Os04g0527700

From RiceWiki
Revision as of 11:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0527700| Description = CHCH domain containing protein| Version = NM_001059904.1 GI:115459537 GeneID:4336462| Length = 3121 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0527700

Description

CHCH domain containing protein

Version

NM_001059904.1 GI:115459537 GeneID:4336462

Length

3121 bp

Definition

Oryza sativa Japonica Group Os04g0527700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26770615..26773735

Sequence Coding Region

26770719..26770845,26771715..26771746,26771867..26771992,26773271..26773441

Expression

GEO Profiles:Os04g0527700

Genome Context

<gbrowseImage1> name=NC_008397:26770615..26773735 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26770615..26773735 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtcaaggtctgagccagcccgcgcaggcggtggaggagccttctccgcctgccgtcgaggcggcgccgtcgtcgtcgccgtctcctgccccggcgccatcttccctcgaggcgctcgccgcagaggctatgtcatttgacgaggatggcaatgagtcaattgatgtgaaggtacagaaagcactggactgtccatgtgtagctgagttgaaaaatggtccttgtggaagtcaatttgttgatgcgttctcttgcttcctgaaaagcacagaagaggaaaagggatcagattgtgtgaagccttttatcgcactgcaggactgcatcaaaatcaatccagaggcgttttctaaagagattttggaagaagaggagaatgacgaggaggctgagaagtccaacctgaaagttagagcaccagcatggtccagagaatctaagccaaagctttga</cdnaseq>

Protein Sequence

<aaseq>MGQGLSQPAQAVEEPSPPAVEAAPSSSPSPAPAPSSLEALAAEA MSFDEDGNESIDVKVQKALDCPCVAELKNGPCGSQFVDAFSCFLKSTEEEKGSDCVKP FIALQDCIKINPEAFSKEILEEEENDEEAEKSNLKVRAPAWSRESKPKL</aaseq>

Gene Sequence

<dnaseqindica>105..231#1101..1132#1253..1378#2657..2827#gctccaactcgccgcgccgccgcttgctcccgttctcgccgtcgcagcccgggaagacgagagagtgtggccgccgcctgcttcttctctagcgctacacctcgatgggtcaaggtctgagccagcccgcgcaggcggtggaggagccttctccgcctgccgtcgaggcggcgccgtcgtcgtcgccgtctcctgccccggcgccatcttccctcgaggcgctcgccgcaggtacatgccaaaaactctgaatattgtgatccaatggcgattttctcgtgcactcgtgacttttcattgagatgcggtagccgcgctagattgttgtgttgctttggatttgggaagctttgagatgcagtagatagtgcagtggcaagaggtgtgtggttttaataccaaatttctgtgttcaatccctaacatgctcataatttcattcttaagaaaatgtttggagcgaagtctctccctccaaatctctctttttttagatcgaattcgagtatgtgattgtgcagggcaggccgtgtaccggatagtgaactgatgatagctgatatcttaccaatcattcatgccggaattgacaatttagatagattaaaatattaatgtcatgcacgtgatgtaataagtcaattacactgtaccttgtttcccccaaaatcttaatgcatcggcaggcaatccttttgtctgatccttttgtaagttaataacacccgggtccctctcaaaagaataagaacacccgggtcagaggagtcactgagctaatatagtattagtggcaatttcactactctcagttcctagcaagcttgctatctcaaaacccaggggtcttatagctagctccacaaggtggtaggctagccggcctaagtttgaagcttcaccccttatatttatttgatattaggtccttccctaatattcgcgtttctttttatctcaaaaaaaattgagtcaaaattactgcaatggccatcaatattatggacttctctctcttttttttccttaaaaaaatgcatcacttaagttctccatagtttctcatgctagcattctgaggttggattccttaaatgcagaggctatgtcatttgacgaggatggcaatgaggtatggtactttattttgcttttgacttttgagtgggatgcttatatatcactatcctatttgctttactatttcttggcaccctggatgatcagtgaacttagtattttgtgtattcagtcaattgatgtgaaggtacagaaagcactggactgtccatgtgtagctgagttgaaaaatggtccttgtggaagtcaatttgttgatgcgttctcttgcttcctgaaaagcacagaagaggaaaaggtcctatttctttctccatggcaccgagctgcttgcaatttgcaatgcaagaatgattcatgcacatcaccatggtgataatatattaatggtgttcatgaaaaacttagtcaacataagaatcacattaataagtattctaaaatttggagctaatatttacaaaaaaagttgttttatggatgcaattttctcatgtgcagtcttgctgatgggtagtgtaacctttctatcggttgccatatatatatttctatgtaatccattgtttttacagatatctgataatttccagctgatttgggcattcaggctgaagccatgccactgtaggaaatgtgtctgtgtttctttctattatacaaatataaaaagctccctcaagttgttcgttgatctaattgaacataaggtcaatcttttcctatgagcaaatcattttatgaccccaatataataaaagcacaaaaattctttgtctttttcctttgccactctttgcagtcatattctcctctaccaacaaattgttattgcccagtccaattgttcaccaaaagaccattatgtgtttatgcattttgagaatccatggaaaatcaaaatgtcacaaaaactgaagaacttcagggatctatgttgcattaaatgtttaaaactttcttgaaaattttgacatcagagaaattatgaggatgctatataagggtcttttaggtgcaaacttgatgggcaactgagtaactggacagtggtgccaaacaaggagaagtgtaagttttgaggtgaatcgaagtaatctggtcaggatttcacactacggcttggagttgggtcggtgttgtttgagtcaccttactccatagatgccacttctatcttagagaaaaggcttcctctcttatcagaagtgatagcagggccgtgataacaggagaattttttagcttgggttgctcacttgctctagcctcgatgggagagtgcactgcgtaacatcaccagtatgccttttccccaggtcaagttggtggcagaacagagattagggctgcaatgagtgcataaagaagattttctcaaatcaaattggttacacaacaatgttaatgtagggcagattcttttaattaaaggcacttattcggttacctgttatttgttcaaataaaatctcaagaactggctgttgttcacgtttggaagaatgctaagtttttgttcatcgtctgtttctccggaatagtaactacaattttggactctttgccttcgcagggatcagattgtgtgaagccttttatcgcactgcaggactgcatcaaaatcaatccagaggcgttttctaaagagattttggaagaagaggagaatgacgaggaggctgagaagtccaacctgaaagttagagcaccagcatggtccagagaatctaagccaaagctttgattagatggtgtggtgtttggctgatacactgatacaggcattcctccaccagtcgacacacaacatcaccttgtttcttctacgagtgcttccgtattagatcaattgtttttgagatggtggtacataaatttgagtcagcaatgaagcgtccaagacacttcggcggaaataagtagtatttccacaatttaatttacaacaaacacttactgttcaaatggagaactgacgaacttgtaatatgacgtcagttctagacggattatacgagtgggtaaagatcaaagttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0527700, RefSeq:Os04g0527700