Os04g0524400

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Revision as of 11:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0524400| Description = Conserved hypothetical protein| Version = NM_001059884.1 GI:115459497 GeneID:4336440| Length = 3923 bp| Definition ...")
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Gene Name

Os04g0524400

Description

Conserved hypothetical protein

Version

NM_001059884.1 GI:115459497 GeneID:4336440

Length

3923 bp

Definition

Oryza sativa Japonica Group Os04g0524400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26631407..26635329

Sequence Coding Region

26631419..26631889,26631979..26632077,26632163..26632383,26632598..26632667,26632799..26632878
,26633083..26633147,26633523..26633716

Expression

GEO Profiles:Os04g0524400

Genome Context

<gbrowseImage1> name=NC_008397:26631407..26635329 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26631407..26635329 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccttcgccgcctccccttccctctcctccctcgccgccgcttcctcctcctcctccgcggcctccgacgccgccgtcgcgatctcctcctcctcctcctccccatcaaacccctctcgcgagctctcacccaggctattctccccactgccccccaaaccccattccctctcctgctccgggacacaagccccacgcgccaccaccggcgacggatcgggcgccgcgggggaccgcgggagcggctccggaggaaacagcggcaagggtggaggcggcggcagcggcagcggcggcggcgacgacgacgacgactacgaggaggccgagttcgggcccctgctcgggttcgatgaggtgctgcgcctcgccgcggcacgcggcgtctcgctcccggccgacatgatggaggcggccaaggatgctggcatccgggaagtcctgttgctccgctacttcgatctgcaggcagggccatggcctctagccgcgatgatccgggcattctcgatgctccgcaaccgaatgctagccgacccatcattcctcttcaaagttggaacagaggttgtgattgactcgtgctgcgccacgtttgcggaggtgcagaagaggggggaggatttctgggcggagtttgagctgtacgccgcagaccttctagtgggagtggtagttgatattgcacttgtggggctgttggctccgtacgtgagatttggaaaggcatctgcttcgactggtccttttgggagattcaacaggatggctggatctttgccaagcagtgtttttgaagctgaaaggccaggctgcagattcacagttcagcaaagaattggaacattcttttataagggtgtcttgtatggctcggttggatttgtatgtggtatcattggtcaaggaattgccaatatgataatgactgccaagaggagtgtcaaaaaatcagatgaggatatccctgtccctccactaattaaaagtgctgctctatggggtgtgttccttgctgtatcatctaatacgcgctatcagatcatcaatggtctggagcgagtagttgagacatcacctattgcgaaacgtgtgccacctgttgcaatggctttcactgttggtgtccgttttgccaacaatatctatggtgggatgcagttcgttgattgggcacgatggagtggtgttcaataa</cdnaseq>

Protein Sequence

<aaseq>MAFAASPSLSSLAAASSSSSAASDAAVAISSSSSSPSNPSRELS PRLFSPLPPKPHSLSCSGTQAPRATTGDGSGAAGDRGSGSGGNSGKGGGGGSGSGGGD DDDDYEEAEFGPLLGFDEVLRLAAARGVSLPADMMEAAKDAGIREVLLLRYFDLQAGP WPLAAMIRAFSMLRNRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGEDFWAEFELYA ADLLVGVVVDIALVGLLAPYVRFGKASASTGPFGRFNRMAGSLPSSVFEAERPGCRFT VQQRIGTFFYKGVLYGSVGFVCGIIGQGIANMIMTAKRSVKKSDEDIPVPPLIKSAAL WGVFLAVSSNTRYQIINGLERVVETSPIAKRVPPVAMAFTVGVRFANNIYGGMQFVDW ARWSGVQ</aaseq>

Gene Sequence

<dnaseqindica>13..483#573..671#757..977#1192..1261#1393..1472#1677..1741#2117..2310#gcttccgctaccatggccttcgccgcctccccttccctctcctccctcgccgccgcttcctcctcctcctccgcggcctccgacgccgccgtcgcgatctcctcctcctcctcctccccatcaaacccctctcgcgagctctcacccaggctattctccccactgccccccaaaccccattccctctcctgctccgggacacaagccccacgcgccaccaccggcgacggatcgggcgccgcgggggaccgcgggagcggctccggaggaaacagcggcaagggtggaggcggcggcagcggcagcggcggcggcgacgacgacgacgactacgaggaggccgagttcgggcccctgctcgggttcgatgaggtgctgcgcctcgccgcggcacgcggcgtctcgctcccggccgacatgatggaggcggccaaggatgctggcatccgggaagtcctgttgctccgctacttcgatctgcaggtaatccgaattgcagaagaattgtttgtgagaaggtagaaaaaaaatgtttgtaagaatgtagtttcgtgcccctttttatatcttaggcagggccatggcctctagccgcgatgatccgggcattctcgatgctccgcaaccgaatgctagccgacccatcattcctcttcaaagttggaacagaggtgcgcgcgtgattggtttgttgtttaagctgaggagtttcgattgtagtcctacggagtgttgaggattttgcattcgatgcaggttgtgattgactcgtgctgcgccacgtttgcggaggtgcagaagaggggggaggatttctgggcggagtttgagctgtacgccgcagaccttctagtgggagtggtagttgatattgcacttgtggggctgttggctccgtacgtgagatttggaaaggcatctgcttcgactggtccttttgggagattcaacaggatggctggatctttgccaagcaggttaaaagttatttcttctgttattaagtgcctatagaaattggtagtgaattatggaaataaactaaaataaacatttgtctagtttgttgttccatggaacatagcgtgagaaagaatgaaacagtgcagttgttcatgttgtgagtccgcaactgcagcagcagtagtattaattggattttggtttcattctgtttggactctcttgcagtgtttttgaagctgaaaggccaggctgcagattcacagttcagcaaagaattggaacattcttttataaggtagcaaatcttatatgatatgtgtttatcctgaatttggattgatctatatcagatttataatttctaactgctggagcatcatcacactgtttttggattggcccaactgcttatcgttttatttgcagggtgtcttgtatggctcggttggatttgtatgtggtatcattggtcaaggaattgccaatatgataatgactgccaagaggtactgtctatgatattgttcttttgtccaaaatttgtaatatttttgttcaattgtacactaattccataatcagtccatatgctgtactttcatacatatgccatgttgtgttcatgctattgttgatgaacatttttatggattatattttctgctttgttgactgtgttatgctgtattgctgtttcttttttttttcaggagtgtcaaaaaatcagatgaggatatccctgtccctccactaattaaaagtgctgctctatggggtatgactaccatctgtttctatttgtattactttatttggtccaagttatatgcacaaacagatagatgtttcgatgcgatgatgtctactagagaggcatccatcagcagatttaacatagagaggggcttatatctttatttaatggctgaagtttctgctaactttggtttatgatgtatttcaatatttatgtcctatgtcagataagatatgctaagatagcaaaagttcatattattctttttcctactacagcaattgcttatgttatctttacgtgtgaactagcataaggcacgttctttattcctgtattcatctgacaattgttttaattaatattcatctgacaagttgtattgacatataggtgtgttccttgctgtatcatctaatacgcgctatcagatcatcaatggtctggagcgagtagttgagacatcacctattgcgaaacgtgtgccacctgttgcaatggctttcactgttggtgtccgttttgccaacaatatctatggtgggatgcagttcgttgattgggcacgatggagtggtgttcaataatggtgagtactcctgtttgaactgtttttttttatcaaatattatttgaaatcttgaggttgcttgcaaaaaaggaaacttacctttgttcggagtagtcattttgcgcatgtatgcaatgtagactatatctgtatatctgctgatgtacaggaatctctctttgtaaaaagtagcattccttcatttgcagtagtagataatctgaatttaagtcttagtgcctccatttcttcaagatagccctagatcatcagggctagcatgaactgacaaaattttatgttaaatccgtagctagaagagtacaattgtgtgtgtgtgtgtgtgtgcgtatgtggttttttttttttgttgcatgggagaagagtacaattgttgatgcgtaaagtcaggtatggcatgggtatcttgagtggttgcacaaactgtaggcacggtgtagctggccaatctgcaactttgggcctcaagcatatgtcttctactatggataatctggaactatgaaatgacggtcaaattcgaaatgaaagctaaaaacctgaaagcctgtggtctgaaaatacttgtggttgcaacttctagagatttttcaatgtcatttaaatacttggtagatgattaacatttaaatttagtcaacagctgctatatttaaatatatattcatacctagcttatgtttaccttggaaaataagagtaagatcaactctgtgtactagtagctcagttgttgacattgcatgctttggggctatgtctatttgtcttgcatcatttccaagattttggactagctctaattatttaattttgcagcttatgaaacagcattttatttttgcctcaagcatgaaaaatgggcgaagcttttgctttctgttctttacattctttgggacagaagaagcagcaacagcagcagctatgtggaacagtggaggctaggaactcatttgcttgtttgaagagcgtatgaagcacgtcgcatcacaaggttggcatgcatgtgccaaaaaaatattttattttaactgctccctcccttgtttagctgtttgggacaaacatgaaagttgttcatcaaatgtgcattaatgattgatacaacacttttgtcttacagcaagtaaggaccggatatgtccctcaaataatttctctgtttcgtgctatacatgtgtggagtacatctatgtcttggggtattgccaaattttgggtccacctgttcgtcgaatttgtaggtgacgagtgaggcggagaggcataagactgatgatgaagcagataggggagaaactggataatcagattctggaggcagataggtcatgctcgtgcacattttgtacatgcatggctcgcctggcgctggagcacctgaatcagtgctagtgttgtgcactctctttcagtttcaacttcagacgagtactcgagtgaaggacacaggtacaattgacaacaatcttactgcaacttaagcctatcatcatgcatatgcatccagagcagatcagatcgcagagaataacgtaaacaagataatttattcccattcttgtctctgtacacacttatttatctactatcgtatagtatgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0524400, RefSeq:Os04g0524400