgccgcctccttccatgtcatgagccgcatcacggacctcgccgctagggagggcatgaccgtcatcgccgtcgtgcaccagccatgcagcgaggtgtttgagctcttccatggcctctgcctactcgctgccgggagcaccattttctttggcccagcttcaacagctgccgagttctttgcttcaaatggctacccttgcccaccaatgaggaatccatcagatcatttcttgaggacagtgaacaaagattttgacaaggagagtgaagaaaaactccagtacgagccagctgttgcagatgaagcaatagatattttggtgaattcatacaaatcctccgacacttcggaagttgcaaaacaggaaatgcgtcaaataaacgaaatggatcgacggatgattggaagaaaccgagctggttttgttaccaagacacttgtgcttaccagacgttcatttgtgaacatgtatagagatattggatactattggttgcgactagccatttatgttgccataagtctttcccttgggatgatattttacaatgtgggctatggacctgattcagctcgatcaaggtcatcaatgctaatgtttattggcaccctgctaacctttatggcaattggagggttcccttcctttgtggaggatatgaagatcttcgggagggaaaggctaaatggacactatggtgtggtcacatttgtcatctccaatacattgtcatccaccccatatcttctccttattgctgtagtacctggtgcaattgcatactatcttactggcttacaaaagcagatcgatcattttatctattttgcactagtgttgtgctcatgcacaatgctagttgaaggcctgatgatgatcgtagcaaccattgtaccagattttctaatggggatcatcactggtgccggtatacaaggtattatgatgctcaatagtggattcttccaacttccaaataacctcccaaagatagtatggaagtacctaatctactacatctcctttcacaagaatgcactgcagggattttacaagaacgagttctcagggttagtcctccaaaatgacctagaaggacataaaacaattactagtgaaaaagttatcgttgagttatttcaagtggaaacagggcattcaaaatgggtggatcttgctatactttgtggaatgattgtcatctacaggctattgtttgtagtgattatcaaggttctagatatggccaagcccatgcttaggggggtgacgcttaggtgctacactaaatctgttatacatggcttagagtaa</cdnaseq>

Protein Sequence

<aaseq>MATLTVREAIYYSAQIQLPDTMTVANKLARAEDTVREMGLTSAL DTRIGGRSSKGISGGQQKRLSICLEILTRPRLLFLDEPTSGLDSAASFHVMSRITDLA AREGMTVIAVVHQPCSEVFELFHGLCLLAAGSTIFFGPASTAAEFFASNGYPCPPMRN PSDHFLRTVNKDFDKESEEKLQYEPAVADEAIDILVNSYKSSDTSEVAKQEMRQINEM DRRMIGRNRAGFVTKTLVLTRRSFVNMYRDIGYYWLRLAIYVAISLSLGMIFYNVGYG PDSARSRSSMLMFIGTLLTFMAIGGFPSFVEDMKIFGRERLNGHYGVVTFVISNTLSS TPYLLLIAVVPGAIAYYLTGLQKQIDHFIYFALVLCSCTMLVEGLMMIVATIVPDFLM GIITGAGIQGIMMLNSGFFQLPNNLPKIVWKYLIYYISFHKNALQGFYKNEFSGLVLQ NDLEGHKTITSEKVIVELFQVETGHSKWVDLAILCGMIVIYRLLFVVIIKVLDMAKPM LRGVTLRCYTKSVIHGLE</aaseq>

Gene Sequence

<dnaseqindica>2406..3056#1534..1620#1252..1440#961..1089#561..647#1..438#atggcgacgctcacggtgcgcgaggctatttactactcggcgcagatccagctaccggacaccatgacagtggcaaacaagctggcgcgtgctgaggacacggtgagagagatgggactcactagcgctctggacacgcgaatcggagggcggtcgagcaagggcattagcggcgggcagcagaagcgtctcagcatatgccttgagatcctgacacgtccccggctgctcttcctcgatgagcctaccagcggcctcgacagtgccgcctccttccatgtcatgagccgcatcacggacctcgccgctagggagggcatgaccgtcatcgccgtcgtgcaccagccatgcagcgaggtgtttgagctcttccatggcctctgcctactcgctgccgggagcaccattttctttggcccagcttcaacagctgccgaggttggtctatatctaatgtcatatatactggcaatcctcatatgcatcctttgtgtggccttacttgtgtttaattgatttttgcctctgtttttcacattgtatattaattttgtttgcagttctttgcttcaaatggctacccttgcccaccaatgaggaatccatcagatcatttcttgaggacagtgaacaaagattttgacaaggttaagttcactcacaattaatagagtatcataatttctttagataatggaaaatcatttacacctccggcttctgcacacaatatgcacacgagtacacgacgcaaccataaaagagaaaagaaaaaataaaggaaatggaggctatggaggtacagccaccatacgcccctcatcaaaactaaatgaatatcacaaattgaaacctttttaacccaccatacacacaaattgcacacaagtatggtaaagtacatgcctttctttgttcttgagatgttaagttgccttttaatttgctactaacacacaggagagtgaagaaaaactccagtacgagccagctgttgcagatgaagcaatagatattttggtgaattcatacaaatcctccgacacttcggaagttgcaaaacaggaaatgcgtcaaataaacgaaatggtttctattctaaactcttgtgcacatttatatacatgtacaaacactataataattgttcatcatattatatgaaaagttataattacataacttatataattatatatgtccatctcatatatatatcaaaacttatgtttaacatattcttttgttcaggatcgacggatgattggaagaaaccgagctggttttgttaccaagacacttgtgcttaccagacgttcatttgtgaacatgtatagagatattggatactattggttgcgactagccatttatgttgccataagtctttcccttgggatgatattttacaatgtgggctatggacctgattcagctcgagtaagtgaagataaaacctaaattgtctttgctagtggagtgtgcatgtattccaatgaaaatataattattaattaattttgtttctttcagtcaaggtcatcaatgctaatgtttattggcaccctgctaacctttatggcaattggagggttcccttcctttgtggaggatatgaaggtatttatgcatttatatgtatatatcagtaggagcaaacatgtatactgtttttgattttatgaaatttgactgtacaaaacgtgtagactaagggacataacgtctggaatcgattatgcatttccgctttgtgttattctgtatactctagtgcaaaatcatgatactgtacaaagattcaacaaagtagtttatcaacaggaataaactttctccatagagggaaaggataattttattcaacagattaacagagaaataacaaaagaataattcatttccaatttagtatttgcagaaatcatgaaaagcctcaaaaagtttgatagatggacgcgtgtgattttatatcagaaagacgtgtggaacatgtttattcaagataggttatttccaactctgattttaataaatccatatattatgtgatttctctagccatatgtttgatagatgggtgcgtgtgattttatattaaattaacatgagaatttctatcttttcttattaatgtgggaacttgtaggttttttattgaagtgtgagcttctaggagagccttcaacatgtatatataaatattaattccagtaattattcattgaaaattatagagtgacaactttcatatttttctaattaatttaaatagttcagatgatgcatgagaggatacatttcatgtacatatcaaacaattacattatacaacgttgatatttatcaaatgaatttgcatttgtgcatcacatttgcttaatgtacgtgctcttactgctcagatcttcgggagggaaaggctaaatggacactatggtgtggtcacatttgtcatctccaatacattgtcatccaccccatatcttctccttattgctgtagtacctggtgcaattgcatactatcttactggcttacaaaagcagatcgatcattttatctattttgcactagtgttgtgctcatgcacaatgctagttgaaggcctgatgatgatcgtagcaaccattgtaccagattttctaatggggatcatcactggtgccggtatacaaggtattatgatgctcaatagtggattcttccaacttccaaataacctcccaaagatagtatggaagtacctaatctactacatctcctttcacaagaatgcactgcagggattttacaagaacgagttctcagggttagtcctccaaaatgacctagaaggacataaaacaattactagtgaaaaagttatcgttgagttatttcaagtggaaacagggcattcaaaatgggtggatcttgctatactttgtggaatgattgtcatctacaggctattgtttgtagtgattatcaaggttctagatatggccaagcccatgcttaggggggtgacgcttaggtgctacactaaatctgttatacatggcttagagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0250800, RefSeq:Os09g0250800