Os04g0528000

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Revision as of 11:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0528000| Description = Protein of unknown function DUF789 family protein| Version = NM_001059907.1 GI:115459543 GeneID:4336465| Length = 39...")
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Gene Name

Os04g0528000

Description

Protein of unknown function DUF789 family protein

Version

NM_001059907.1 GI:115459543 GeneID:4336465

Length

3949 bp

Definition

Oryza sativa Japonica Group Os04g0528000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26780540..26784488

Sequence Coding Region

26780540..26780793,26781097..26781182,26781401..26781486,26781705..26781897,26782004..26782203
,26784366..26784488

Expression

GEO Profiles:Os04g0528000

Genome Context

<gbrowseImage1> name=NC_008397:26780540..26784488 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26780540..26784488 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaagtgctactgctgattccagatctggtattaagctttttgaagcttgtatcaattcgaatctgaggtccttccttcacagtgttacgccaactttggagccctacaccgttgccaagccaggcggctattctggtagagtgcccgagttaggtagatgcttcttccttgtagacctttggaaccacttctacccgttgagcgcctatggtgtcggtactccggttcgtctcccttccggtcaggaaattgagcagtactttgtgccgtatctttcagccattcagttgcacaccatctcagacttcacttcatgcaacgagataatggtcggcaataacttgtttgatgcgaacaactacggctggtgcagtgcggcagataactggaatggtcagtatgcaacaacatcattagcgaggtatgacagcccgaggtcaatgaatggagggccatgttttcagtactttgaatgtgattccccttatgaaaggatgcctctcgcagacaaggtgtatgagctgtgctataactttccacccctatcatatcttagcagtattgagctctctccatctagttggatgtcagttttctggtatcctataggccatgttcccgcgatgaacaagaaggacctgactacttgcttcttgacttaccatagcctgtcaacattagaagatcgtacgccgtttgacagcaaggacccgctgacgcttcccccaattggcctcgcgacgcacaagacggacggagatgtatggacaagcgcgaactccggcgaccaagagctgaccacctccctcgtcggcgcggcggactcgtggctgaagaagcttgacgtccagcatcatgacttcaattacttcctcaacagtaacaggaacctgatccactacaggtccttgaccgaagcaagtaccagtgcagtttga</cdnaseq>

Protein Sequence

<aaseq>MGSATADSRSGIKLFEACINSNLRSFLHSVTPTLEPYTVAKPGG YSGRVPELGRCFFLVDLWNHFYPLSAYGVGTPVRLPSGQEIEQYFVPYLSAIQLHTIS DFTSCNEIMVGNNLFDANNYGWCSAADNWNGQYATTSLARYDSPRSMNGGPCFQYFEC DSPYERMPLADKVYELCYNFPPLSYLSSIELSPSSWMSVFWYPIGHVPAMNKKDLTTC FLTYHSLSTLEDRTPFDSKDPLTLPPIGLATHKTDGDVWTSANSGDQELTTSLVGAAD SWLKKLDVQHHDFNYFLNSNRNLIHYRSLTEASTSAV</aaseq>

Gene Sequence

<dnaseqindica>3696..3949#3307..3392#3003..3088#2592..2784#2286..2485#1..123#atgggaagtgctactgctgattccagatctggtattaagctttttgaagcttgtatcaattcgaatctgaggtccttccttcacagtgttacgccaactttggagccctacaccgttgccaaggtacaaaccatcatgctatcttttaagaaaaagaaaggctgtgcttctgcttgtcaaattcttttctcctttgatttctgtatgaatcagttatgtttccatagaaattacaagaaatgaaaaatcccatttgaatggacacctaggttattggagtagttatatccatggaatacaaaggcatcaagcctatgaggctatttgattagcctgggagttggctccgagactgcttgtctatgcgatcttctctatctttttgatgaaaaggatatgcatctccagctttcctcttttttccccccttcatagaatggtttcttgttttgctagttaaattctttttctcatggtttgtcattatttcccttttgagatctactttagaaggtgggattttcacatgaatttggggggaaaatatatcttgttatctacatatgtttcccttctttcttcatctttgtttttattgttggcctatgttattggcccattttcccttgatatggtggttttccattaattttcttgatggtttataatacatctactaagatgtagatgccttaacattatcacgagtttccaagaaccaggaaaaactcatatccttttctaggttgtttacttcttcccctatagaatgcttggtatcttctcgctgggagatgttaagctatgtatgatcatactaacttgttttgcagtaagatttattacttgtggattggtgtctttgtctatgtcatccttctttgttattccacgcgtatgtaaagtggcatggattcaaaatactttttggcgcgagacatgcatggtgtcttcgtgcgaacttttggcgcgaaacacccatattgtaacgtatcactcaagtcaaacatttgcttttggcacgtgcgagacacgtgtcagattcagtggcggagccaggaatttaaccctatgggatcaattactattagtttgtatttaagtgaggtcatttctctatttttttttctgggtttatacatgaaaaatggtcagattgatagcatctttacgaagattctatgtgggatagaattgtagaataaccatttaacatggaaaatcaccatatgaaatggatgtctaaaatggtgatcctttcatccataaaccttttattttgccacaccttgtggttatcattacctcctaacaaatttagccttttatgcgcaaacatgcatgcttcaccaagtgctaacctattggttagaatcctgtgcacaacagtaaacatttaatttattttcatatttgggtgcgtagatgtaatctttattagttacatttgcacacaaccaccttcatgttgacttttgtatttaacatctccacaacttttgatatggtcatccaatgatagaatgtattaattaaatatagaggacttatatagattgtattggcacttattaagtaggaccaaatcataggactaatataggaaactgcacatatggcaagagcagtcgtttcatactactcgacatcccgagttcaattccatgtgacacgctcccttccttctaaataaatgacacgaagctcctccttagtgtcccatattttttttaagaaggcaaaagttttgtctcgtatatattaatagagcaggagaaaaaacaatcaaacaaccaaacaagttatttacagggccctgccgaaaaaaaaacagagcccacaaaaggagaaactacgttggctctcctatcagggttgactcagcgagttttgcgactcccgccttgatccaggtcaacgcctcctctttgattttagtgatgatggtgattggggttggtggccacgtggtggaactgtgtttttttaagctccgctggcagcaactttacaggatgaattgcttattatagggaggatttttattttgttcttaagtagtgctttagttgagaacgtagagtacttggctggtagggtgctgccaggagatgctcaacgacttgggtttgaaccaaagttcctcaccccctctcctatctttcttaaatacattgatactaagttcctcaatatccaacatgttttcagtagtccttagttttagttttattgctatctactggcctgaattaaataatcataattatgatctgtgtctgcagccaggcggctattctggtagagtgcccgagttaggtagatgcttcttccttgtagacctttggaaccacttctacccgttgagcgcctatggtgtcggtactccggttcgtctcccttccggtcaggaaattgagcagtactttgtgccgtatctttcagccattcagttgcacaccatctcagacttcacttcatgcaagtaagtatatatatgtcagtttctttgtgtataattggccatcagatgcatgaagagtttgagagttttacatggttctttttgtctgaactgggcgtggtgacagcgagataatggtcggcaataacttgtttgatgcgaacaactacggctggtgcagtgcggcagataactggaatggtcagtatgcaacaacatcattagcgaggtatgacagcccgaggtcaatgaatggagggccatgttttcagtactttgaatgtgattccccttatgaaaggatgcctctcgcagacaaggtacgcatgcagtagtagctatagcttcaaacttcttctctggaaaggaaattccatcagtttttttttaagtttttaacttgcacttaactttaaagcttactagtagttcatagtatttgcatattccaatgaattgtacagattagttcttccattgcaaactgccatgttatatatcctctttctgacattctttctatctatcatgtattcaggtgtatgagctgtgctataactttccacccctatcatatcttagcagtattgagctctctccatctagttggatgtcagttttctggtaatttttccaaattcaaaataacttcctcatgttttttatttaatcatgtaaattcacaagtacattttagggcaacgttagctttccattaacttgaagcaggattgcagatttatttagcgtctctaatctaattgtgccaaccaaaacagaggtccattatctattaaaaaaaagagagcaaatcagttgccaatcttttatatttacttcaggtatcctataggccatgttcccgcgatgaacaagaaggacctgactacttgcttcttgacttaccatagcctgtcaacattagaaggtaaataaagacagtgacacattaccattaattttttttacttcctctctggaagaatgctatatattcaaatatgaataatattttggctccccgtttgcaaattgcaatgacttgagtttcgtcaaaatcctgctatgcaactgcacatatattggttcatgctcttcgaacaggctttctacacatagtgagatgtagtgcttcagtttttctccagaaatgaaatctttgttttgcatatggagtgtgaaattaatgttctcgatctaattcagaaacattgtgaacattttattgtagatcgtacgccgtttgacagcaaggacccgctgacgcttcccccaattggcctcgcgacgcacaagacggacggagatgtatggacaagcgcgaactccggcgaccaagagctgaccacctccctcgtcggcgcggcggactcgtggctgaagaagcttgacgtccagcatcatgacttcaattacttcctcaacagtaacaggaacctgatccactacaggtccttgaccgaagcaagtaccagtgcagtttga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0528000, RefSeq:Os04g0528000