Os04g0530000

From RiceWiki
Revision as of 11:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0530000| Description = Conserved hypothetical protein| Version = NM_001059920.1 GI:115459569 GeneID:4336478| Length = 3978 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0530000

Description

Conserved hypothetical protein

Version

NM_001059920.1 GI:115459569 GeneID:4336478

Length

3978 bp

Definition

Oryza sativa Japonica Group Os04g0530000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26909903..26913880

Sequence Coding Region

26910105..26910301,26910707..26910758,26912248..26912298,26913157..26913291

Expression

GEO Profiles:Os04g0530000

Genome Context

<gbrowseImage1> name=NC_008397:26909903..26913880 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26909903..26913880 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcagagactcacgagaaagataagcaatttgagaaagaaggagaagaaggggaagaggaagagtatgtcttgcttgagttggatgattgtctttattccgacgtgcaaccaaatgcttcatatgtgctctctggtctggatacattgactcctaccttgatactaggtgatggcctgaaaatgattggagaataccaagagactattggcacatgctatttgttctcagaaacaaatgctccaccaaaacccattcacggtgagatggcacctcctgaagaaaacaaggacaagcaagccagctgtagcaaggaagtgccatcaaaggaggtgaagcatctcgcaagcgttcagaagatcctcaaatttcgctctatcaatgcggatcatgagcagcgtagagcctacagggataatgagagagaaatttga</cdnaseq>

Protein Sequence

<aaseq>MSETHEKDKQFEKEGEEGEEEEYVLLELDDCLYSDVQPNASYVL SGLDTLTPTLILGDGLKMIGEYQETIGTCYLFSETNAPPKPIHGEMAPPEENKDKQAS CSKEVPSKEVKHLASVQKILKFRSINADHEQRRAYRDNEREI</aaseq>

Gene Sequence

<dnaseqindica>3580..3776#3123..3174#1583..1633#590..724#gcctcggctccgccgccttgctccgtgctccagtgctccgctcctcctcccttcgcccctacggctctcggcggtgatcctcacggcatcggcgcctttccatcgcctgcggctggccccgcggagcgcgggtagggcgctcggcagctcgctcgacgccgttgcgccgaccggtggtgccggctcgtcctcggcgccggcggcttgggctcccgcgcaccctccttcgtcggcacaacggcagaaaacgaagctacagaggtgaaatgaatccccagtccgctgttcttactattcgatttaccagctgttgattttttaatctatattgctgaacatgaacctgaatgtactgtctcttgtaaaatcagttctctgtttaccttgcgtttagcaggagtggacttgatacaaagacacacttattagtagtgaaaatgctatattgtgttttcacttatttaaataagttttgtgataaatcttactgtactaattggtctcccacccgtaaaccttgcagatacgttggttggtatcttggtgaattcagggtttattgctgattaggagaaattccttgttgaatatgtcagagactcacgagaaagataagcaatttgagaaagaaggagaagaaggggaagaggaagagtatgtcttgcttgagttggatgattgtctttattccgacgtgcaaccaaatgcttcatatgtgctctctgtaagttcatccttctccaaatcagtggcataatggaacagatggcatgttttgagtttacaatttttttttctctgaatgttagattttatagatgttagggcctggggtaatgtaatatctagagatggctctaaaatcaaacatcaaggaagaggttgcttatttcgcaaaagaaaaacaaagagcctggttgatatttgctgaagagaggaatgtgtatgggcatatagctggagtagtgagcttgatgctgattacctaatactccatccgtcccaaaatataagaacatagtatgggacatttcctagtactacgaatctggacaggttgatgttccatctggtactaggtttttatattttgggacggagggagtagaactcttgccattagtttgagaaagatttaaactaaaattcctaggaactaaatttcatggaagcgcaaaaggataaagattcataagtttcatttattttcagaaataggaactgaacttagttcagttggttgacttgaacttgggtgccttgtctattaaattgatactaagtttctccttaatatccatcacttgtttcatgtgtttttagcaaccttcgttggcatatatgttcagaattcttcaaagtcctttctgctggcaattggtattagtttcagctacaaactacatagagcttctagtgtgtgttatttagccgttcgattcccagcaatttagagactttgcacttttgtatcatgatttatggacgtgcaaacaccaatgttttcacatgctcatatctattttaaaatgtttgttcagttcatttatgtatacttaacaagtttggtcatgttttccagggtctggatacattgactcctaccttgatactaggtgatggcctgaaaatggtgagtactttattagtttagtttctcttttatcgcttgacttcttgtttgatcatgcccctgagatgtggagtatggacttgttgatagtgatcgagatcctttgtgccctagattcattacagccatacattgcctgtaagttcttgcgagtatgcactaatgtgtcatggttcaagctttacctgagattatactagaaaatcagcgcgcctgttggcgtgcttactatatgaccatcatgtgtttattttatatgcccattagtcaatggcacatacatatgttttagtgaaataagttgatttttttgaattttctacaggagcttcaaagaacctcttaatgtgttttagctttcaatgtaatctgtatcttataatattgtagtgaagtacttgaaaacagaacataatatttccttttttctaatgctacttttcctcatctatttattttttattagtgaccaaattaatgaacctgtaaaggagtaagatggaaaatacataaatatatatttagtgcataatcagatcactgagctagttgggtattgaaacaaccgatgaagaataagagagcagacttctatttcattctagttcagatttgagaaagttctagacttccctttcttaacctcttccctctgtttttggtgcagcacaaatgagtttttcatttctttttttttctattagtaattgcttgatttatctcagtttttatagtgccatgtggtccaatcacaatctggtaaaactgccggcttgagaataataagattcaaaaaatatactccttccatactcataaaggaagtcgtttaggacaatgtttaagtcaaaccttgggaatataaatcatgaataactctcaagattatatgaggtttgaaaatataaaaattatatgaatagatttgtcttgaaaaatactttcataaaagtatacatatatcacttttcaataaatatttttatagaaaaaagaagtcaaagttgtgttttggagaccgtgtctctgtcctaaacgacttcctttacgagtatggagagagtatatttcaatacctcctacacgatcaaaagttagaacatgtttaactcttgttattggaaactgtctatgaagtaatattcgttaggaaaacaggtaatactgtactcgtgtatcttagagtcctgacaggacaaggtggacatatgacacatttgaataccatacgttatttgttgtagcttcagtgacaacgtacaacaatcaatgcattagactaaaaatatcaggttgacgctgattgctttgcatctgctcaggagactcgattgggtttttttttcctctgctaactttgacttctaaaataattggtttgaagattagcggtctgtactttgggtttcaaattataaacctgtttgctcattgaaacactaaacctccttgctgagctagctgtccgttaatgattgtttaatgacagattggagaataccaagagactattggcacatgctatttgttctcagaaacaagtaagttcttttattcaaaccattacccccttttcttcttttttgtaaattaaccggccttagatgccattaactagtatattgatttgatacctgtgaagatgctgttgttgacatgatatttcctgaagattttagatggtagctttataatttatacacggtcctacttgcacctcgtgttctaaacccccattagtgaatcctctattaggatatggttgaatcaaaagaactttatatatatatatatatatgttttgaccttgtcatcaggcagtttaatcaatgtttattaggacctaggagccccttgttgcagatagtgtaaagaaaacttctctttcatctaatgctgtttttacagctaattcgttcaatgttctaatccctttttattgtcagatgctccaccaaaacccattcacggtgagatggcacctcctgaagaaaacaaggacaagcaagccagctgtagcaaggaagtgccatcaaaggaggtgaagcatctcgcaagcgttcagaagatcctcaaatttcgctctatcaatgcggatcatgagcagcgtagagcctacagggataatgagagagaaatttgaaacagaacttgtagcgttttttttttctcatcaccaacttgtacagtatttatgctcatctcactgtggtcctctaatattattctcatcttactgtgacgctgtctagcttggtttagcttggaaagttgcaatatatgcgaaactcttttgcctcactgtaaacatctgagaggcttaaaaaaatcgagcatcatggtgg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0530000, RefSeq:Os04g0530000