Os04g0535200

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Revision as of 11:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0535200| Description = Peptidase A1, pepsin family protein| Version = NM_001059955.1 GI:115459639 GeneID:4336513| Length = 1823 bp| Defini...")
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Gene Name

Os04g0535200

Description

Peptidase A1, pepsin family protein

Version

NM_001059955.1 GI:115459639 GeneID:4336513

Length

1823 bp

Definition

Oryza sativa Japonica Group Os04g0535200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27155879..27157701

Sequence Coding Region

27155920..27157398

Expression

GEO Profiles:Os04g0535200

Genome Context

<gbrowseImage1> name=NC_008397:27155879..27157701 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27155879..27157701 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcctccaactctgcttcctctgcttcggcttgcttctcgtctcctcctcgctgcaatgccacgggctgcttctgccgctcaccaacaccctctcctcgctccgcccagccaatgacaccgccaccatccaccgcctcctccgctcctcctccctccgttccgccgcgcgccaccgcggccgccgccacggcacgcgccgcgcgcctcctcctccacggcaccgccagctctcgctgccgctcgcgccggggagcgactacacgctgtcgctctcggtcggcccgccttccacggccagctccgtgtcgctcttcctcgacaccggcagcgacctcgtctggttcccctgcgcgccgttcacctgcatgctctgcgaaggcaaggcgacgcctggtggcaaccactccagcccgctccccccaccgatcgactcccgccgcatctcctgcgcgtcgccgctctgctccgcggcgcactcctccgcgcccacctccgacctgtgcgccgcggcgcggtgcccgctcgacgcgatcgagaccgactcgtgcgcgtcccacgcgtgcccgccgctgtactacgcgtacggggacggcagcctcgtcgcgaacctgaggcgcggacgcgtcgggctggccgcgtccatggccgtggagaacttcaccttcgcctgcgcgcacacggcgctcgccgagcccgtcggggtggccgggttcgggcgcggcccgctctcgctcccggcccagctcgccccgtcgctctccggcaggttttcctactgcctcgtcgcccactcattccgcgccgaccggctcatccggtcaagcccgctgatcctcggccgcagcacggacgccgccgcgatcggcgcctccgagacggacttcgtgtacacgccgctgctgcacaacccgaagcacccctacttctactcggtggcgctcgaagccgtctcggtgggcgggaagaggatacaggcccagcccgagctcggggacgtggaccgcgacggcaacggcgggatggtggtggactcgggcacgacgttcaccatgctgccgagcgacacgttcgcgcgggtggccgacgagttcgcgcgcgcgatggccgcggcgcggttcacgcgcgccgagggcgcggaggcccagacagggctcgccccctgctaccactactccccgtcggaccgcgccgtgccgccggtggcgctccacttccgtggcaacgcgacggtggcgctgccgcggaggaactacttcatggggttcaagagcgaggaggggcggagcgtcgggtgcctgatgctgatgaacgtcggcgggaacaacgacgacggcgaagacggtggtggtccggcagggacgcttggcaacttccagcagcaggggttcgaggtggtgtacgacgtggacgccggtcgcgtcggcttcgcccgccgccggtgtacggacctgtgggacacgctctcgcgccggtga</cdnaseq>

Protein Sequence

<aaseq>MRLQLCFLCFGLLLVSSSLQCHGLLLPLTNTLSSLRPANDTATI HRLLRSSSLRSAARHRGRRHGTRRAPPPPRHRQLSLPLAPGSDYTLSLSVGPPSTASS VSLFLDTGSDLVWFPCAPFTCMLCEGKATPGGNHSSPLPPPIDSRRISCASPLCSAAH SSAPTSDLCAAARCPLDAIETDSCASHACPPLYYAYGDGSLVANLRRGRVGLAASMAV ENFTFACAHTALAEPVGVAGFGRGPLSLPAQLAPSLSGRFSYCLVAHSFRADRLIRSS PLILGRSTDAAAIGASETDFVYTPLLHNPKHPYFYSVALEAVSVGGKRIQAQPELGDV DRDGNGGMVVDSGTTFTMLPSDTFARVADEFARAMAAARFTRAEGAEAQTGLAPCYHY SPSDRAVPPVALHFRGNATVALPRRNYFMGFKSEEGRSVGCLMLMNVGGNNDDGEDGG GPAGTLGNFQQQGFEVVYDVDAGRVGFARRRCTDLWDTLSRR</aaseq>

Gene Sequence

<dnaseqindica>42..1520#aaacccgagcattccaccgtgcgcgaaagcgccccgtcaccatgcgcctccaactctgcttcctctgcttcggcttgcttctcgtctcctcctcgctgcaatgccacgggctgcttctgccgctcaccaacaccctctcctcgctccgcccagccaatgacaccgccaccatccaccgcctcctccgctcctcctccctccgttccgccgcgcgccaccgcggccgccgccacggcacgcgccgcgcgcctcctcctccacggcaccgccagctctcgctgccgctcgcgccggggagcgactacacgctgtcgctctcggtcggcccgccttccacggccagctccgtgtcgctcttcctcgacaccggcagcgacctcgtctggttcccctgcgcgccgttcacctgcatgctctgcgaaggcaaggcgacgcctggtggcaaccactccagcccgctccccccaccgatcgactcccgccgcatctcctgcgcgtcgccgctctgctccgcggcgcactcctccgcgcccacctccgacctgtgcgccgcggcgcggtgcccgctcgacgcgatcgagaccgactcgtgcgcgtcccacgcgtgcccgccgctgtactacgcgtacggggacggcagcctcgtcgcgaacctgaggcgcggacgcgtcgggctggccgcgtccatggccgtggagaacttcaccttcgcctgcgcgcacacggcgctcgccgagcccgtcggggtggccgggttcgggcgcggcccgctctcgctcccggcccagctcgccccgtcgctctccggcaggttttcctactgcctcgtcgcccactcattccgcgccgaccggctcatccggtcaagcccgctgatcctcggccgcagcacggacgccgccgcgatcggcgcctccgagacggacttcgtgtacacgccgctgctgcacaacccgaagcacccctacttctactcggtggcgctcgaagccgtctcggtgggcgggaagaggatacaggcccagcccgagctcggggacgtggaccgcgacggcaacggcgggatggtggtggactcgggcacgacgttcaccatgctgccgagcgacacgttcgcgcgggtggccgacgagttcgcgcgcgcgatggccgcggcgcggttcacgcgcgccgagggcgcggaggcccagacagggctcgccccctgctaccactactccccgtcggaccgcgccgtgccgccggtggcgctccacttccgtggcaacgcgacggtggcgctgccgcggaggaactacttcatggggttcaagagcgaggaggggcggagcgtcgggtgcctgatgctgatgaacgtcggcgggaacaacgacgacggcgaagacggtggtggtccggcagggacgcttggcaacttccagcagcaggggttcgaggtggtgtacgacgtggacgccggtcgcgtcggcttcgcccgccgccggtgtacggacctgtgggacacgctctcgcgccggtgagctgctggtgcggacttacgatgatcgagtatgatttgtcctaagctctcaggtgtacagagtacagactagtggtagctgccatgcatgtatctgtaggattgttcttcttgcgacgttactgttttgtttctcgtgtttctgcttgtaaatctgtcttgctctgcccgtatggaacctgattaacgattaaccgatggcaacgactcggacggcgagacatgtctccacacgggtttttgctaccaacagagaaactgcagtaaacaaactcgaacctttggcacatttgatgcaagaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0535200, RefSeq:Os04g0535200