Os04g0529400

From RiceWiki
Revision as of 11:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0529400| Description = The start codon is not identified.| Version = NM_001187094.1 GI:297723318 GeneID:9269146| Length = 4659 bp| Definit...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0529400

Description

The start codon is not identified.

Version

NM_001187094.1 GI:297723318 GeneID:9269146

Length

4659 bp

Definition

Oryza sativa Japonica Group Os04g0529400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26874022..26878680

Sequence Coding Region

26875610..26875616,26877544..26877701,26877786..26877837,26877943..26878025,26878110..26878262

Expression

GEO Profiles:Os04g0529400

Genome Context

<gbrowseImage1> name=NC_008397:26874022..26878680 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26874022..26878680 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atctcagtgacatgcatccaattcaaccctgttgatgatagatacttcattagtggttctctggatgaaaaggttcgcatatggagcattccgggacgtgaaattgttgattggaatgatctgcatgaaatggtcactgctgcttgctatacacctgatggacagagagcattagtcggttcccacaagggcagctgtcatatttatgatacatctgataataagcttctccaaaagaaacagattgacttgcaaaataagaaaaggaagtccaatcagaagaaaatcacagggtttcagtttctcccaggaagttcttcaaaggtgctcatcacatctgcagattcacgaatacgagttgttgatggttttgaactagttcataaattcaaaggtattaagttttgtgccttggaacttattcatatcagattgtttttgttcaaggtttag</cdnaseq>

Protein Sequence

<aaseq>ISVTCIQFNPVDDRYFISGSLDEKVRIWSIPGREIVDWNDLHEM VTAACYTPDGQRALVGSHKGSCHIYDTSDNKLLQKKQIDLQNKKRKSNQKKITGFQFL PGSSSKVLITSADSRIRVVDGFELVHKFKGIKFCALELIHIRLFLFKV</aaseq>

Gene Sequence

<dnaseqindica>1589..1595#3523..3680#3765..3816#3922..4004#4089..4241#agtcgcgcagacaggcagcagctgacgcgcgcgcgggggcgagggcaggaacccgtcgcgattgggcggacgacgaaccggtcgcgcgcgggcgcgttcgggaatcgtggtggatctgacgccaccaccgccgccgccgccgccgctcggttgctcctctcctcgccgcgccgtcgcgtgcgtcgccgtcgcctccttgcccctagcgggcggccgggcaattccccgcgcgcctgctcgatctgcctcggtggtcaatgcgggcgaggagatgagcggcgccgcaggcaggaggcaggcaggcaggcggggtgatcgcttctatgaggcgcgggaccggtgctctcctcctcctcctcctccccacctcggcctcggacgacgacgaccacccgcggcgaggtcgggatgcggcggctgctgctgctgcggcggcggcggcggcgctcgacgtgtggacgtcggagccagcgcccgtgcaggaacgacgccggaggcttctccagatgatggggctctccggtgacccctctctggcgcgcctcgagatgggtcgatcggcctcctacgacgggcccatccggccggagacggtgtcgcccatctcccgatccagatcggatggcagcgtgccggcctccgccaccaagcccccgctcgcggcccggtcgcgccaaacatcgtccgactcctccgaggccacgccagggggagatgacgcggaccccaggtgcctaatccgaaacctcgacgacggcagcgagttcgtggtgaaggaggagtccgcgctccgcgaggtgggcacggggaggcagctcaccatggaggagttcgacctctgcgtcggtcgctcccccatcgtccaggagctcatgcgccgccagaacgtggcaagctccggttcgagcaacggagcgtccgctctcatccagaggtccagctctgattcaagcaacggcgcgacgcgccacaggcggcgcggcagctggctccggagcatccgcaacgtcgctggctccatggtggtcggctcccgcgaccgccgaagcagcgacgagaaggacacctcctcggaaaagggagggcgtcggtccagctcagccacagacgacagccaggaaagtgccagcgccgtgcgccgtggcccggagcgtgtcaaggtacggcagtacgggaagacatgcaaggagctcagtgggctgttcatgaaccaggatatacaggcgcacaacgggtccatctggagcataaagtttagtcacgacgggcggtacctcgcgagtgctggggaggattgcgtgatccatgtctgggaggtgtcggagcttgagaggaaacgggagggaaatggggtgtgcaatcaacttgttgccgtcgtgtgcaatggttcgccggagccgatattggcattggcaagtgttgatggaagctgttgggagaagaagcatcgggctagaatcttggaaactcggaagtctgcgagctctgaccggttgatgtttccagagcatgtgttcgcactatcagaaaaaccggtcaaaacttttgaggggcattcggaggatgtgcttgatctctgctggtctaaatctcaggtaatgttacaaggtttctgttcattcaaaattcctccactgttgatgctccttgaatactcctataaaggaaaaagggtgaaggttgaacataatctcacaacctaaattccactaaaatttagtagtgacagagtgtgcttcttaactctcagttaatttcaactatagtcttaacatctatggtgaaacctcgaagtgcattgttttccatcaaaccatctttgtcataactgttagtccaactgtgtcagaacaagacactggcatcgagtagtcaagggctggtacagttcaatccttatcacactttggtgtagttcttctgaaacatggagcatattgatgcaaattggtgtcctttagctctgaactaatccttctttgttcattggaaggaaggttagaagtgcataagcagcaatctggcgaattgcctgcctatcgattgcatcatatagaagaggcactgcccaaattctgccatagactagttacttaccatgtccaagctcatcaattctattatatctgttacatgatgtgacatgaatactcctgtttttcatttagtgactaaattttagaaatgattcactaataagatacacaggaatgctatgatctacctttcagcatgctgtaatccctaaaatggcgataatgtaacaattagaaaaataagtttgttggattatgtcctatgaatcaatgtaaaatatgttgttctgcaaaatccatttagccttaatataatctcccatactagtactagtagataatataaatatatttgaggagtttcagccttcttttggtactacgttacaggttatttcatttattcatgtttaagatggatataggtttcaataaaggtcccgatgcatgactctggtgactcctgtatacatagatgaagttaacttggtaccatgttatatcattatttgtccaaagtaggactgtcaggaaatccttctagcatgtttcatattcagcatggcatgctgcataacatggatgacatatgttgcttgaccaattgactttgaatttcatgcgcatcagtaacttatggagttatggtctagaaaccaggactcgcatcatcaactatgtattgaaatttcagatgtctattgagagaatgttagttcatcctactagcagttcattgccctttgaaagtccaaatgcatgatcagatgctcctaatttgttgggcccttgttgtaagaagatgttagtatctaattggctttacattgtgtttggctggagaagataggaacttctcccaatgcatgcaaaacggagcggctcattagcacatgattaattaagtattagcttaaaaatgaaaaatggattaatatgatatttaaattaactttttttttttgcaaaaaaccacaccatttagtagtccgggaagcatgctcatggaaaacgagaaagtagaagatgggaagagggagtattgaacacacccagagggtagttaccttttgcagctagttatacatatatggtttctatataccttatgtggctagttacatatccagacttcacatttgtcaacaacagttacatgcttccagcaatgcatccccaaattatgattgctacaattccatgaatcttgtagtggtattcttatggttttgtagctattccagattttaatttctttctttttcaaacatcgtgcagtacttactttcatcttcaatggataaaacagtgaagttatggcatatgtcaagaacttcatgtttgaaaacattttcacatagtgactatggtaagatctcgagttgacattagcagttttgcgtgttctctctctcccccaagcacatatgacgtttctcactctgcgaacatactctaaattttcctttgctgctttgcgtttcagtgacatgcatccaattcaaccctgttgatgatagatacttcattagtggttctctggatgaaaaggttcgcatatggagcattccgggacgtgaaattgttgattggaatgatctgcatgaaatggtcactgctgcttgctatacacctgatggacaggtttctacactatatactgatgtatgtgaccgaaaaggtctttttgtatgttagctctaataccttgtctcatattttctgaagagagcattagtcggttcccacaagggcagctgtcatatttatgatacatctggtatatctcaccctctcatgatcctcatatcttatgagtgtatttctgtatgtttttggcttacttttccttcaggaataacctgtctctcgatcttatggccagataataagcttctccaaaagaaacagattgacttgcaaaataagaaaaggaagtccaatcagaagaaaatcacagggtttcaggtgcttctaacacacttttgaatatgaagcaaactatgtgcagatcacagatcttctcttactgaattgtagttccttgaatagtttctcccaggaagttcttcaaaggtgctcatcacatctgcagattcacgaatacgagttgttgatggttttgaactagttcataaattcaaaggtattaagttttgtgccttggaacttattcatatcagattgtttttgttcaaggtttagtatcctttttctcagatatacaaatactcctgaatgttacttacctgcttcttttcggttgtactaagtacagtcccagtcaaacttcttattcatccataaaccacctttgttacttgttacttttaccactcctttttttgttgcagtgttgcactggaatccaggtgtatagagttatgctaggaagtcataataggtctgcagtaaccaaatcatgctgtgatcatcagatcacaaatactgcaattccctgctcattgattaaaattttgaacgtgactagttaaaactagtttctcctgtcgttttctttcaacaaagtgccaaaactgtcagaatccactttgttgaggcaatagttgtaatgttcacttaacatgttataaaatagttatatccatctttcgatgagtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0529400, RefSeq:Os04g0529400