Os04g0528400

From RiceWiki
Revision as of 11:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0528400| Description = Similar to ABC transporter| Version = NM_001059911.1 GI:115459551 GeneID:4336469| Length = 5683 bp| Definition = Or...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0528400

Description

Similar to ABC transporter

Version

NM_001059911.1 GI:115459551 GeneID:4336469

Length

5683 bp

Definition

Oryza sativa Japonica Group Os04g0528400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26797579..26803261

Sequence Coding Region

26800959..26801080,26801179..26801248,26801336..26801418,26801561..26801738,26802499..26802974
,26803088..26803139

Expression

GEO Profiles:Os04g0528400

Genome Context

<gbrowseImage1> name=NC_008397:26797579..26803261 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26797579..26803261 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagttcaaggccttcttcaccgacgacggcatcgctctcctcgacaagcggttcctgccggcgatggacaaggtgggccgcctgtgccacgtctacctcacgcccacgcacgccatgctcctccacaacctcctcggacccacggggacggggcccgacggcggagggccgcagtgcgtcgcgcagttcgccaaggacctcctcttccgggagtacagcgtgtcgtcgcggaacggcaaccgcgtggccttcgccgtcgacgtcgcgctgctccaccgcgccctccgcagcgcgctcgccgtccacgcccagtcgccggccgccggggacgcctcagccgcgatacaggtgaagctcgtcaacaagctgccggccgggtcccggtctgcctcgccgttcctcactttcgagaccaagggagcccgctctgctgtcgtgcaggacgtgcccatctcgcggcccctttcacgctccgacgtcgagcggctgcaggctgccctcgactccgcccaagagctccctcagactctagttcaggttccagatctgccacagttgcagagtttggtcgatcgtctaaaaaatgtcggcgatcttctgacagtagctgttactcaatatggtgacttacatctacacgttgccacttctcttgttactgttggttcagaattcaggaaacttcgtatccttggtgttcgtgcaaccgcacctgttggtgatcaaaatttgagtgcttccactcgtaccaatatggcaattgagagaggggaggcgctctcagtgcaagtgaatatgaagcacctagctaaaagtctacaatgtcatttggctaagcccgactgtaccttctatggtatttctcctggtggtgcttgcttgactgtgatattccagtatttcattccaggaactagactgacggacaagtccattagcttctactgcaggcttccagtccttgaccctggcagttaa</cdnaseq>

Protein Sequence

<aaseq>MKFKAFFTDDGIALLDKRFLPAMDKVGRLCHVYLTPTHAMLLHN LLGPTGTGPDGGGPQCVAQFAKDLLFREYSVSSRNGNRVAFAVDVALLHRALRSALAV HAQSPAAGDASAAIQVKLVNKLPAGSRSASPFLTFETKGARSAVVQDVPISRPLSRSD VERLQAALDSAQELPQTLVQVPDLPQLQSLVDRLKNVGDLLTVAVTQYGDLHLHVATS LVTVGSEFRKLRILGVRATAPVGDQNLSASTRTNMAIERGEALSVQVNMKHLAKSLQC HLAKPDCTFYGISPGGACLTVIFQYFIPGTRLTDKSISFYCRLPVLDPGS</aaseq>

Gene Sequence

<dnaseqindica>2182..2303#2014..2083#1844..1926#1524..1701#288..763#123..174#actcgcgaagtcccctcgaactcccaggcgcgcaaaaagtcccctggggaacttccagcggcgcacccaccgccagcagcagcagcttcgccgcccgccgacgccgtagcggagggcaagccatgaagttcaaggccttcttcaccgacgacggcatcgctctcctcgacaagcgtaaggccctcggggggcacgacttttcctccgccgatcccaatctctctctctctaccccgcaattcgtcgagcacctcacgcgcgtcgcgccgtcttgtctgcccccgcagggttcctgccggcgatggacaaggtgggccgcctgtgccacgtctacctcacgcccacgcacgccatgctcctccacaacctcctcggacccacggggacggggcccgacggcggagggccgcagtgcgtcgcgcagttcgccaaggacctcctcttccgggagtacagcgtgtcgtcgcggaacggcaaccgcgtggccttcgccgtcgacgtcgcgctgctccaccgcgccctccgcagcgcgctcgccgtccacgcccagtcgccggccgccggggacgcctcagccgcgatacaggtgaagctcgtcaacaagctgccggccgggtcccggtctgcctcgccgttcctcactttcgagaccaagggagcccgctctgctgtcgtgcaggacgtgcccatctcgcggcccctttcacgctccgacgtcgagcggctgcaggctgccctcgactccgcccaagagctccctcaggtgcgatgcattttactgaaatgctcgtgatatttcattagattatagatttcctcggagtcggatttggacgcccaaatgtggaactagttaatcaaagttgaataggttttcactgaacaatctctgctgggattattttggctttagatggaggcatcaaatgtacatcccttagtgtaggcttttctcattcgaaagcttgaactatggaattagtgatgagttggattcaacttgggctgccttatcaaattgaaacttgaaacctcacgtgacatactcatagttcactatagcaaaagcactagtccagtttatttcagtcataagaaactaactgcattatttgtttgtaccttgagaaaatttataaatagccaacaagactcaggatcaccgatcacaggcggtacacactaagttagtattacagaagcaaaatgtagaatagcaagtatactagtctggaactgccattcatgttttattttcgtcctgaaatcttagtcatgcttctttataataccatgtcaaggagactaaattagacaccccaactaagttttcctggggaattgtgtattcactcagggaggtttatgttgatttaatataaacgtcaagaatcacagacaactaaaagtatcttctatttcgatgattctaatctctaaatttattcttctttgcaaaaattgtagccctaaatcctaatggatgttgtcatgttgatacttggtttctgttctttctgtagactctagttcaggttccagatctgccacagttgcagagtttggtcgatcgtctaaaaaatgtcggcgatcttctgacagtagctgttactcaatatggtgacttacatctacacgttgccacttctcttgttactgttggttcagaattcaggaaacttcgtatccttggtgttcgtggtaagctgctctacattccaaagcaagtgtcaataatgtctttttagcagtgctgtcattatgttgaaattacctttttgttttaacgtgaatgaaattacttatcttatccatatttttatatgaattttctgcatttcagcaaccgcacctgttggtgatcaaaatttgagtgcttccactcgtaccaatatggcaattgagagaggggaggcgctctcagtggtattactcctaagagcttcacgttttttttttttaccatttttcatgcagctgttcacaagtttctgtctttctgtgtttttacagcaagtgaatatgaagcacctagctaaaagtctacaatgtcatttggctaagcccgactgtaccttctatggtgtgctttccagctatttctgtaatcttactgacaagttccaaatttgtgttggagagtcactttttgcttaaatactgtcctttttaatggcacaggtatttctcctggtggtgcttgcttgactgtgatattccagtatttcattccaggaactagactgacggacaagtccattagcttctactgcaggcttccagtccttgaccctggcagttaaacatattacagcgtggtaattactgacttgcttctgatatcatctaaggatatgcaatactattagcttagctactgtacctttctgttcaatatcttactatcttatgtgttatgacttgcttgtggactcaatatatgttggctcagcaataattcgctattttggaacatagcatttttattatcgatacctgcaaaactgaactgcttccactcattgttgttgtgatatcacttcgttccaagttgagccagtctcctatgcatgcgatctatttcctaactactatttacaatcccactgcttcaaacatccagatctcagtatcatagaaaaataaaaggaaaccagatttacggtaaatgataattacggaattatgttttttattaaccgagtacaaaattttcagtacttcccttttgagtgtatgaagatagtaatcatttttggagcaaatgaaacatttttttatcaatgattgcatggggcaaatgtatactcttgagccccatgtccttggtctggcataagagggaccaaaatcactggaatcattaatcttcctgtacacgcgtcctgtactagccacctcgacgctcttacatgtatggaacgtataatcctacgaacagtttttttatgcagtactaacagtaatttaacaaaaaaaagtgttggtttttacaaaatacaaataaaacttgaaatattccatgtttccatgccaaatgtttgtttgaaacaagtttatctatctaaacgttacaactttggtactgatctttcggcaagcgagcagaatcaatgtgatggtgtagtgcgtattttgaacggtgctttcgcctttagggccccaaccatttctttcattgttaatattgcggtactgccattctagaggaaggattttttttactgaatgtagaactgtaaattatctgtaaaagaagagacaggtaaattctgaaccaccagctatgtgtcaactctgcatctctgatgccatttttcacacattacatgtctgtatatacctgtattccgatcagcttgagcttcagtttcaaaacgtataaataccagtttctctgatcttagatacatattccaccaagaaccggcaagaaatgggcctatatctgctaacagtttatattctagctttcgttaggaccaagctctggatccacaacgtagcctctgagggagggtgtcttgccaagaggttccttcttttgaagccttttccttgcaatgtacccccgaatccatggcagtgcatcctcatttaccttgatcatgaggaagaacagaatgcggtagatgaagatcatgctgaaaattactgagagatcaatccactttgaccggtgcacgttgatctggaatatgtacttcagaatgaagtctccagggatcttcggttggtctgggtactggttgtcaaatacgagaccatccatgtcattctggcattgcccctgtcaggttgataaaagtttggtgtcaaattttcttcaagataaaaatttagtgtgtttcccctgtcaaagagtgggatttaatttacctgcagcgcccagtaatggaagctgatgtactgcatggggtatctccaaacaggcttcggaatgtcgtaaggaagtctaaagtatccagagacaagcataaatattccctaggaaaaaaaaagtaagacgagttatgtttactgagttatgaagttctgaaattttaattgaaagaaaaagcgtttcctttgtaaggcagcaatgtaatgcggccactaaaggataggatcagcagttagaagaacaaaacataggaataagatcttgaacgacctcaagctgtctttaaactgggatgggagtagtgtacagtaatgctgggtagcgtacggtaaagttgtgctgtccagcatttatttctttgtcaagcttgctggtttatttgactcatatcagattatattagaacctttcaaagttttgtaagctctcattcatgaacatatcttaaatgccacatgatcctctgggacaatgccatggaaaaaaaaacagacttaagaactgtaccagacgggaacaaccgagttcggtgtttcgatccaatctttctatagcactatatttaatacatttggtcctaattaatatgattgttaacatgatagtactttaaagatagacctaaatgaacatccattacttcaacaataaaccaagagatataggttaagaaagcttatgaaagaagcataaagatgtacctgaatcccagctcctataatgatccccatgaggaaattagggatgacacttgcaatggccatcatcaagctctcaaccacagtgacgctggcgtagaggttgagaacgaagaagatgtagtgggagaaacctgggtgaaggcgcaccatgaagtagcatatggtccctgacaagaagcatatcaggaccaagaatggcagcgccgagattgtgttgctgatgacaaaagccgcgacaccgtaatgcccattcagccgctccctttggaaaacctgtcaatgaacaagggaaaactgagcaaatttggcatggtaattctagcatccagatgaaaccgtttgcttggaattcaccttcatttcttcaacaaatgaagggaaccctccaattgacatgaaagtgacgaatccgaagacgaatgcggtacaggcagccctagcctgttcagagtgtaaaccaaaacacatcagaaccagccaattaatggattcatgacagattactcatctgactatgttttttttaatataaacttctattacagcattccagtcataagaatcgcttatcagttccttcatttcttaccaggatggatgtgtacttggtgccgacgtcatagtagatggtgccaatgcagacggtcacgaggagatagatgaggagcctcagccagtaatacccgaagtcccttgacatgttgatgaaggagcgcttggtcagtgtgcctgcctgcatcaagaagctagcctggcttcctcctgaatccagcacagttcctttctgcaacgaataacatgggtgtgttagtgttcatcctgttattgcctgtcctggatgcagtcttaactatacgtgggggcgcaagaaaaaaaaaacagagaggaaaaagagtgatatcaatacgcgctgctgtattagggtcgccaagaacacgtaccagtcgtgagatgtcattaactctctcccttgcagcgtagtagtactgggacctgctgtaggatgcaaccaactttctgatggcttcagatgtggtcatcctgtccagaggatcgtccgacctctcgatcttcaatgagaatgcccaaaaattagatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0528400, RefSeq:Os04g0528400