Os04g0530700
| Gene Name |
Os04g0530700 |
|---|---|
| Description |
Similar to Beta-D-xylosidase |
| Version |
NM_001059927.1 GI:115459583 GeneID:4336485 |
| Length |
3677 bp |
| Definition |
Oryza sativa Japonica Group Os04g0530700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:26941792..26945468 |
| Sequence Coding Region |
26941970..26942568,26942663..26943079,26943160..26943510,26943767..26943864,26943991..26944157 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:26941792..26945468 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:26941792..26945468 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtccaacgtccccttgctcctcctccttgtcgtcgctagcgccggcgcgggcgatggagccgcgccggcgtcgaatgcgcgcccgtgcgcctcgccggcggccagcgcctaccccttctgcaacgccaccctcccgttccctgcccgcgcgcgcgccctcgtctccctcctcaccctcgacgagaagatagcgcagctctccaacaccgccgcgggcgccccccgcctcggcgtcccgcccttcgagtggtggtcggagtccctccacggcgtctgcgacaacgggcccggggtcaacttctcctcgggccccgtccgctccgcgaccatcttcccccaggtcatcctctccgccgccgcgttcaaccgctcgctgtggcgcgcggcggcgcgggccatcgcggtggaggcgcgcgccatgcacaacgccggccaggccgggctcacgttctgggcgcccaacatcaacgtcttccgcgacccacggtggggccgcggccaggagacgccgggagaggaccccgccgtcgtctccgcctactccgtcgagtatgtgaaagggttccagcgggactacggagaggaaggcaggatgatgctctccgcctgctgcaagcactacatcgcttatgatttggagaaatggaggggctttacaagatacaccttcaatgccaaggttaatgcgcaagatatggaagacacataccagcctcctttcaagagctgcatccaggaaggtcgtgcaagttgcttgatgtgttcatacaaccaggtaaatggtgtgccagcatgtgcccgcaaagatatcctgcaaagggctagagatgaatggggtttccaggggtatattacatctgattgtgatgctgtggcaataattcacgaaaaccagacatacacagcatcagatgaagattcaattgccgttgttcttaaggcaggaatggatatcaactgtggttctttcctaattcgtcatacaaagtcggcaattgagaagggaaaggtccaagaagaagatatcaaccatgccctttttaatctattctctgttcagctccgtcttggtttttttgataagaccaatgagaatcagtggtttacacaattaggacccaacaatgtgtgcactacagagcatagggaacttgcagcagaagctgtaaggcagggtactgtccttttgaaaaatgataacggttttttgcctctaaagagaagtgaagttggtcatattgctcttattggaccagctgcaaatgatccatatatattaggcggtgactacacaggtgtcccttgtcattctaccacctttgttaaaggcatgcaagcatatgttcccaaaacaacctttgctgctggatgtaaggatgttccatgtaactcaacggatggatttggtgaagcgattgaagcagctaagagagctgatgttgttgttctaattgctgggttgaacctgactgaagaaacggaagatcatgatagagtgagccttctccttccaggcaggcagatggatctcatacatactgttgccagtgtaacaaagaaacccgttgtgttggtactcatgggtggtggtcctgttgatgtttcatttgcaaagcatgatccacgtattgcgagcattctttggattggttatcctggcgaggttggtggaaatgttcttccagaaatccttttcgggaaatacaacccaggaggaaagctgcccataacttggtaccctgaatccttcactgctgttccgatggatgatatgaacatgagagctgatgcgtcacgtggttacccaggaagaacatacagattttacactggagatgtagtatatgggtttgggtatggtttgagctactcaaaatattcgtacagcatcttgcaggccccaaagaaaatcagcttgtcccgttcgtcagttccagatcttatcagcagaaagcctgcatacacaaggagggatggagtagattatgtccaagttgaagacattgcctcatgcgaggcgctgcaatttcctgttcacatctcggtttccaacgatggtgccatggacgggagccatgccgttctattgttcgcgagttcgaaaccaagctttccaggatcccctataaaacagctagttggctttgagcgtgtgcacactgccgctggcagatcaaccgatgtggagatcaccgtcgacccctgcaagcttatgagctttgccaacaccgaaggcacaagggtgctgttcctgggaacacatgttctgatggtgggagacgaagagcacgagttgctcatcgaggcatga</cdnaseq> |
| Protein Sequence |
<aaseq>MSNVPLLLLLVVASAGAGDGAAPASNARPCASPAASAYPFCNAT LPFPARARALVSLLTLDEKIAQLSNTAAGAPRLGVPPFEWWSESLHGVCDNGPGVNFS SGPVRSATIFPQVILSAAAFNRSLWRAAARAIAVEARAMHNAGQAGLTFWAPNINVFR DPRWGRGQETPGEDPAVVSAYSVEYVKGFQRDYGEEGRMMLSACCKHYIAYDLEKWRG FTRYTFNAKVNAQDMEDTYQPPFKSCIQEGRASCLMCSYNQVNGVPACARKDILQRAR DEWGFQGYITSDCDAVAIIHENQTYTASDEDSIAVVLKAGMDINCGSFLIRHTKSAIE KGKVQEEDINHALFNLFSVQLRLGFFDKTNENQWFTQLGPNNVCTTEHRELAAEAVRQ GTVLLKNDNGFLPLKRSEVGHIALIGPAANDPYILGGDYTGVPCHSTTFVKGMQAYVP KTTFAAGCKDVPCNSTDGFGEAIEAAKRADVVVLIAGLNLTEETEDHDRVSLLLPGRQ MDLIHTVASVTKKPVVLVLMGGGPVDVSFAKHDPRIASILWIGYPGEVGGNVLPEILF GKYNPGGKLPITWYPESFTAVPMDDMNMRADASRGYPGRTYRFYTGDVVYGFGYGLSY SKYSYSILQAPKKISLSRSSVPDLISRKPAYTRRDGVDYVQVEDIASCEALQFPVHIS VSNDGAMDGSHAVLLFASSKPSFPGSPIKQLVGFERVHTAAGRSTDVEITVDPCKLMS FANTEGTRVLFLGTHVLMVGDEEHELLIEA</aaseq> |
| Gene Sequence |
<dnaseqindica>2901..3499#2390..2806#1959..2309#1605..1702#1312..1478#35..715#agtgtgctcagccaaattcggccccaaacccgccatgtccaacgtccccttgctcctcctccttgtcgtcgctagcgccggcgcgggcgatggagccgcgccggcgtcgaatgcgcgcccgtgcgcctcgccggcggccagcgcctaccccttctgcaacgccaccctcccgttccctgcccgcgcgcgcgccctcgtctccctcctcaccctcgacgagaagatagcgcagctctccaacaccgccgcgggcgccccccgcctcggcgtcccgcccttcgagtggtggtcggagtccctccacggcgtctgcgacaacgggcccggggtcaacttctcctcgggccccgtccgctccgcgaccatcttcccccaggtcatcctctccgccgccgcgttcaaccgctcgctgtggcgcgcggcggcgcgggccatcgcggtggaggcgcgcgccatgcacaacgccggccaggccgggctcacgttctgggcgcccaacatcaacgtcttccgcgacccacggtggggccgcggccaggagacgccgggagaggaccccgccgtcgtctccgcctactccgtcgagtatgtgaaagggttccagcgggactacggagaggaaggcaggatgatgctctccgcctgctgcaagcactacatcgcttatgatttggagaaatggaggggctttacaagatacaccttcaatgccaaggtgatgaatgttttggtcccttcacaatccacttaccaattttgcttcttgatggaggagtagctgaccttattagatttgctcggtagttagtcccttacggtatatgccttcatttaatttttggggtccccttaattatgccagacacaacagcagcgctcatgcttacacagttgaatcttctgaacttgtgcaaacatgctaataatagaatattggatatcatactagcacagtactcgaccagtccatatgcacacaaaaatttcatgcggattcaccttcatgaagtaaaagtttcaaagtgggtgcatctgttgtgtagccctttccttctccttattaacacatagatctcctgcaagttctttaaaaaagagtagtctatcctgatgctaatgagatattgaatcaataaatggattgatccttcagttgaaaatttccttttcctgttgtttggtgtgcaatattcaaccaaagtatcaaaacgcattcttcttttttacattaatcagaatgcaagcttggaatcaggttaagaatgttttgatttttgaacctataagcaagaaggcattagttattgacaggttaatgcgcaagatatggaagacacataccagcctcctttcaagagctgcatccaggaaggtcgtgcaagttgcttgatgtgttcatacaaccaggtaaatggtgtgccagcatgtgcccgcaaagatatcctgcaaagggctagagatgaatggggtttccaggggtatactactttctcttgcccagaacattacttgatccttgaatactgatattggcagaaaaaaaaatcctaatatcaacccaaacctgcactactgtttatgtgtgcccatttgattatttgaaggtatattacatctgattgtgatgctgtggcaataattcacgaaaaccagacatacacagcatcagatgaagattcaattgccgttgttcttaaggcaggttggtggcctgtgacattctctctctctgtaacaagttgctgtctttgtagactaggagtttgacttctcaaagaacttttctgctcaataagcaatttcaaatcatatattaggggacacctgtgtaaagtttcagcaccttcttgaaattgaaatatctgagaaccactccggagtcctgagtacccttcaagcaagcctataaaatttcttgctgaggtgctatcgatgactgatccttttttttcttcaaggaatggatatcaactgtggttctttcctaattcgtcatacaaagtcggcaattgagaagggaaaggtccaagaagaagatatcaaccatgccctttttaatctattctctgttcagctccgtcttggtttttttgataagaccaatgagaatcagtggtttacacaattaggacccaacaatgtgtgcactacagagcatagggaacttgcagcagaagctgtaaggcagggtactgtccttttgaaaaatgataacggttttttgcctctaaagagaagtgaagttggtcatattgctcttattggaccagctgcaaatgatccatatatattaggcggtgactacacaggtttttaccactgacatcaataaaaaatctgtcttactttactgttttacatacattaatggtaattttaatttctccaggtgtcccttgtcattctaccacctttgttaaaggcatgcaagcatatgttcccaaaacaacctttgctgctggatgtaaggatgttccatgtaactcaacggatggatttggtgaagcgattgaagcagctaagagagctgatgttgttgttctaattgctgggttgaacctgactgaagaaacggaagatcatgatagagtgagccttctccttccaggcaggcagatggatctcatacatactgttgccagtgtaacaaagaaacccgttgtgttggtactcatgggtggtggtcctgttgatgtttcatttgcaaagcatgatccacgtattgcgagcattctttggattggttatcctggcgaggttggtggaaatgttcttccagaaatccttttcgggaaatacaacccaggtgagtaaataaatttcttataaagaaaagctcatttgagtgcagtgtagtgaaaacttgcagcggttgctaatcttgtgcactgttattataggaggaaagctgcccataacttggtaccctgaatccttcactgctgttccgatggatgatatgaacatgagagctgatgcgtcacgtggttacccaggaagaacatacagattttacactggagatgtagtatatgggtttgggtatggtttgagctactcaaaatattcgtacagcatcttgcaggccccaaagaaaatcagcttgtcccgttcgtcagttccagatcttatcagcagaaagcctgcatacacaaggagggatggagtagattatgtccaagttgaagacattgcctcatgcgaggcgctgcaatttcctgttcacatctcggtttccaacgatggtgccatggacgggagccatgccgttctattgttcgcgagttcgaaaccaagctttccaggatcccctataaaacagctagttggctttgagcgtgtgcacactgccgctggcagatcaaccgatgtggagatcaccgtcgacccctgcaagcttatgagctttgccaacaccgaaggcacaagggtgctgttcctgggaacacatgttctgatggtgggagacgaagagcacgagttgctcatcgaggcatgacaaagaggttacctttgtgtcacatctgccgtctctacagtccggagttcaagtctgggacagcaagtttacacttgtacacctgtacaagaagtgtcctgtaaagatttattggatgcaaaaaagattgctcattgcagcaaaatttatgacatcaataaaatctggcaaactgttc</dnaseqindica> |
| External Link(s) |
