Os04g0530600

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Revision as of 11:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0530600| Description = Similar to Thioredoxin 1 (TRX-1) (Thioredoxin M)| Version = NM_001059926.1 GI:115459581 GeneID:4336484| Length = 248...")
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Gene Name

Os04g0530600

Description

Similar to Thioredoxin 1 (TRX-1) (Thioredoxin M)

Version

NM_001059926.1 GI:115459581 GeneID:4336484

Length

2489 bp

Definition

Oryza sativa Japonica Group Os04g0530600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26939029..26941517

Sequence Coding Region

26939342..26939661,26941196..26941418

Expression

GEO Profiles:Os04g0530600

Genome Context

<gbrowseImage1> name=NC_008397:26939029..26941517 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26939029..26941517 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctccgccctcgccgcctccaccgccgtctgctcctctcccctcgcatccgcctccgcctccgcttcgtccgcgcgccgcctgcgcgcggtcccgccctcccgcggcatccgctaccaggccctccgcgcggactccggtttcgccgggaaccgccggggtggcggccgtggagcgtcggtagtgtgcgcggtccagggccaggacacatccatccaagttccagaagtgacgaagtcaacatggcaatcacttgttatggagagcgagcttcctgtccttgttggatactgggctacatggtgtgggccttgcaaaatgattgatcccgttgttggcaagctctccaaggagtatgaagggaaactgaaatgctacaagctcaatactgacgagaatccagatatagcaagtcagtatggcgtccggagcatcccaaccatgatgatattcaagaacggagagaagaaagatgcagtgattggagctgtgcctgagagtacactgatcgcatccattgagaaatttgtcgagaggtaa</cdnaseq>

Protein Sequence

<aaseq>MASALAASTAVCSSPLASASASASSARRLRAVPPSRGIRYQALR ADSGFAGNRRGGGRGASVVCAVQGQDTSIQVPEVTKSTWQSLVMESELPVLVGYWATW CGPCKMIDPVVGKLSKEYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKDA VIGAVPESTLIASIEKFVER</aaseq>

Gene Sequence

<dnaseqindica>1857..2176#100..322#ccattccccgcaagtctccctctcgcaccacaacaaacgcgcctcctccatctcgaactctccagtctccaccacccccgtccccgtctctcgatcgccatggcctccgccctcgccgcctccaccgccgtctgctcctctcccctcgcatccgcctccgcctccgcttcgtccgcgcgccgcctgcgcgcggtcccgccctcccgcggcatccgctaccaggccctccgcgcggactccggtttcgccgggaaccgccggggtggcggccgtggagcgtcggtagtgtgcgcggtccagggccaggacacatccatccaaggtatgcacgccggtcttctgctcgtgctgaatctgacgtgtatgtgttgatgttgatctgttacgagattaggtggcgaactgcctcatccaatcggtgcatagatatggatctcagtttctcacatgagtaacattttactagatactggtgattaaattcttttgttttctgtcagtagtttagatgctgaatttgtgttgggactcggtcatttaggcgtagttcctctatggcagcatgtcggtaaggggttgaaggattaaattgttagatgcaatctcattttggacgcgatactatgaattttggctactatgtgtgaggttgagcataacgtatatgcctatgcctctgggcttgcttgtgtgcgcatgccttcttttcatgcatgaatgcatcgtgtggtgcctgcgtgaggtacatgcaggaagtgtgcttcaagtgtagagttgcagcggcatttccaatgaagctcttgtgtatgtcagtatgtgtctgtactctgtagtacctgcattatgcagcaacaagccatcggtgcacactagctcgctgtacgattaacatatcctttttgtgcacttggatataagcatgagaaagactggggtgatacgagaacaatcagtgggatttaaaaggcaccagaacagtgttaagaatcaggaaaaatctaaaaatctgagaaaaggactgaatcggtgaatcctataaatttcctccttgatcaagcgtgttaatatatttccttttatgcctctcattggtccacttgtcatgcggaagataatgatttcttaaattcagttgcacataaggaagaaaggtgtataagcatgaatttttaatagttgtgctccatctaagtttcacatggtacagttacacaatgtatcactatattattcaaaatataagttctcggactcggtggaatttaaccatgttattttcccagaaatcaaccaaatttggttggttttggtcttttgaattgcatatcattggcatacaaaaaaaattcagtaatgttgtagtaggctagtgatgttgcttctacaaactgtagtttctaccccttttttttctttattttattgcctttatcattctttagttcacggcacatcaatgaaacctttggattaactaattgattggtgtgtacaattgcacggtgtagactcatacagtataatgcatagttgcatagaatgtaataatagaagataaagaaaaatgtgaaaattgtactttacgaagtgaaaagtgggaacattatttgtgatatttgacttgtataatttagcacagtttattgtagatgtctccttgaatgtattaaacaacgtagtgctatatataccattacggctttcttttacctaccctttcccacagtgagcttttatatatatgatggatttatgctattttacaatctacatgatgttgattatctggtattgtatcgatggttgcatcatttgatgtgttctgaaccattcattatgatatcacccatttgtagttccagaagtgacgaagtcaacatggcaatcacttgttatggagagcgagcttcctgtccttgttggatactgggctacatggtgtgggccttgcaaaatgattgatcccgttgttggcaagctctccaaggagtatgaagggaaactgaaatgctacaagctcaatactgacgagaatccagatatagcaagtcagtatggcgtccggagcatcccaaccatgatgatattcaagaacggagagaagaaagatgcagtgattggagctgtgcctgagagtacactgatcgcatccattgagaaatttgtcgagaggtaaaatgcaaatgccaaaactgaaccctttgaacagttagcattacacgtccaactttcagaacttcagatcattcaagagtcgaagccatgctcaatgtttatatgcctacgtgtatagatagtattgggaatcgctttcggtagcatccaataaatgtaattcgaggatgcaggttgaatgatgaaatcatgaaagtcgcaaggaagcctggtttcatgtgtccattcttttggctgtagatatgtatggtattgactgttaagatacatattacccttttacactatattattgcttatgatatgttccttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0530600, RefSeq:Os04g0530600