Os10g0118700

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Revision as of 08:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0118700| Description = Zinc finger, BED-type predicted domain containing protein| Version = NM_001189081.1 GI:297727292 GeneID:9267812| Len...")
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Gene Name

Os10g0118700

Description

Zinc finger, BED-type predicted domain containing protein

Version

NM_001189081.1 GI:297727292 GeneID:9267812

Length

3032 bp

Definition

Oryza sativa Japonica Group Os10g0118700, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:1165077..1168108

Sequence Coding Region

1165355..1165407,1165503..1167663

Expression

GEO Profiles:Os10g0118700

Genome Context

<gbrowseImage1> name=NC_008403:1165077..1168108 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:1165077..1168108 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggacacagatgaaactgttgcttgtgagattaatcacactcaatctcaagacactaaaaccggagtgtcaactactggagtggtagatgcaagcaaggacaaggaggagcagcagcagtccaaggatgaagagaaagctgatgaagaatccagaaaaagaaaaccaatggctctaagatctgatgtatgggaaagtttcagcaaggtcaaacttgctaatggggacgagagggccaagtgcaagtggtgtaccaagctatttcattgcggctcaagaacaaatggtacgtcatccttgaaagctcatctaaagatttgcaaaaagaatcctaacaaaccagtagttgataatcaaggaactttgcaactgacaccatgtgatggcaatagtactcttggtactgtgaccacttggaaatttgatccagataaacttagaaggtgttttgctgagatgataattgaagatgaacaaccatttgtcctatctgagcgttctggtcttaggaaatttatgactttagcatgtccacgatttgttctgccatctagaagaacaatcactagagcttgtgttaaagtatatgaagatgagaaagaaaagcttaagaaattttttaaggacaattgtgtaagagtttgcctcacaactgatacatggactgctaagaacagccaaaacttcatgtgtgttacagcccatttcattgacaatgagtggaacctacagaagaaaattattggtttttttttggttaagggacatagaggggaggacattggaaaatcattagagaactgcttggctgagtggggcattgacaaggtttttacaataacagtagacaatgctagtgcaaacaataatgcaattaagtatatgagaagggtcttgaatgagtcaaaaggttgtgttgctgaaggagagtacattcatatgcgctgtgctgctcatattatcaacctaatagtaggtgatggcttgaaggaaattggtacatcaattcaacgtgtccgtgctgctgttaagtttatcagatgtggaacatctaggttggtaaaatttaagaaatgtgctgagttagccaaggtacagagcaaagcatttctaaacttagatatttgcactagatggaactcaacctatcttatgttaaatgctgcagagaagtaccaaaaagcatttgaaagatatagtgatgaagacccatactacaaattagaattagaaggagagaatggtccaggggtaccaacaagagcagattgggagaaggctaggaagatggctgattttcttgaacacttttatgacctcactctccgtgtttctgtacaaagtcgtacaacatctcacacttatttccatgagattgctgatgtattacttctgttgagagaatggtctcatagtgaagacaagttgagcaaggaaatgggtacaagaatgctaatgaagtactacaagtattggggagagaagtatggtgagaggcaaggggacagagagaagagaggagagaaagataagggggatcaactactcaacttcactgtcttcttctgtgttgctattgatcctagatacaaactatcaaattgcattagaatgggaattaaggtgatgtttggggatacagtaggagaaaaagtatgggaaacagtgaatacctattttcgtgctttgtttgaagagtacaaggaaatgtataccccaaaagataaggcaccacaacctactgaatctgaatctacagctgaaaccagcaaaagagtgagttgtaggtggatgtcagtaattactcagcaacttaacagtgagggtggaagtggaactatcaaatctgaggtagacaagtatctatcagaagataatgagccggacacaccaaaatttgacattctaaagtggtggaaggccaattcaacaagattcccaatattatctcatttggcctgtgatcttttggcaattcctatcacctcagttgcctctgaatcagccttcagtgctggtgggcgaactctagatgactttaggacctcactaaccccaagaatggttgagcgtcttgtttgtgctaatgattggcttcgtggaggaaactatgttagtgttgaagaggacagcgaacaaatggctttgcttgaggaagaacttggtgacctatctatttccaaggaagatactccagctgcaactcagtaa</cdnaseq>

Protein Sequence

<aaseq>MGDTDETVACEINHTQSQDTKTGVSTTGVVDASKDKEEQQQSKD EEKADEESRKRKPMALRSDVWESFSKVKLANGDERAKCKWCTKLFHCGSRTNGTSSLK AHLKICKKNPNKPVVDNQGTLQLTPCDGNSTLGTVTTWKFDPDKLRRCFAEMIIEDEQ PFVLSERSGLRKFMTLACPRFVLPSRRTITRACVKVYEDEKEKLKKFFKDNCVRVCLT TDTWTAKNSQNFMCVTAHFIDNEWNLQKKIIGFFLVKGHRGEDIGKSLENCLAEWGID KVFTITVDNASANNNAIKYMRRVLNESKGCVAEGEYIHMRCAAHIINLIVGDGLKEIG TSIQRVRAAVKFIRCGTSRLVKFKKCAELAKVQSKAFLNLDICTRWNSTYLMLNAAEK YQKAFERYSDEDPYYKLELEGENGPGVPTRADWEKARKMADFLEHFYDLTLRVSVQSR TTSHTYFHEIADVLLLLREWSHSEDKLSKEMGTRMLMKYYKYWGEKYGERQGDREKRG EKDKGDQLLNFTVFFCVAIDPRYKLSNCIRMGIKVMFGDTVGEKVWETVNTYFRALFE EYKEMYTPKDKAPQPTESESTAETSKRVSCRWMSVITQQLNSEGGSGTIKSEVDKYLS EDNEPDTPKFDILKWWKANSTRFPILSHLACDLLAIPITSVASESAFSAGGRTLDDFR TSLTPRMVERLVCANDWLRGGNYVSVEEDSEQMALLEEELGDLSISKEDTPAATQ</aaseq>

Gene Sequence

<dnaseqindica>2702..2754#446..2606#tcagtcgtcacgcccccgactcgtcactcggcgcagccgctagcccggccgccagccgcgcagggtgccgccgcagcgctgccgctgccctacctcgccgtcgcgggctcgaggcggcacgccgcacggccgcagcgccacactcccctcccctgagcagcagctgtaggccccggcgagccgcccgcgagcacaccgccccctgcgcccaaagacccaaaccctaactcggcggccggcaaacgggctgctggcggcgggccggcaacaccctcgtggagttctccgaccaagacaacggcggcgcggaccgagcagtcctcctatgtaagttcttcacttcttgttcgtttgttctagttgagtccatgttgagtgaatgagtgttgtattgctgttctatgttggtaagttctgatttagtgatttgaaacatttgatctagatgggggacacagatgaaactgttgcttgtgagattaatcacactcaatctcaagacactaaaaccggagtgtcaactactggagtggtagatgcaagcaaggacaaggaggagcagcagcagtccaaggatgaagagaaagctgatgaagaatccagaaaaagaaaaccaatggctctaagatctgatgtatgggaaagtttcagcaaggtcaaacttgctaatggggacgagagggccaagtgcaagtggtgtaccaagctatttcattgcggctcaagaacaaatggtacgtcatccttgaaagctcatctaaagatttgcaaaaagaatcctaacaaaccagtagttgataatcaaggaactttgcaactgacaccatgtgatggcaatagtactcttggtactgtgaccacttggaaatttgatccagataaacttagaaggtgttttgctgagatgataattgaagatgaacaaccatttgtcctatctgagcgttctggtcttaggaaatttatgactttagcatgtccacgatttgttctgccatctagaagaacaatcactagagcttgtgttaaagtatatgaagatgagaaagaaaagcttaagaaattttttaaggacaattgtgtaagagtttgcctcacaactgatacatggactgctaagaacagccaaaacttcatgtgtgttacagcccatttcattgacaatgagtggaacctacagaagaaaattattggtttttttttggttaagggacatagaggggaggacattggaaaatcattagagaactgcttggctgagtggggcattgacaaggtttttacaataacagtagacaatgctagtgcaaacaataatgcaattaagtatatgagaagggtcttgaatgagtcaaaaggttgtgttgctgaaggagagtacattcatatgcgctgtgctgctcatattatcaacctaatagtaggtgatggcttgaaggaaattggtacatcaattcaacgtgtccgtgctgctgttaagtttatcagatgtggaacatctaggttggtaaaatttaagaaatgtgctgagttagccaaggtacagagcaaagcatttctaaacttagatatttgcactagatggaactcaacctatcttatgttaaatgctgcagagaagtaccaaaaagcatttgaaagatatagtgatgaagacccatactacaaattagaattagaaggagagaatggtccaggggtaccaacaagagcagattgggagaaggctaggaagatggctgattttcttgaacacttttatgacctcactctccgtgtttctgtacaaagtcgtacaacatctcacacttatttccatgagattgctgatgtattacttctgttgagagaatggtctcatagtgaagacaagttgagcaaggaaatgggtacaagaatgctaatgaagtactacaagtattggggagagaagtatggtgagaggcaaggggacagagagaagagaggagagaaagataagggggatcaactactcaacttcactgtcttcttctgtgttgctattgatcctagatacaaactatcaaattgcattagaatgggaattaaggtgatgtttggggatacagtaggagaaaaagtatgggaaacagtgaatacctattttcgtgctttgtttgaagagtacaaggaaatgtataccccaaaagataaggcaccacaacctactgaatctgaatctacagctgaaaccagcaaaagagtgagttgtaggtggatgtcagtaattactcagcaacttaacagtgagggtggaagtggaactatcaaatctgaggtagacaagtatctatcagaagataatgagccggacacaccaaaatttgacattctaaagtggtggaaggccaattcaacaagattcccaatattatctcatttggcctgtgatcttttggcaattcctatcacctcagttgcctctgaatcagccttcagtgctggtgggcgaactctagatgactttaggacctcactaaccccaagaatggttgagcgtcttgtttgtgctaatgattggcttcgtggaggaaactatgttagtgttgaagaggacagcgaacaaatggctttgcttgaggaaggtaacatagaaaatttttatttccttccaaattctaatgtgcttcatgattcatacactattgactgttctaactgagatcatctattattttagaacttggtgacctatctatttccaaggaagatactccagctgcaactcagtaattcagtcctgatcagtgatcatttggagtcttggacacttggtttggtgtatgcaatgctgttgttgcctgttgggtgcctgctacggtgctacctgggactttatatttctctatttgaataatgaagaactcttgaatctatgtaactgtactcttgagacatgttgatttgtgtactgtgtgactactttgtgtaattctatgcagctgtgctgctggttattgcttgcttaaggatttgatatatctataatatcatatatgctgttgcttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0118700, RefSeq:Os10g0118700

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os10g0118700&oldid=1660"