Os04g0532800

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Revision as of 11:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0532800| Description = Myb, DNA-binding domain containing protein| Version = NM_001059941.1 GI:115459611 GeneID:4336500| Length = 2543 bp| ...")
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Gene Name

Os04g0532800

Description

Myb, DNA-binding domain containing protein

Version

NM_001059941.1 GI:115459611 GeneID:4336500

Length

2543 bp

Definition

Oryza sativa Japonica Group Os04g0532800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27036671..27039213

Sequence Coding Region

27036859..27036994,27037327..27037456,27038359..27038914

Expression

GEO Profiles:Os04g0532800

Genome Context

<gbrowseImage1> name=NC_008397:27036671..27039213 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27036671..27039213 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtgcaaggcgtgccagaagcccaaggtgcactaccggaagggcctgtggtcgccggaggaggaccagaagctccgcgacttcatcctccgctacggccacggctgctggagcgccgtccccgtgaaggccgggctgcagcgtaacggcaagagttgcaggctgagatggatcaattacctgaggccggggctgaagcacggcatgttttcccgagaggaagaagaaaccgtcatgaacctgcacgctacaatgggcaacaagtggtcacagatagcgcggcatctgcctggccggacggacaacgaggtgaagaactactggaactcgtacctcaagaagcgagtcgaaggcgcggaggctgcggccagaaaatccgccgagccggccgacgtcgtcaccggcagcccgaaccgcagcgagaccggccaagaacgcgtcgccgctgaccggccggcgagctccgagtcttccgggccggtcgagtcgtcgtcggccgacgactcgagcagcctcaccgagcccgcggcggggctcgccgccgtccggccgcacgcgcccgtgatccccaaggtcatgttcgccgactggttcgacatggactacgggactagcctcgccgggacggcgccgggcctgagctaccagggctcgtcgtcggtgcaggtcgacgtcccgtgcggcggcgccgtggactccctgcacgggctgggcgacggcggcttctgctgggacttcgacgacgcggccgatcacatgcagggaggaggagggctctgcgacctgctctccatgagcgagttcctcggcatcaactag</cdnaseq>

Protein Sequence

<aaseq>MGCKACQKPKVHYRKGLWSPEEDQKLRDFILRYGHGCWSAVPVK AGLQRNGKSCRLRWINYLRPGLKHGMFSREEEETVMNLHATMGNKWSQIARHLPGRTD NEVKNYWNSYLKKRVEGAEAAARKSAEPADVVTGSPNRSETGQERVAADRPASSESSG PVESSSADDSSSLTEPAAGLAAVRPHAPVIPKVMFADWFDMDYGTSLAGTAPGLSYQG SSSVQVDVPCGGAVDSLHGLGDGGFCWDFDDAADHMQGGGGLCDLLSMSEFLGIN</aaseq>

Gene Sequence

<dnaseqindica>189..324#657..786#1689..2244#gcagaccgacacaacagtgcaggccgcaaagcaatcacggccgtccaagcaagccgcctcctcctcctccttaccaagccaaagtcttcttctgctttcttttcccctcgtgctgctcgcggtttggcattgtctctctagagtctagactctagagtctcctcttgctctcttctcgtccgccattgatggggtgcaaggcgtgccagaagcccaaggtgcactaccggaagggcctgtggtcgccggaggaggaccagaagctccgcgacttcatcctccgctacggccacggctgctggagcgccgtccccgtgaaggccggtaagaccacggttccgagctccgcctgcgacgatttcgccggggaattcaccgcgaattttgcaactgctgtacgcctgaatgcattgcacctgtgtcctgcttcaaaacccccctgtttgcttgttgctgctctcgtttttttcttttttttttcaaatgcaccttgatttaagggaaggggagaagggattttttttgtttcctactatttgcaaagtgttgttcagcttcaggacgatagatgaagcctgtttgagcttttgtgttttttcgtcaaatgtaccttgtctggtgagctgaattctcttctgaatttgcctttcatgcagggctgcagcgtaacggcaagagttgcaggctgagatggatcaattacctgaggccggggctgaagcacggcatgttttcccgagaggaagaagaaaccgtcatgaacctgcacgctacaatgggcaacaagtaagtgtcacacttttcaccttacctttagagccaggagattgctgtcaagtaacgctaattaatttagcaaagtaattactccaacagagagtaattttggacatcctaccttctgcctttttactctttttttttcttttactactactgcactttgctagtgtcagctcggcaaattcagtttcagagtggaaaagggcctggttaagtaagaacaaaaggaaatgctgattttggccatctagaccgcttttgagtggtgtagttgatgctgacatctacgttccatattgaggcaatcaattgcttcttttttccggtgcacatttgatgattgtgaacaaccatcttcctctgattaatttatttgctgaaaggcgtgcttagtcacggttaaccttttcttagcataaaagaaatgggggaaaaatcagtgtctgattcctctctccccctcttgagaaaaatactaacgcattttctggaggtgatgtggttgcttactggtgcaaatgcaagttgccagctatttttgcactcttctttagtcctggttccatcgtcagaaatcttaacaccgtccttagacaccaacagtctgtacaatctcatttatgaacatggacgtacggcaactgctgtactacaatcagactaatcacagttcactgagaattatggaaacctctgctttgacgaaacctagaaaagatcaacgtgtggtactactatgacaataaaagatcctttattagactgactgtgcaatagtaattcgaaaaaaaaaagattaagaaggcgattataagttatactagataagaaatacttttatctaactttttttgtttgaaactaggacttttatctaacatggtgatggaaatttgtggttgcaggtggtcacagatagcgcggcatctgcctggccggacggacaacgaggtgaagaactactggaactcgtacctcaagaagcgagtcgaaggcgcggaggctgcggccagaaaatccgccgagccggccgacgtcgtcaccggcagcccgaaccgcagcgagaccggccaagaacgcgtcgccgctgaccggccggcgagctccgagtcttccgggccggtcgagtcgtcgtcggccgacgactcgagcagcctcaccgagcccgcggcggggctcgccgccgtccggccgcacgcgcccgtgatccccaaggtcatgttcgccgactggttcgacatggactacgggactagcctcgccgggacggcgccgggcctgagctaccagggctcgtcgtcggtgcaggtcgacgtcccgtgcggcggcgccgtggactccctgcacgggctgggcgacggcggcttctgctgggacttcgacgacgcggccgatcacatgcagggaggaggagggctctgcgacctgctctccatgagcgagttcctcggcatcaactaggcgggagcgtacgctctttcttccgtacagttcgtcgccgaagtgtaaattcgtcagtttcttttttttccccctctttttcagaggtgtaaatcgtgccgtgcatgtgtagtagttaaacttactggcttgtagtgttgagtttggacttcgaagccatgagttgtgcgtcgaagtacagtcttagctttctcttcataaggttcgtgacttcgtgtatacagctctggttttccggaaaacggttcagaaagaataacagaaacagagcgtcacaattgcacggttttcaggctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0532800, RefSeq:Os04g0532800