Os10g0120300

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Revision as of 08:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0120300| Description = Leucine-rich repeat, plant specific containing protein| Version = NM_001070599.1 GI:115480941 GeneID:4348001| Length...")
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Gene Name

Os10g0120300

Description

Leucine-rich repeat, plant specific containing protein

Version

NM_001070599.1 GI:115480941 GeneID:4348001

Length

2499 bp

Definition

Oryza sativa Japonica Group Os10g0120300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:1287456..1289954

Sequence Coding Region

1287702..1289924

Expression

GEO Profiles:Os10g0120300

Genome Context

<gbrowseImage1> name=NC_008403:1287456..1289954 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:1287456..1289954 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttggccagataagtccatctttgctgtctctcaactacttgcagtacctcgacctcagctcaaacttgctggcagggcctaacggcagtgtcccagagttcctaggttcaatgaacagcttgatacatcttgacctctcctacatccccttctccggtacactgccacccctgcttagcaaccttaccaacttggaatatctcgacctctccttcacatcattttctggtacacttcctcctcagctgggcaacctttcaaatttacggtatcttgatgttagtgagatgcagaatgtagtgtattcgactgacctctcatggttaagtcgtctgcatttgttagagtatattgacatgagcaatactattctcagcaaaataacgaatttgcctgccgtgctcaacaagatcccaactctaaagcatgtcctccttttgaattgttcaattccaagtgcaaaccaatccatcacacacctaaaccttacccagcttgaggagcttgatctctctctcaactactttggccatccaatttcatcatgctggttttggaaagtaacaagcatcaagtcgctccgcctagatgaaacctatctccatggtcccttccctgacgagctaggcgaaatggtgtcgctccaacacctagatttttgtttcaatggaaatgcagccacaatgactgtggacttgaacaacttatgtgacctggaaagcatataccttgacaagagtctctcatccgggaacataacagatttgatggataagttacagtgttccagcaaattgtatagcttgagttctataagcaataatatgataggaatgcttccaagtagtatagagcacttcaccagcttaaatcacattgatcttactaacaacagtgtcagtggagtcatgccacgaggatttcagaacatggctaatttggagtacctacatctcagttccaatcgactcagtggccagatgcccttgttaccgacaagcctcaagatattgcatgcccaaatgaacttcttgtcagggcatctcccgttggaatttagagccccaaatcttgaaaacctaattatatcctccaattacattactggccaagttcctggatctatttgtgagtcagaaaacatgaaacacttggatttgtcaaacaatttatttgagggagaagtacctcactgtcgtcgtatgcgaaacttacgtttcctgctcttaagtaacaacagcttctctggaaagtttccccaatggatccaaagcttctcttcactggttttcctagatctttcatggaacatgttctatggttcgttaccaaggtggattggagacttggtgaccttgcgtattctgcacctgggtcataacatgttcaatggagatattccagtcaacatcacacatcttacacaacttcaatacctgaatttagcagacaataatatatcaggtttaattcctctatctttgtcacattttaatgaaatgactctaaaagctgtgggtgattcaatctcgaccctggcatttgatgagtcatttgatacattttccctcggaatgaagcatcaaatactcaagtatggatcacatggggtcgttgatatggttggaatcgacttatcgctcaatcgcataaccggtggaattccagaggaaataacatctctcgatagattgtctaatttaaatttatcatggaatcgcttgagtgggaaaattccggagaacattgggtctatgaaatcaatagaatcactcgacctctcaaggaactacctttgtggtgaagtcccatcaagcttgacagatcttacatatttaagctacctggacctatcgtacaacaatcttactggaaaagttccatccggacgccaacttgacaccttgtacttagagaatccatccatgtacaatggaaacattggtctttgtggccctcctcttcaaaggaattgttcaagcaatggttatgcacaagggcatggtgatcacaaaggacaagagaaggattccaattcaatgttcttttactatggtcttgcatcaggttttgttgttggttattgggttgtgttttgtgctctgctattccacaagtcatggagagtcacttatttctgccttgtggacaaggtatatgacaagttatatgtgtatgtggtcattacttggaccagatggatgaacactacaaattaa</cdnaseq>

Protein Sequence

<aaseq>MVGQISPSLLSLNYLQYLDLSSNLLAGPNGSVPEFLGSMNSLIH LDLSYIPFSGTLPPLLSNLTNLEYLDLSFTSFSGTLPPQLGNLSNLRYLDVSEMQNVV YSTDLSWLSRLHLLEYIDMSNTILSKITNLPAVLNKIPTLKHVLLLNCSIPSANQSIT HLNLTQLEELDLSLNYFGHPISSCWFWKVTSIKSLRLDETYLHGPFPDELGEMVSLQH LDFCFNGNAATMTVDLNNLCDLESIYLDKSLSSGNITDLMDKLQCSSKLYSLSSISNN MIGMLPSSIEHFTSLNHIDLTNNSVSGVMPRGFQNMANLEYLHLSSNRLSGQMPLLPT SLKILHAQMNFLSGHLPLEFRAPNLENLIISSNYITGQVPGSICESENMKHLDLSNNL FEGEVPHCRRMRNLRFLLLSNNSFSGKFPQWIQSFSSLVFLDLSWNMFYGSLPRWIGD LVTLRILHLGHNMFNGDIPVNITHLTQLQYLNLADNNISGLIPLSLSHFNEMTLKAVG DSISTLAFDESFDTFSLGMKHQILKYGSHGVVDMVGIDLSLNRITGGIPEEITSLDRL SNLNLSWNRLSGKIPENIGSMKSIESLDLSRNYLCGEVPSSLTDLTYLSYLDLSYNNL TGKVPSGRQLDTLYLENPSMYNGNIGLCGPPLQRNCSSNGYAQGHGDHKGQEKDSNSM FFYYGLASGFVVGYWVVFCALLFHKSWRVTYFCLVDKVYDKLYVYVVITWTRWMNTTN </aaseq>

Gene Sequence

<dnaseqindica>247..2469#atcggcgccagctttagcttcttcctcatcacgcatgctcagcaacaagctactcgttgcagaccacaagagagagacgccctcctgtccttcaagcaaggcatcaccaacgacagtgtgggcctcctctcctcatggcggagaggccatggcgattgctgctcatgggcaggcatcacctgtagcagcaagactggccatgtcgtcaagctcgatgtcaacagcttccttactgatgattcacctatggttggccagataagtccatctttgctgtctctcaactacttgcagtacctcgacctcagctcaaacttgctggcagggcctaacggcagtgtcccagagttcctaggttcaatgaacagcttgatacatcttgacctctcctacatccccttctccggtacactgccacccctgcttagcaaccttaccaacttggaatatctcgacctctccttcacatcattttctggtacacttcctcctcagctgggcaacctttcaaatttacggtatcttgatgttagtgagatgcagaatgtagtgtattcgactgacctctcatggttaagtcgtctgcatttgttagagtatattgacatgagcaatactattctcagcaaaataacgaatttgcctgccgtgctcaacaagatcccaactctaaagcatgtcctccttttgaattgttcaattccaagtgcaaaccaatccatcacacacctaaaccttacccagcttgaggagcttgatctctctctcaactactttggccatccaatttcatcatgctggttttggaaagtaacaagcatcaagtcgctccgcctagatgaaacctatctccatggtcccttccctgacgagctaggcgaaatggtgtcgctccaacacctagatttttgtttcaatggaaatgcagccacaatgactgtggacttgaacaacttatgtgacctggaaagcatataccttgacaagagtctctcatccgggaacataacagatttgatggataagttacagtgttccagcaaattgtatagcttgagttctataagcaataatatgataggaatgcttccaagtagtatagagcacttcaccagcttaaatcacattgatcttactaacaacagtgtcagtggagtcatgccacgaggatttcagaacatggctaatttggagtacctacatctcagttccaatcgactcagtggccagatgcccttgttaccgacaagcctcaagatattgcatgcccaaatgaacttcttgtcagggcatctcccgttggaatttagagccccaaatcttgaaaacctaattatatcctccaattacattactggccaagttcctggatctatttgtgagtcagaaaacatgaaacacttggatttgtcaaacaatttatttgagggagaagtacctcactgtcgtcgtatgcgaaacttacgtttcctgctcttaagtaacaacagcttctctggaaagtttccccaatggatccaaagcttctcttcactggttttcctagatctttcatggaacatgttctatggttcgttaccaaggtggattggagacttggtgaccttgcgtattctgcacctgggtcataacatgttcaatggagatattccagtcaacatcacacatcttacacaacttcaatacctgaatttagcagacaataatatatcaggtttaattcctctatctttgtcacattttaatgaaatgactctaaaagctgtgggtgattcaatctcgaccctggcatttgatgagtcatttgatacattttccctcggaatgaagcatcaaatactcaagtatggatcacatggggtcgttgatatggttggaatcgacttatcgctcaatcgcataaccggtggaattccagaggaaataacatctctcgatagattgtctaatttaaatttatcatggaatcgcttgagtgggaaaattccggagaacattgggtctatgaaatcaatagaatcactcgacctctcaaggaactacctttgtggtgaagtcccatcaagcttgacagatcttacatatttaagctacctggacctatcgtacaacaatcttactggaaaagttccatccggacgccaacttgacaccttgtacttagagaatccatccatgtacaatggaaacattggtctttgtggccctcctcttcaaaggaattgttcaagcaatggttatgcacaagggcatggtgatcacaaaggacaagagaaggattccaattcaatgttcttttactatggtcttgcatcaggttttgttgttggttattgggttgtgttttgtgctctgctattccacaagtcatggagagtcacttatttctgccttgtggacaaggtatatgacaagttatatgtgtatgtggtcattacttggaccagatggatgaacactacaaattaattaagcacagtaaggaaatgtgttactagc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0120300, RefSeq:Os10g0120300