Os04g0522800

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Revision as of 11:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0522800| Description = Photosystem II oxygen evolving complex protein PsbQ family protein| Version = NM_001059877.1 GI:115459483 GeneID:4336...")
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Gene Name

Os04g0522800

Description

Photosystem II oxygen evolving complex protein PsbQ family protein

Version

NM_001059877.1 GI:115459483 GeneID:4336432

Length

7935 bp

Definition

Oryza sativa Japonica Group Os04g0522800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26557397..26565331

Sequence Coding Region

26564106..26564354,26564943..26565050

Expression

GEO Profiles:Os04g0522800

Genome Context

<gbrowseImage1> name=NC_008397:26557397..26565331 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26557397..26565331 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattgtgggattgaattgaagggctgcatttgtcggatcaacaactgcgctgttgaactcttctcaatggaggaggacttggtgattgatgatgaggactcgtgggaccttcttgcgagggatcttcggttgaaggctacattcttgtacattgacctcggccgtgtgatttgctcctgtgagattgatgaacacaagaagatgctcaccggtttagcgaacaagtttttctacttcatggatgagttgacgaatgcagtgagcagcagaagcatccccctcatgcaggtgtgctacagtgatacgactcttcttctccgcgaggtgctctccgcccttgtgccctcccagtaa</cdnaseq>

Protein Sequence

<aaseq>MDCGIELKGCICRINNCAVELFSMEEDLVIDDEDSWDLLARDLR LKATFLYIDLGRVICSCEIDEHKKMLTGLANKFFYFMDELTNAVSSRSIPLMQVCYSD TTLLLREVLSALVPSQ</aaseq>

Gene Sequence

<dnaseqindica>6710..6958#7547..7654#aaggtagagccaagctgcgctactattccccctcttcctttttctacggaagacgcagtcacacgctcaggcaacgcaggtaaagaaaaagagaagaaaaggcaaggtacaaacttgagacctgttcctccgttgctttattaatcattatcccggtgcttacttcttcttaattaatcaatagcaattagtggatttgttaagctgctctaggggaattattgggggcagggggcagaccggaatagaacaagaaaactgttctctcgggttctcagcttcgattgcatcgatcggtctcgaaattaaaaaaaatttaaagggggggaggtaaacccttttttagtgggttgcggggaagcatctctacgaagagggaacatgttggagcgttgagctttcctctcatcttatctccttcgtggtggttttaaattgggggaagaagacgacgaggtaaaagcgggtttttgtagagagaagaaaatatcggatttcggtttgagtgcggattggtaatgcgggaggaatcggggatttttttgtgtgttcgtccctctcgattcttggttttggaccagttgattcggatcgtgtgctcgtgattttgatcaacttaacatggaaaatggccatccttcgctatctaatcaaccactattcctttctttcttcgcttaacttcgtttgatgcagaatgctgaatgccatgcctgtcccctccttcttctccaggcattttttttcatgtccatcagcttttctccctgatcggaatatctcctacttgattggaaaatgttcttgatgagaaattaattagagaaggctccaggaggttaggaacaaatatcatggaggtgctcctaaatccccatgggtttcttggtccctggaggttggagggaatatctgtcctctggtctctgccctttagcctttattcgtcctgttcctttcgttccattcctaaatcctattccagtcacgccttctccgtccacgttgccattacttcattaagccctcactgaacatggttaaatcatcttattgtaaattcatcgatcgaagttgtgttcattggtcaaagctcaataaaattctaggtgttgatcatgcctagaggccaatgggcaaagatagggaagagaaccatccgactaataattttgtttgtggcaatcaagctgctatctttgcctgccctcgtcctcttctggaaactggaacagcgaccgaagacaagaaaagtagaatggaatgtagggcccacacaacttagctgctcattgagcatacctgattttggtatttttgctgaccattgattgattcccataattacctagagaacttgttgagttatgtatgtgttggtccatgaggcccatatactactcatatgtacatgtatataacagagttagagaaatgaaaaaagtagtgaagcttctagagaaaaattcccaaaacttcatggtatcagagccaatcggctggtggctggcgacggctaaaccctagcctcgccggagcttgtcgaggcgtgcagagaggtgctgagggagctgcgctggcagagctgcgcgtgtacgcggcgcaggagcgcgtggagctccaggtgaggagggaaacgctggtgctggagctcccggcgaggacgcagcggcgtcaacggcggcaggcagagccaacggcggccgcgcgcggagggagctgctggttgtgaggacggcactgctggtgctggtgtgaggatttggtgagctgctattgctgttctgttgctgaggcagagaagatcgagctgaggatttggtagtgtgctgttgctgctgaaaggaaaaggggaacacaaatttggtaagtgtgttgttgctgttgctgttgagcgagcagaggaattgtttgccggttgtgctattggtgtggcttgtgtgtgctgcggcaaggaggtgagcttgtgagtattgtactcctgtgtgtggttgagaaaggaagaaaaagaagggagtattgctgctggatctgttggtggtgtcgtgtgtgctgaagattacaggtgcagagagcaatagcaggtgaggaaagctgtagctagcttcatctagaagggaagaagcggctttggtgttggaaattaattattgtcaagaagtaaggcaacaggttgtgcaaggtgaatgtgaagttagtgcttcagattggcaggcaaccaacccaaattcgtgtgtgcgagaacacagtccaagcctcggcagtcacagagagggagaggggtgctgctgtgtcgagttccctgatcaggaggaaagaaaaccaggggacgttgtcttcaaggtgttagaatagagtgagtttgtaaaaaaaaaaaaaaaaaaaaaaggaatggagggaagtcaaggaattgaacaactgcttgcgaaaatggctgtagaaatacaagaaataagggaaagaatacggaaggagagggagaaaacaacagttcttggcaaccttgtcaacctcgcgcatcccatgcagatgcaggtacctcactcaacctggatattagactctggagcatctagacatgtaacaggtatgccaagtgagtttgtgtcatttactccatatccacccacatataaagaaactgttcagaccgccgatggtacttcacagcctatcaaaggtgtgggaagagtacagtgcactccatccattacattatcatcagtgttatatgctccctcctttccagttaatttggtatcaataagttctttggttgaccatatggattgttgggttactcttgatcgagaaaattgcctaatagaagagagaagaacaggaaggaagcttgggattggcattaggcagaacggattgtggtacttagatagaagcggaacaaataaagcactatgtagtgcattggcagttggtacaagtgaagaggaagctagattgattctccagcattgtcgattgggccatatgtgttttgaaactatgaggaagatatatcctgatgagatgagtaaggtggacagaagcaaactagtatgtgatgcatgtgaatatggaaagcatacaagagctacatatataagcagaggacttcggagcatatcaccctttatgttaatccactctgatgtgtggacttcccctattgtctcggtgagtggaatgaagtactttgtgacttttattgattgttactcccgaatgacctggatatatcttatgaaacataaaaatgaagtactaaaatgcttcaaggacttctacgcatttgttagaaaccaattcaacacatgtgtcaaaattatcagaactgataatgggaaagagtatgtgaacaatgaatttggtagtttcctttcgatagaagggatactacatcaaacttcttgtcctgacacaccaccgcagaatggggtggctgagaaaaagaatcgccatatcttggaggtggcacgttcactcatgtatactatgaatgtaccaaagttcctctggagtgaggcggtcatgacagctacatatcttatcaatcgtacaccatcaagaatacttgggatgaaggctccatatgagatggtatttggatgtaatgaatttattgttccaccaaaggtgtttggatgcgtatgctttgttcgagatcatagaccttctgtgggaaaattggatcccagagctatcaagtgcatatttataggttactcatctggtcatgaaaggatacaaatgttggagtccatctgagaggcgaacatttgtaagtatggatgtcacctttagagagtctattcctttctatggagaaatgacaagatttgagttatttgttttctgatcttgacaatccaatcatgagtgangttaggtatgaaggggttaatgaatnactaggnatggangtaggnggatgaatnaaagaggacgaaggntgttattgggncaaatcccatgccctatggaanactccacatgagcagaattggaggaaaccacatgaagaagaaaatctacaggtttacacaaggagaaagccaaggtccttggagacacaacaggtagaacaacaacctctaacaattgataggaatgagatggtggaacaacatcaacaacctctagtcattgatgaaataaatgatcaatcttcttatcagtcagatcctatacaagagaataccgagacagggggagaggagagtgaaatatcaggagaggaatctaacttgcctattgctaataggaaagggataagaagcacggcaggaaagccccctataagatatggctttgaggaggttgaggaggaaaatgggaatgacatagctaattatgtgtcatattcatctttatctcctgcctatagggcttttattgcatcatttcaatccatagtgatcccaaaggattggagagaagcgaagaatgatccaaagtggcatgaggcaatgatggaggagatgtcagcacttgagaagaacaagacctgggagcttgtaccttttccaacaggtaagaaggtggttagttgcaagtgggtgaatgctgtaaaacaagatccatttgggaaagtagaaaggtacaaggcaaggcttgtggcaaaagggtacagtcaaacatatggaatcgattatgatgaaacctttgcacctgttgcaaagatgagcacagtgagaaccttgatatcatgtgcagctaactttgattggccactataccaactagatgttaagaatgcatttttgcatggagatcttcaagaggaagtttatatggagattccaccgggtttttccacctctcaaactaaaggaaaggtattgagattgaagaaatccttgtatggccttaagcagtcaccaagggcttggtttgatagatttagacgtgcaatgtgtggcatgggctacaaacagtgcaatggagaccatacattgttttatcgtcaccgtggaaagaagattgccatcctggctgtatatgtggatgacataattattacaggagatgacactcaagaaatagctcagttaaaagagaatataagcaaagaatttgaagtcaaagatcttggtcagctcaaatattttttgggcattgagattgcaagatctcctagagggatagttctttcacaacgaaagtatgtattggatctactttgtgacacaggtatgctcggttgccgacctgcctctacaccaattgagcaaaatcataagttatgtgctgaattaggagatccagtgaataaagaaagatatcaaagacttgtgggacgactgatatatttgtgtcataccagacctgacataacttatgctgtgagtgttgttagtcgatacatgcatgaccctcgaagtggtcacatggacgcagtatatagaatcctgagatatttaaaagggagcccaggaaaaggcttatggttcaagaaaaatggacatctaggtgtggagggctactgtgatgcggactgggctagcagccttgacgataggaggtcaacctctggttactgcgtatttgttggtggcaatttggtctcttggaggagcaagaaacaaccggtagtgtctcgctcaactgctgaggcagaatacagggcaatgtcagtgagtttaagtgagctgttatggttgagaaatcttctttctgagttaaagttgctaatgaatattcccatgaagtgtggtgtgacaataagtcggctattagcatcgctaacaatccagttcagcatgatcgaacaaaacatgtggagatagatcgtttttttatcaaggaaaaactagatgaagggattttgaagctaggttttgttatgtcgggggaacaagtagctgactgtttaacaaaagctttaagtgttggggagtgtacttcatcgtgtaacaagatgggcatgatagatatctatcgcccatcttgagggggagtgttgagttatgtatgtgttggcccatgaggcccatatactactcatatgtacatgtatataacagagttagagaaatgaaaaaagtagtgaagcttctagagaaaaattcccaaaacttcagaactagtattgggttgtttggataccatctcatcagagtaccatgtgttgagcttcactagagactttgtgaaaaaaaattacttcagaagtcactctagtttatatatcttacagttgcaaacgtctactttatcacaacctcactttttttttcttacaagcagtttcttgtggtttcccctattgcacctttggctgagtttagttccaaaatttttcttcaaacttgcaacttttccatcacatcaaaactttcctacagacacaaactttcaacttttccgtcattccaattttaaccaaacttctatttttggcgtgaactaaacacaccctttcttgatctgcaagctccaggcaatgcgccaattacacagaagtctcctcttttcccaagagcgttatcctctgactaatattgtatcttctcattgactagttcgcccaattgctacatggcttcctttcttttacactttgttgcatttgttgcttctaaacatagtacaagaattagcttcctctttctcttctttacttgatgatgcgccttgatgctataaatatatctgataggtcttgaccattccaagcacaacttgggataagacgaagtagtgccaaattatggattgtgggattgaattgaagggctgcatttgtcggatcaacaactgcgctgttgaactcttctcaatggaggaggacttggtgattgatgatgaggactcgtgggaccttcttgcgagggatcttcggttgaaggctacattcttgtacattgacctcggccgtgtgatttgctcctgtgagattgatgaacacaagaagatgctcaccggtttagcgaacaagtttttctacttcatggatgaggtgagcattgcttccctcgttcttggcaagctttcgcccaaagcatgtgtctctttttttatatataaaagcatgcctcttatttcattgcaaatttagtaattcacacgtatttgaagagctcaaggatgcctttgattatatataacactcctgttttagtcatttcctgtaataatgctttgtcatttcacattaaacgtgattggttactccatcctatctagctacaaattttatatagtttttattcataatttgttatctaagtcaacaactcaacattttaagctaagctaatgggttgtaaggggagaaggttatcttggaattttctggatgtttaatgtaaatggataattatgcttccttaaaaaaagttgttaacgtccttttcgtgtttttgttttagctgtttatggttcatgaatcatgactaggctcacccaatagaattagaaaggtgctcctagcccgttcggcaatgtacttatttgtcaaatcagttatggacaatcaacacacttgattaatttgtggatatattcgctgtctatctaatttaagatgcctttgcacaaatggcagttgacgaatgcagtgagcagcagaagcatccccctcatgcaggtgtgctacagtgatacgactcttcttctccgcgaggtgctctccgcccttgtgccctcccagtaatttgggcctaattcaagattagatgccccctgcaaggctagtattcgctctgcttctgcagcatcgcaatgtatggagcaggcgagggtaagatctgagagcctcacattttcttggaagcaagaaacacccagaagaggatggataaggaaaatgtgagaagaatgaggtgcagaatcaccctcacctatgtacatatctttaatcagcttcagagttggaacttggaagcactttaatggattagcatccggtttgcaccaatgagatgcacttctctg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0522800, RefSeq:Os04g0522800